Variant report

Variant	rs9978086
Chromosome Location	chr21:46963139-46963140
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:15)
CpG islands
(count:0)
Chromatin interactive
region (count:15)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:15 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GABPA	chr21:46962746-46963265	H1-hESC	embryonic stem cell:	n/a	n/a
2	POLR2A	chr21:46962742-46963265	GM12878	blood:	n/a	n/a
3	POLR2A	chr21:46961151-46963449	Raji	blood:	n/a	n/a
4	POLR2A	chr21:46963063-46963450	MCF10A-Er-Src	breast:	n/a	n/a
5	POLR2A	chr21:46963050-46963557	K562	blood:	n/a	n/a
6	ELF1	chr21:46962753-46963944	GM12878	blood:	n/a	n/a
7	MAZ	chr21:46963129-46963428	GM12878	blood:	n/a	n/a
8	MTA3	chr21:46963089-46963591	GM12878	blood:	n/a	n/a
9	MAX	chr21:46963048-46963164	GM12878	blood:	n/a	chr21:46963122-46963131
10	POLR2A	chr21:46961503-46963146	GM18505	blood:	n/a	n/a
11	MAX	chr21:46962110-46963202	H1-hESC	embryonic stem cell:	n/a	chr21:46963122-46963131 chr21:46962435-46962444 chr21:46962422-46962432 chr21:46962728-46962738 chr21:46962820-46962829 chr21:46962254-46962263
12	HMGN3	chr21:46962784-46963154	K562	blood:	n/a	n/a
13	GABPA	chr21:46962700-46963246	H1-hESC	embryonic stem cell:	n/a	n/a
14	POLR2A	chr21:46963118-46963452	GM12878	blood:	n/a	n/a
15	POLR2A	chr21:46962076-46963509	HL-60	blood:	n/a	n/a

No data

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr21:46710943..46713565-chr21:46960523..46963682,3	K562	blood:
2	chr21:46924130..46929087-chr21:46960348..46963435,5	K562	blood:
3	chr21:46707942..46709633-chr21:46962213..46963718,2	MCF-7	breast:
4	chr21:46947000..46951663-chr21:46959484..46964448,11	MCF-7	breast:
5	chr21:46961035..46963239-chr21:47061163..47064234,4	MCF-7	breast:
6	chr21:46824862..46827274-chr21:46960738..46963702,3	MCF-7	breast:
7	chr21:46960927..46963359-chr21:47063243..47066000,2	K562	blood:
8	chr21:46929866..46938044-chr21:46958345..46966843,19	MCF-7	breast:
9	chr21:46706241..46708777-chr21:46961414..46964392,3	MCF-7	breast:
10	chr21:46960903..46963303-chr9:138987019..138988744,2	MCF-7	breast:
11	chr21:46929300..46931483-chr21:46962485..46964142,2	K562	blood:
12	chr21:46932082..46938082-chr21:46958527..46965997,11	MCF-7	breast:
13	chr1:149857665..149860140-chr21:46961776..46964216,2	MCF-7	breast:
14	chr21:46908080..46910421-chr21:46961759..46963775,3	K562	blood:
15	chr21:46823109..46826599-chr21:46959366..46963306,4	MCF-7	breast:

No data

Variant related genes	Relation type
SLC19A1	TF binding region
ENSG00000184260	Chromatin interaction
ENSG00000186866	Chromatin interaction
ENSG00000148411	Chromatin interaction
ENSG00000215447	Chromatin interaction
ENSG00000178096	Chromatin interaction
ENSG00000184270	Chromatin interaction
ENSG00000183570	Chromatin interaction
ENSG00000173638	Chromatin interaction
ENSG00000223768	Chromatin interaction
ENSG00000182871	Chromatin interaction
ENSG00000184678	Chromatin interaction

Extended variants
information (count: 73 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs73372960	1.00[AMR][1000 genomes]
rs73372961	1.00[AMR][1000 genomes]
rs73372963	1.00[AMR][1000 genomes]
rs9978673	1.00[AMR][1000 genomes]
rs9978677	1.00[AMR][1000 genomes]
rs9979087	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:67 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531546	chr21:46504151-47411772	Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
2	nsv1057807	chr21:46656346-47077374	Weak transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
3	esv2762114	chr21:46680202-47067744	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	68 gene(s)	inside rSNPs	diseases
4	nsv914012	chr21:46695039-47015661	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
5	nsv1058665	chr21:46719445-47634282	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	91 gene(s)	inside rSNPs	diseases
6	nsv544486	chr21:46719445-47634282	Bivalent/Poised TSS Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	91 gene(s)	inside rSNPs	diseases
7	nsv914027	chr21:46765580-46982335	Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	44 gene(s)	inside rSNPs	diseases
8	esv1794926	chr21:46781404-46965534	Enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	39 gene(s)	inside rSNPs	diseases
9	nsv914037	chr21:46816363-46982335	Active TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
10	nsv914038	chr21:46817380-46964378	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
11	nsv1058685	chr21:46819364-46967996	Bivalent Enhancer Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
12	nsv914044	chr21:46821907-46982335	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
13	nsv1056917	chr21:46822253-46976682	Enhancers Strong transcription Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
14	nsv914046	chr21:46830873-46982335	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
15	nsv516407	chr21:46830873-47040656	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
16	nsv1066282	chr21:46839570-46966180	Strong transcription Flanking Active TSS Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
17	nsv1057447	chr21:46839570-46976682	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
18	nsv914048	chr21:46839904-47032872	Enhancers Genic enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
19	nsv834111	chr21:46843086-47005244	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	31 gene(s)	inside rSNPs	diseases
20	esv1841607	chr21:46846944-46970385	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
21	nsv1062107	chr21:46847759-46976682	Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
22	esv1822272	chr21:46848326-47038855	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	31 gene(s)	inside rSNPs	diseases
23	nsv914049	chr21:46848589-46982335	Genic enhancers Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
24	nsv1059083	chr21:46855788-46964378	Strong transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
25	nsv914054	chr21:46859717-46964378	Enhancers Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
26	esv1816583	chr21:46859717-46982335	Enhancers ZNF genes & repeats Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
27	nsv1067396	chr21:46882278-46967996	Genic enhancers Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
28	nsv544490	chr21:46882278-46967996	Flanking Active TSS Strong transcription Weak transcription Active TSS Genic enhancers Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
29	nsv1064667	chr21:46882647-46976682	Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
30	nsv1064108	chr21:46882647-46979776	Flanking Active TSS Strong transcription Bivalent/Poised TSS Weak transcription ZNF genes & repeats Genic enhancers Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
31	nsv914059	chr21:46883153-46964378	Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
32	nsv1056757	chr21:46886710-46970498	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
33	nsv1065126	chr21:46886710-46976682	Enhancers Active TSS ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
34	nsv1060416	chr21:46886710-46979776	Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
35	nsv914060	chr21:46889666-47015661	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
36	nsv1056986	chr21:46890759-46976682	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
37	nsv1055493	chr21:46894021-46966180	Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
38	nsv1065095	chr21:46894736-46976682	Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
39	nsv1062243	chr21:46894736-46979776	Active TSS Strong transcription Genic enhancers Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
40	nsv914061	chr21:46897221-46964378	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
41	nsv914062	chr21:46899119-46982335	Strong transcription ZNF genes & repeats Genic enhancers Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
42	nsv1056939	chr21:46903412-46976682	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
43	nsv1066039	chr21:46903412-46979776	Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
44	nsv914063	chr21:46903412-46982335	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
45	nsv1056550	chr21:46905824-46976682	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
46	nsv1063038	chr21:46905824-46979776	Strong transcription Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
47	nsv1059903	chr21:46906690-46976682	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
48	nsv1058905	chr21:46906690-46979776	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
49	nsv914064	chr21:46912386-46964378	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
50	nsv914065	chr21:46912386-46982335	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:46961000-46963400	Active TSS	HUES64 Cell Line	embryonic stem cell
2	chr21:46961000-46963400	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr21:46961200-46963200	Active TSS	H9 Cell Line	embryonic stem cell
4	chr21:46961200-46963600	Active TSS	iPS-15b Cell Line	embryonic stem cell
5	chr21:46961600-46963200	Active TSS	Colon Smooth Muscle	Colon
6	chr21:46961600-46963400	Active TSS	Brain Substantia Nigra	brain
7	chr21:46961600-46963400	Active TSS	Duodenum Smooth Muscle	Duodenum
8	chr21:46961600-46963600	Active TSS	Brain Anterior Caudate	brain
9	chr21:46961800-46963200	Active TSS	HUES6 Cell Line	embryonic stem cell
10	chr21:46961800-46963200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr21:46961800-46963200	Active TSS	Rectal Smooth Muscle	rectum
12	chr21:46961800-46963400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr21:46961800-46963800	Enhancers	Primary T helper naive cells from peripheral blood	blood
14	chr21:46961800-46964000	Enhancers	Spleen	Spleen
15	chr21:46962400-46963200	Flanking Active TSS	Primary B cells from cord blood	blood
16	chr21:46962600-46963200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
17	chr21:46962600-46963200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
18	chr21:46962600-46963200	Flanking Active TSS	Colonic Mucosa	Colon
19	chr21:46962600-46963200	Enhancers	Esophagus	oesophagus
20	chr21:46962600-46963200	Flanking Active TSS	Fetal Muscle Leg	muscle
21	chr21:46962600-46963200	Flanking Active TSS	Dnd41	blood
22	chr21:46962600-46963600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr21:46962600-46963600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
24	chr21:46962600-46963600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
25	chr21:46962600-46963800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr21:46962600-46964200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr21:46962600-46964200	Flanking Active TSS	Placenta	Placenta
28	chr21:46962800-46963200	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
29	chr21:46962800-46963200	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr21:46962800-46963200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr21:46962800-46963200	Flanking Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr21:46962800-46963200	Flanking Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr21:46962800-46963200	Flanking Active TSS	Primary B cells from peripheral blood	blood
34	chr21:46962800-46963200	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
35	chr21:46962800-46963200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
36	chr21:46962800-46963200	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
37	chr21:46962800-46963200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr21:46962800-46963200	Enhancers	Muscle Satellite Cultured Cells	--
39	chr21:46962800-46963200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr21:46962800-46963200	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr21:46962800-46963200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr21:46962800-46963200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr21:46962800-46963200	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
44	chr21:46962800-46963200	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
45	chr21:46962800-46963200	Enhancers	Fetal Brain Male	brain
46	chr21:46962800-46963200	Enhancers	Fetal Heart	heart
47	chr21:46962800-46963200	Enhancers	Sigmoid Colon	Sigmoid Colon
48	chr21:46962800-46963200	Flanking Active TSS	Stomach Smooth Muscle	stomach
49	chr21:46962800-46963200	Flanking Bivalent TSS/Enh	Thymus	Thymus
50	chr21:46962800-46963200	Flanking Active TSS	HMEC	breast

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