Variant report

Variant	rs9880467
Chromosome Location	chr3:43828364-43828365
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs12330768	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876733	chr3:43768018-43854669	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43827000-43828400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:43827000-43828600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr3:43827000-43828800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr3:43827400-43828400	Enhancers	Primary hematopoietic stem cells	blood
5	chr3:43827400-43828600	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr3:43827600-43828600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr3:43828200-43828400	Bivalent Enhancer	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr3:43828200-43828600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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