Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:152484555..152486992-chr5:152492317..152495243,3	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1123202	1.00[ASN][1000 genomes]
rs1438935	1.00[ASN][1000 genomes]
rs17490495	1.00[ASN][1000 genomes]
rs17490523	1.00[ASN][1000 genomes]
rs17490621	1.00[ASN][1000 genomes]
rs17490669	1.00[ASN][1000 genomes]
rs17491791	1.00[ASN][1000 genomes]
rs17493016	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17493121	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17493476	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17494099	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17576736	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17578068	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17578717	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2349021	1.00[ASN][1000 genomes]
rs4958332	1.00[ASN][1000 genomes]
rs4958603	1.00[ASN][1000 genomes]
rs4958605	1.00[ASN][1000 genomes]
rs4958608	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67942753	0.87[ASN][1000 genomes]
rs6886088	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6887416	1.00[ASN][1000 genomes]
rs72808724	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73284261	1.00[ASN][1000 genomes]
rs73284269	1.00[ASN][1000 genomes]
rs73284276	1.00[ASN][1000 genomes]
rs73284282	1.00[ASN][1000 genomes]
rs73284294	1.00[ASN][1000 genomes]
rs73284298	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023676	chr5:151979253-152925064	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv537927	chr5:151979253-152925064	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv883050	chr5:152277537-152540026	Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv949596	chr5:152343943-152548821	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:152491400-152495000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr5:152492600-152493600	Enhancers	Pancreatic Islets	Pancreatic Islet

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