Variant report

Variant rs9885054
Chromosome Location chr5:114787261-114787262
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:114777200-114790600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:114785400-114788000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
3 chr5:114785400-114790400 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr5:114785400-114794600 Enhancers Fetal Intestine Small intestine
5 chr5:114785600-114796200 Enhancers Cortex derived primary cultured neurospheres brain
6 chr5:114785800-114787400 Enhancers Monocytes-CD14+_RO01746 blood
7 chr5:114786000-114787400 Enhancers Primary monocytes fromperipheralblood blood
8 chr5:114786000-114787400 Enhancers NH-A brain
9 chr5:114786000-114787400 Enhancers NHLF lung
10 chr5:114786000-114787600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr5:114786000-114787800 Enhancers Fetal Muscle Leg muscle
12 chr5:114786000-114787800 Enhancers Sigmoid Colon Sigmoid Colon
13 chr5:114786000-114788400 Enhancers Stomach Mucosa stomach
14 chr5:114786000-114789200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr5:114786000-114789400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr5:114786000-114789400 Enhancers Pancreas Pancrea
17 chr5:114786000-114789400 Enhancers NHDF-Ad bronchial
18 chr5:114786000-114790400 Enhancers Muscle Satellite Cultured Cells --
19 chr5:114786000-114794000 Enhancers Duodenum Mucosa Duodenum
20 chr5:114786000-114794400 Enhancers Rectal Mucosa Donor 31 rectum
21 chr5:114786000-114795800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr5:114786000-114796200 Enhancers Fetal Intestine Large intestine
23 chr5:114786200-114787400 Weak transcription Gastric stomach
24 chr5:114786400-114787400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:114786400-114791400 Enhancers Rectal Mucosa Donor 29 rectum
26 chr5:114786400-114795600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr5:114786600-114788600 Weak transcription Placenta Placenta
28 chr5:114786600-114789800 Enhancers Osteobl bone
29 chr5:114786600-114790400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr5:114786600-114790400 Weak transcription Brain Anterior Caudate brain
31 chr5:114786600-114790400 Weak transcription Brain Substantia Nigra brain
32 chr5:114786600-114790600 Weak transcription Brain Cingulate Gyrus brain
33 chr5:114786600-114791600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr5:114786600-114793400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr5:114786600-114795200 Weak transcription HSMMtube muscle
36 chr5:114786800-114788400 Weak transcription Small Intestine intestine
37 chr5:114786800-114789400 Enhancers Colonic Mucosa Colon
38 chr5:114786800-114790400 Weak transcription Brain Inferior Temporal Lobe brain
39 chr5:114786800-114791000 Weak transcription Brain Hippocampus Middle brain
40 chr5:114786800-114791000 Weak transcription Hela-S3 cervix
41 chr5:114786800-114792600 Weak transcription GM12878-XiMat blood
42 chr5:114786800-114793600 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr5:114786800-114794000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr5:114786800-114794800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:114786800-114796000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr5:114786800-114796400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr5:114787000-114790200 Weak transcription Adipose Nuclei Adipose
48 chr5:114787000-114790800 Weak transcription HMEC breast
49 chr5:114787000-114799400 Weak transcription Fetal Lung lung
50 chr5:114787200-114787400 Enhancers Skeletal Muscle Female skeletal muscle

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