The 2.0 version of rSNPBase

Variant report

Variant rs9960231
Chromosome Location chr18:43480095-43480096
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43420200-43491800 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr18:43440600-43489600 Weak transcription Small Intestine intestine
3 chr18:43442400-43500200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr18:43445800-43483800 Weak transcription K562 blood
5 chr18:43447000-43491800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr18:43451800-43519600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr18:43455400-43511400 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr18:43456400-43490200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr18:43456400-43498000 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr18:43456400-43500400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr18:43460800-43500200 Strong transcription Osteobl bone
12 chr18:43460800-43500400 Strong transcription Primary T helper cells fromperipheralblood blood
13 chr18:43462200-43492000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr18:43466400-43498400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr18:43469400-43487600 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr18:43469800-43519000 Weak transcription A549 lung
17 chr18:43471000-43506400 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr18:43471200-43480800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr18:43471800-43500200 Strong transcription Adipose Nuclei Adipose
20 chr18:43471800-43531600 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr18:43472000-43536800 Strong transcription Primary monocytes fromperipheralblood blood
22 chr18:43472600-43498600 Strong transcription Primary B cells from peripheral blood blood
23 chr18:43473000-43485800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr18:43473000-43505800 Strong transcription Duodenum Mucosa Duodenum
25 chr18:43473200-43480200 Strong transcription Fetal Stomach stomach
26 chr18:43473600-43481600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr18:43474000-43505200 Strong transcription NHLF lung
28 chr18:43474400-43484200 Strong transcription Sigmoid Colon Sigmoid Colon
29 chr18:43474400-43490800 Strong transcription Fetal Intestine Large intestine
30 chr18:43474400-43500000 Strong transcription Muscle Satellite Cultured Cells --
31 chr18:43474600-43498200 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr18:43474600-43511000 Strong transcription Primary B cells from cord blood blood
33 chr18:43474600-43511200 Strong transcription Fetal Muscle Trunk muscle
34 chr18:43474800-43480600 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr18:43474800-43488000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr18:43474800-43511200 Strong transcription Primary T cells fromperipheralblood blood
37 chr18:43475200-43490800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr18:43475200-43535800 Strong transcription Placenta Placenta
39 chr18:43475400-43481200 Strong transcription Primary T helper naive cells from peripheral blood blood
40 chr18:43475400-43500600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr18:43476200-43482400 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr18:43476200-43498000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
43 chr18:43476400-43497800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr18:43476600-43524000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr18:43476800-43500400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr18:43477000-43482400 Strong transcription Left Ventricle heart
47 chr18:43477000-43485000 Strong transcription HSMM muscle
48 chr18:43477000-43500000 Strong transcription NHDF-Ad bronchial
49 chr18:43477200-43490800 Strong transcription NH-A brain
50 chr18:43477400-43498200 Strong transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015