Variant report

Variant rs9881760
Chromosome Location chr3:179372633-179372634
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179370000-179372800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr3:179370000-179372800 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr3:179370000-179373000 Active TSS ES-I3 Cell Line embryonic stem cell
4 chr3:179370000-179373200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
5 chr3:179370200-179372800 Active TSS Skeletal Muscle Female skeletal muscle
6 chr3:179370200-179373000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr3:179370200-179373000 Active TSS Left Ventricle heart
8 chr3:179370200-179373000 Active TSS NHLF lung
9 chr3:179370200-179373200 Active TSS Right Ventricle heart
10 chr3:179370200-179375000 Active TSS GM12878-XiMat blood
11 chr3:179371400-179373000 Active TSS Right Atrium heart
12 chr3:179371600-179373200 Flanking Active TSS Dnd41 blood
13 chr3:179371800-179373000 Flanking Active TSS Fetal Muscle Leg muscle
14 chr3:179372000-179372800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
15 chr3:179372000-179372800 Flanking Active TSS Osteobl bone
16 chr3:179372200-179372800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
17 chr3:179372200-179372800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr3:179372200-179372800 Flanking Active TSS Brain Germinal Matrix brain
19 chr3:179372200-179373000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr3:179372200-179373000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
21 chr3:179372200-179373000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr3:179372200-179373200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
23 chr3:179372200-179373200 Flanking Active TSS Fetal Brain Female brain
24 chr3:179372200-179376200 Weak transcription Aorta Aorta
25 chr3:179372200-179383800 Weak transcription Esophagus oesophagus
26 chr3:179372400-179372800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr3:179372400-179372800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:179372400-179372800 Enhancers Primary T helper cells fromperipheralblood blood
29 chr3:179372400-179372800 Weak transcription Liver Liver
30 chr3:179372400-179372800 Enhancers Duodenum Smooth Muscle Duodenum
31 chr3:179372400-179372800 Enhancers Placenta Placenta
32 chr3:179372400-179372800 Enhancers HMEC breast
33 chr3:179372400-179373000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
34 chr3:179372400-179373000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
35 chr3:179372400-179373000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr3:179372400-179373000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr3:179372400-179373000 Enhancers Primary T helper cells PMA-I stimulated --
38 chr3:179372400-179373000 Enhancers Ovary ovary
39 chr3:179372400-179373200 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr3:179372400-179373200 Enhancers Fetal Brain Male brain
41 chr3:179372400-179373200 Flanking Active TSS Hela-S3 cervix
42 chr3:179372400-179373200 Flanking Active TSS NHDF-Ad bronchial
43 chr3:179372400-179374200 Weak transcription Psoas Muscle Psoas
44 chr3:179372400-179374400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr3:179372400-179375800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr3:179372400-179376200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr3:179372400-179379600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:179372600-179372800 Active TSS iPS-15b Cell Line embryonic stem cell
49 chr3:179372600-179372800 Flanking Active TSS A549 lung
50 chr3:179372600-179373000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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