Variant report

Variant rs9864989
Chromosome Location chr3:52684365-52684366
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52587200-52719200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:52591000-52688000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr3:52592200-52719200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr3:52634800-52686000 Strong transcription Duodenum Mucosa Duodenum
5 chr3:52636000-52703800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr3:52636000-52704000 Strong transcription Placenta Placenta
7 chr3:52636200-52703200 Strong transcription Primary monocytes fromperipheralblood blood
8 chr3:52636800-52703600 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr3:52637200-52715800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:52640800-52684600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr3:52642600-52711200 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr3:52643400-52691200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr3:52650000-52712200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr3:52655200-52716400 Strong transcription Fetal Thymus thymus
15 chr3:52655800-52684600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr3:52655800-52697600 Strong transcription Primary T cells fromperipheralblood blood
17 chr3:52655800-52704000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr3:52656600-52704600 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr3:52657000-52697200 Strong transcription Liver Liver
20 chr3:52657000-52697600 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr3:52658000-52702800 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr3:52660800-52704800 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr3:52664600-52701600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr3:52665400-52719200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr3:52666200-52702400 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr3:52670400-52704600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr3:52670800-52686000 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr3:52670800-52686200 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr3:52670800-52715400 Strong transcription Dnd41 blood
30 chr3:52671000-52697600 Strong transcription iPS-18 Cell Line embryonic stem cell
31 chr3:52671000-52697600 Strong transcription Skeletal Muscle Female skeletal muscle
32 chr3:52671000-52697800 Strong transcription Primary B cells from peripheral blood blood
33 chr3:52671000-52697800 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr3:52671000-52700800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
35 chr3:52671000-52701000 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr3:52671200-52698000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr3:52671200-52698000 Strong transcription Duodenum Smooth Muscle Duodenum
38 chr3:52672600-52686200 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr3:52673200-52686000 Strong transcription Fetal Lung lung
40 chr3:52673200-52697600 Strong transcription Primary B cells from cord blood blood
41 chr3:52673200-52702600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr3:52673400-52686000 Strong transcription Fetal Kidney kidney
43 chr3:52673600-52697800 Strong transcription HUVEC blood vessel
44 chr3:52676800-52686000 Strong transcription Colon Smooth Muscle Colon
45 chr3:52677600-52686600 Weak transcription Gastric stomach
46 chr3:52677800-52684400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr3:52677800-52688000 Weak transcription H9 Cell Line embryonic stem cell
48 chr3:52678800-52685800 Strong transcription Primary hematopoietic stem cells blood
49 chr3:52679000-52686000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr3:52680600-52685800 Strong transcription HMEC breast

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