The 2.0 version of rSNPBase

Variant report

Variant rs9854926
Chromosome Location chr3:17077236-17077237
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17053600-17080600 Weak transcription Fetal Muscle Leg muscle
2 chr3:17053800-17086800 Weak transcription Fetal Stomach stomach
3 chr3:17055400-17088800 Weak transcription Thymus Thymus
4 chr3:17055600-17079800 Weak transcription Small Intestine intestine
5 chr3:17055800-17087800 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr3:17057600-17080600 Weak transcription Duodenum Mucosa Duodenum
7 chr3:17058600-17082400 Weak transcription Fetal Intestine Large intestine
8 chr3:17060000-17082200 Weak transcription Fetal Intestine Small intestine
9 chr3:17060000-17088600 Weak transcription Pancreas Pancrea
10 chr3:17060200-17081000 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr3:17065600-17081200 Weak transcription Brain Inferior Temporal Lobe brain
12 chr3:17069400-17085600 Weak transcription Aorta Aorta
13 chr3:17069600-17080800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr3:17070000-17093600 Weak transcription Fetal Lung lung
15 chr3:17071400-17079800 Weak transcription Lung lung
16 chr3:17071400-17080600 Weak transcription Gastric stomach
17 chr3:17071800-17080600 Weak transcription Primary T cells fromperipheralblood blood
18 chr3:17072200-17079800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr3:17072800-17080200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr3:17072800-17080600 Weak transcription Esophagus oesophagus
21 chr3:17072800-17085600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr3:17073000-17078400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr3:17073000-17080200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr3:17073000-17088800 Weak transcription Right Atrium heart
25 chr3:17073000-17093000 Weak transcription Spleen Spleen
26 chr3:17073200-17080600 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr3:17073200-17085200 Weak transcription Placenta Placenta
28 chr3:17073200-17085400 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr3:17074000-17077400 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr3:17074000-17084400 Weak transcription Liver Liver
31 chr3:17074200-17077400 Enhancers Primary neutrophils fromperipheralblood blood
32 chr3:17074400-17078800 Weak transcription Stomach Mucosa stomach
33 chr3:17074400-17079800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr3:17074800-17077600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr3:17074800-17080600 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr3:17075000-17077800 Enhancers Primary hematopoietic stem cells blood
37 chr3:17075000-17077800 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr3:17075000-17079800 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr3:17075400-17080400 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr3:17075600-17078800 Enhancers Left Ventricle heart
41 chr3:17075800-17080200 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr3:17075800-17080400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr3:17075800-17080600 Weak transcription Muscle Satellite Cultured Cells --
44 chr3:17075800-17081000 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr3:17076400-17077400 Enhancers Psoas Muscle Psoas
46 chr3:17076400-17085600 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr3:17076600-17078400 Weak transcription Primary T cells from cord blood blood
48 chr3:17076600-17086800 Weak transcription Dnd41 blood
49 chr3:17076800-17077800 Strong transcription GM12878-XiMat blood
50 chr3:17076800-17085200 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015