Variant report

Variant rs9911879
Chromosome Location chr17:19990142-19990143
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19978800-20000000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr17:19980600-19994600 Weak transcription Primary hematopoietic stem cells blood
3 chr17:19981200-19993000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr17:19982600-19993000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr17:19983200-19993400 Weak transcription Spleen Spleen
6 chr17:19985600-19993000 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr17:19986200-19993000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr17:19986400-19990600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr17:19986400-19991400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr17:19987000-19994600 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr17:19987800-19990200 Enhancers NHDF-Ad bronchial
12 chr17:19988000-19990200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
13 chr17:19988000-19990200 Enhancers Ovary ovary
14 chr17:19988000-19991200 Enhancers Brain Angular Gyrus brain
15 chr17:19988200-19990200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr17:19988200-19990200 Enhancers Brain Anterior Caudate brain
17 chr17:19988200-19990200 Enhancers Brain Hippocampus Middle brain
18 chr17:19988200-19990200 Enhancers Brain Substantia Nigra brain
19 chr17:19988200-19990200 Enhancers Left Ventricle heart
20 chr17:19988200-19990200 Enhancers Skeletal Muscle Male skeletal muscle
21 chr17:19988200-19990200 Enhancers NH-A brain
22 chr17:19988200-19990400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
23 chr17:19988200-19990400 Enhancers Brain Inferior Temporal Lobe brain
24 chr17:19988200-19990400 Enhancers Fetal Muscle Trunk muscle
25 chr17:19988200-19990600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr17:19988200-19991000 Enhancers HSMMtube muscle
27 chr17:19988200-19991200 Enhancers Adipose Nuclei Adipose
28 chr17:19988200-19991200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr17:19988400-19990200 Enhancers Esophagus oesophagus
30 chr17:19988400-19990400 Enhancers Cortex derived primary cultured neurospheres brain
31 chr17:19988600-19990200 Strong transcription Primary monocytes fromperipheralblood blood
32 chr17:19988600-19993200 Weak transcription GM12878-XiMat blood
33 chr17:19988600-19994600 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr17:19988800-19991400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr17:19988800-19994600 Weak transcription Right Atrium heart
36 chr17:19989000-19990400 Enhancers Brain Cingulate Gyrus brain
37 chr17:19989000-19994600 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr17:19989200-19990200 Enhancers Aorta Aorta
39 chr17:19989200-19991600 Enhancers Fetal Muscle Leg muscle
40 chr17:19989200-19994200 Weak transcription Osteobl bone
41 chr17:19989400-19990200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr17:19989400-19990200 Enhancers Right Ventricle heart
43 chr17:19989400-19994200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr17:19989600-19990200 Enhancers K562 blood
45 chr17:19989600-19991200 Enhancers Stomach Mucosa stomach
46 chr17:19989600-19994000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr17:19989800-19990400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr17:19989800-19990800 Weak transcription Placenta Amnion Placenta Amnion
49 chr17:19989800-19992400 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr17:19990000-19990200 Enhancers ES-I3 Cell Line embryonic stem cell

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