Variant report

Variant	rs9943913
Chromosome Location	chr13:95208222-95208223
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs7317381	0.83[AFR][1000 genomes]
rs7325129	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34004	chr13:94906537-95392644	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv562756	chr13:95178317-95238154	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv832685	chr13:95179676-95279966	Active TSS Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	nsv832686	chr13:95206742-95400992	Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95202400-95208800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr13:95202600-95221400	Weak transcription	Gastric	stomach
3	chr13:95202800-95210400	Weak transcription	Thymus	Thymus
4	chr13:95202800-95221400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr13:95202800-95222000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr13:95202800-95223600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr13:95203000-95221200	Weak transcription	Duodenum Mucosa	Duodenum
8	chr13:95203000-95221400	Weak transcription	Fetal Intestine Small	intestine
9	chr13:95203000-95222400	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr13:95203200-95220800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr13:95203200-95220800	Weak transcription	Fetal Intestine Large	intestine
12	chr13:95203200-95222200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr13:95203400-95222400	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr13:95203400-95222600	Weak transcription	A549	lung
15	chr13:95204800-95214000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr13:95205000-95208600	Weak transcription	Placenta	Placenta
17	chr13:95205200-95211200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr13:95207600-95210600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr13:95208000-95210200	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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