Variant report

Variant rs9960677
Chromosome Location chr18:25690542-25690543
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25655800-25690800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr18:25687200-25699800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr18:25687400-25693000 Enhancers HUES48 Cell Line embryonic stem cell
4 chr18:25687400-25696800 Enhancers Cortex derived primary cultured neurospheres brain
5 chr18:25687600-25693000 Enhancers Liver Liver
6 chr18:25687600-25694200 Enhancers HUES6 Cell Line embryonic stem cell
7 chr18:25687800-25692400 Enhancers Fetal Brain Female brain
8 chr18:25687800-25693000 Enhancers Brain Germinal Matrix brain
9 chr18:25688000-25691200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr18:25688000-25691400 Enhancers iPS-15b Cell Line embryonic stem cell
11 chr18:25688000-25691400 Enhancers Brain Substantia Nigra brain
12 chr18:25688000-25691600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr18:25688000-25692800 Enhancers Brain Hippocampus Middle brain
14 chr18:25688000-25693200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr18:25688200-25693000 Enhancers Brain Anterior Caudate brain
16 chr18:25688200-25694000 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr18:25688400-25690600 Enhancers Osteobl bone
18 chr18:25688400-25691400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr18:25688400-25691400 Weak transcription Fetal Intestine Small intestine
20 chr18:25688400-25691600 Weak transcription Fetal Intestine Large intestine
21 chr18:25688400-25691800 Enhancers Muscle Satellite Cultured Cells --
22 chr18:25688400-25692000 Enhancers HSMM muscle
23 chr18:25688400-25692200 Enhancers NH-A brain
24 chr18:25688400-25693000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr18:25689000-25690800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr18:25689200-25691000 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr18:25689200-25692000 Enhancers A549 lung
28 chr18:25689200-25692000 Weak transcription HepG2 liver
29 chr18:25689400-25691200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr18:25689600-25691000 Enhancers ES-WA7 Cell Line embryonic stem cell
31 chr18:25689800-25691000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr18:25689800-25691000 Enhancers Brain Angular Gyrus brain
33 chr18:25689800-25691400 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr18:25689800-25691400 Enhancers Brain Inferior Temporal Lobe brain
35 chr18:25689800-25691400 Enhancers Fetal Brain Male brain
36 chr18:25689800-25691600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr18:25689800-25693000 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr18:25689800-25693000 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr18:25689800-25695600 Enhancers HUES64 Cell Line embryonic stem cell
40 chr18:25690000-25690600 Enhancers HSMMtube muscle
41 chr18:25690000-25691000 Enhancers H1 Cell Line embryonic stem cell
42 chr18:25690000-25691400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr18:25690000-25691400 Enhancers H9 Cell Line embryonic stem cell
44 chr18:25690000-25691400 Enhancers Brain Cingulate Gyrus brain
45 chr18:25690000-25691600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr18:25690000-25692800 Enhancers iPS-20b Cell Line embryonic stem cell
47 chr18:25690200-25690600 Enhancers Fetal Muscle Leg muscle
48 chr18:25690200-25691000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr18:25690200-25691000 Weak transcription NHLF lung
50 chr18:25690200-25691200 Enhancers Right Atrium heart

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