Variant report

Variant	rs9836451
Chromosome Location	chr3:34989422-34989423
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs6777980	0.82[AMR][1000 genomes]
rs7355832	0.91[AMR][1000 genomes]
rs940046	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs9883829	0.91[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876686	chr3:34967346-35075355	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:34988400-34990200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr3:34988600-34990200	Enhancers	Fetal Heart	heart
3	chr3:34988600-34991200	Enhancers	NH-A	brain
4	chr3:34988800-34989600	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr3:34988800-34990200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr3:34989000-34990000	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr3:34989000-34990000	Weak transcription	Fetal Muscle Leg	muscle
8	chr3:34989000-34990400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr3:34989000-34990600	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr3:34989200-34990200	Enhancers	Adipose Nuclei	Adipose
11	chr3:34989400-34989600	Enhancers	Aorta	Aorta
12	chr3:34989400-34989800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr3:34989400-34989800	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr3:34989400-34989800	Enhancers	iPS-20b Cell Line	embryonic stem cell
15	chr3:34989400-34990000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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