Variant report

Variant rs9880039
Chromosome Location chr3:112912421-112912422
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112908400-112913000 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr3:112911000-112914000 Enhancers Placenta Amnion Placenta Amnion
3 chr3:112911000-112914800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr3:112911000-112915400 Enhancers Cortex derived primary cultured neurospheres brain
5 chr3:112911200-112913600 Enhancers iPS-18 Cell Line embryonic stem cell
6 chr3:112911200-112913800 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr3:112911200-112914200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr3:112911200-112914800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr3:112911400-112913200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:112911400-112913800 Enhancers HUES64 Cell Line embryonic stem cell
11 chr3:112911400-112914200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr3:112911400-112915200 Enhancers Colon Smooth Muscle Colon
13 chr3:112911600-112913200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr3:112911600-112913200 Enhancers iPS-20b Cell Line embryonic stem cell
15 chr3:112911800-112912800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr3:112911800-112913000 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr3:112911800-112913000 Enhancers HUES6 Cell Line embryonic stem cell
18 chr3:112911800-112913200 Enhancers H1 Cell Line embryonic stem cell
19 chr3:112911800-112913800 Enhancers HUES48 Cell Line embryonic stem cell
20 chr3:112911800-112914200 Enhancers Fetal Lung lung
21 chr3:112911800-112914800 Enhancers Fetal Stomach stomach
22 chr3:112911800-112915000 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr3:112911800-112915200 Enhancers Rectal Smooth Muscle rectum
24 chr3:112912000-112912800 Enhancers Fetal Heart heart
25 chr3:112912000-112913200 Enhancers Fetal Muscle Leg muscle
26 chr3:112912000-112914200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr3:112912200-112912600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr3:112912200-112912600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr3:112912200-112912600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
30 chr3:112912200-112912800 Enhancers NH-A brain
31 chr3:112912200-112914200 Enhancers NHEK skin
32 chr3:112912200-112914400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr3:112912200-112914800 Enhancers Stomach Smooth Muscle stomach
34 chr3:112912200-112917600 Weak transcription Psoas Muscle Psoas
35 chr3:112912400-112912800 Weak transcription Fetal Kidney kidney
36 chr3:112912400-112913400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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