Variant report

Variant	rs9960312
Chromosome Location	chr18:45281576-45281577
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11872400	1.00[EUR][1000 genomes]
rs28821510	1.00[EUR][1000 genomes]
rs55719785	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73439792	1.00[EUR][1000 genomes]
rs8086302	1.00[EUR][1000 genomes]
rs9946613	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9953119	1.00[EUR][1000 genomes]
rs9962747	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3425854	chr18:45188942-45336590	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:45281000-45282600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr18:45281200-45281600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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