Variant report

Variant rs9863553
Chromosome Location chr3:195619254-195619255
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195589400-195621800 Weak transcription Small Intestine intestine
2 chr3:195589800-195619600 Strong transcription Primary hematopoietic stem cells short term culture blood
3 chr3:195604800-195621600 Weak transcription A549 lung
4 chr3:195605600-195620000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr3:195606400-195621000 Weak transcription Hela-S3 cervix
6 chr3:195606600-195620600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr3:195609200-195621000 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr3:195611000-195620600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr3:195612800-195621800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr3:195613600-195621600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr3:195613800-195619400 Weak transcription Stomach Mucosa stomach
12 chr3:195615000-195621200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr3:195615400-195619400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
14 chr3:195615400-195619800 Weak transcription Primary hematopoietic stem cells blood
15 chr3:195615400-195619800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr3:195615400-195620000 Weak transcription Primary B cells from cord blood blood
17 chr3:195615400-195620400 Weak transcription GM12878-XiMat blood
18 chr3:195615400-195620600 Weak transcription Dnd41 blood
19 chr3:195615400-195621200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr3:195615600-195620000 Weak transcription Thymus Thymus
21 chr3:195615800-195620200 Weak transcription NHEK skin
22 chr3:195616400-195620400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:195616800-195619800 Active TSS HSMM muscle
24 chr3:195617000-195619400 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr3:195617000-195619800 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr3:195617000-195619800 Weak transcription K562 blood
27 chr3:195617000-195621000 Flanking Active TSS Fetal Muscle Trunk muscle
28 chr3:195617200-195619800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr3:195617200-195619800 Active TSS HSMMtube muscle
30 chr3:195617400-195619400 Strong transcription Primary B cells from peripheral blood blood
31 chr3:195617600-195620400 Flanking Active TSS Fetal Muscle Leg muscle
32 chr3:195617600-195624400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
33 chr3:195618000-195619600 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr3:195618200-195619600 Flanking Active TSS Adipose Nuclei Adipose
35 chr3:195618200-195619600 Flanking Active TSS Brain Hippocampus Middle brain
36 chr3:195618200-195620000 Flanking Active TSS Liver Liver
37 chr3:195618200-195620200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr3:195618200-195620600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
39 chr3:195618200-195621200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr3:195618400-195619400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr3:195618400-195619400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr3:195618400-195619400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
43 chr3:195618400-195619400 Flanking Active TSS Fetal Heart heart
44 chr3:195618400-195619400 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
45 chr3:195618400-195619600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
46 chr3:195618400-195619600 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
47 chr3:195618400-195619600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr3:195618400-195619600 Flanking Active TSS Fetal Stomach stomach
49 chr3:195618400-195619800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr3:195618400-195619800 Active TSS Right Atrium heart

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