The 2.0 version of rSNPBase

Variant report

Variant rs9850934
Chromosome Location chr3:56827452-56827453
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56807000-56833200 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:56818200-56829400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr3:56818600-56829000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:56818600-56832000 Weak transcription Rectal Smooth Muscle rectum
5 chr3:56819000-56829000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:56819000-56830400 Weak transcription HSMM muscle
7 chr3:56819200-56834400 Weak transcription Fetal Muscle Trunk muscle
8 chr3:56819600-56829000 Weak transcription Placenta Placenta
9 chr3:56819800-56828000 Enhancers Primary T cells fromperipheralblood blood
10 chr3:56820400-56829000 Weak transcription Fetal Kidney kidney
11 chr3:56820600-56834600 Weak transcription NHDF-Ad bronchial
12 chr3:56820800-56828000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr3:56821000-56830400 Weak transcription Fetal Brain Female brain
14 chr3:56821600-56829000 Weak transcription Small Intestine intestine
15 chr3:56822400-56827600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr3:56822400-56829000 Weak transcription Adipose Nuclei Adipose
17 chr3:56822400-56833200 Weak transcription Fetal Stomach stomach
18 chr3:56822800-56833200 Weak transcription Duodenum Mucosa Duodenum
19 chr3:56823400-56828200 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr3:56823400-56829600 Weak transcription Fetal Brain Male brain
21 chr3:56823400-56833200 Weak transcription Fetal Muscle Leg muscle
22 chr3:56823600-56829000 Weak transcription Stomach Mucosa stomach
23 chr3:56824400-56829200 Weak transcription Esophagus oesophagus
24 chr3:56824600-56829000 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr3:56824600-56829000 Weak transcription Colon Smooth Muscle Colon
26 chr3:56824600-56830200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr3:56824800-56829000 Weak transcription Fetal Lung lung
28 chr3:56824800-56829000 Weak transcription HMEC breast
29 chr3:56824800-56829800 Weak transcription Right Ventricle heart
30 chr3:56825000-56829000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:56825000-56831800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr3:56825200-56829200 Weak transcription Hela-S3 cervix
33 chr3:56825200-56829400 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr3:56825200-56832000 Weak transcription Brain Substantia Nigra brain
35 chr3:56825400-56829600 Weak transcription Primary B cells from peripheral blood blood
36 chr3:56825400-56831800 Weak transcription NHEK skin
37 chr3:56825600-56828000 Weak transcription Thymus Thymus
38 chr3:56825600-56830000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr3:56825600-56830400 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr3:56825600-56832400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr3:56825800-56830400 Weak transcription Lung lung
42 chr3:56826000-56828000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr3:56826200-56828200 Weak transcription Primary hematopoietic stem cells blood
44 chr3:56826200-56828400 Genic enhancers Primary T helper cells fromperipheralblood blood
45 chr3:56826400-56833200 Weak transcription Stomach Smooth Muscle stomach
46 chr3:56826600-56827600 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr3:56826600-56828600 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr3:56826600-56828800 Weak transcription Fetal Thymus thymus
49 chr3:56826600-56829000 Weak transcription Left Ventricle heart
50 chr3:56826600-56829000 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015