Variant report

Variant	esv16807
Chromosome Location	chr4:10099819-10234566
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3680)
CpG islands
(count:1893)
Chromatin interactive
region (count:299)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3680 , 50 per page) page: 1 2 3 4 5 6 7 ... 74

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:10206944-10207053	HepG2	liver:	n/a	n/a
2	ARID3A	chr4:10171356-10172376	K562	blood:	n/a	n/a
3	ARID3A	chr4:10119476-10119692	K562	blood:	n/a	n/a
4	ARID3A	chr4:10122672-10123968	HepG2	liver:	n/a	n/a
5	ARID3A	chr4:10125192-10125592	HepG2	liver:	n/a	n/a
6	ARID3A	chr4:10118478-10119106	K562	blood:	n/a	n/a
7	ARID3A	chr4:10188308-10188961	K562	blood:	n/a	n/a
8	ARID3A	chr4:10185222-10185607	K562	blood:	n/a	chr4:10185454-10185470
9	ARID3A	chr4:10118681-10118881	HepG2	liver:	n/a	n/a
10	ARID3A	chr4:10186847-10188023	K562	blood:	n/a	n/a
11	ARID3A	chr4:10174858-10175646	K562	blood:	n/a	n/a
12	ARID3A	chr4:10108260-10108548	K562	blood:	n/a	n/a
13	ARID3A	chr4:10159442-10159716	K562	blood:	n/a	n/a
14	ARID3A	chr4:10202441-10202778	K562	blood:	n/a	n/a
15	ARID3A	chr4:10206912-10207070	K562	blood:	n/a	n/a
16	ARID3A	chr4:10175936-10176225	K562	blood:	n/a	n/a
17	ARID3A	chr4:10172580-10173201	K562	blood:	n/a	n/a
18	ARID3A	chr4:10182036-10184108	K562	blood:	n/a	n/a
19	ATF1	chr4:10172681-10173016	K562	blood:	n/a	n/a
20	ATF1	chr4:10159418-10159720	K562	blood:	n/a	n/a
21	ATF1	chr4:10174911-10175439	K562	blood:	n/a	n/a
22	ATF1	chr4:10188186-10188661	K562	blood:	n/a	n/a
23	ATF1	chr4:10118542-10118883	K562	blood:	n/a	n/a
24	ATF1	chr4:10108289-10108595	K562	blood:	n/a	n/a
25	ATF1	chr4:10184693-10185042	K562	blood:	n/a	n/a
26	ATF1	chr4:10187244-10187892	K562	blood:	n/a	n/a
27	ATF1	chr4:10182216-10183403	K562	blood:	n/a	n/a
28	ATF1	chr4:10171263-10171804	K562	blood:	n/a	n/a
29	ATF1	chr4:10199601-10200004	K562	blood:	n/a	n/a
30	ATF2	chr4:10159321-10159751	H1-hESC	embryonic stem cell:	n/a	n/a
31	ATF2	chr4:10117291-10117950	GM12878	blood:	n/a	n/a
32	ATF2	chr4:10117657-10118032	H1-hESC	embryonic stem cell:	n/a	n/a
33	ATF2	chr4:10118991-10119493	GM12878	blood:	n/a	n/a
34	ATF2	chr4:10112611-10113952	H1-hESC	embryonic stem cell:	n/a	n/a
35	ATF2	chr4:10116355-10116749	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF2	chr4:10114184-10114609	H1-hESC	embryonic stem cell:	n/a	n/a
37	ATF2	chr4:10118626-10118966	GM12878	blood:	n/a	n/a
38	ATF2	chr4:10117273-10117973	H1-hESC	embryonic stem cell:	n/a	n/a
39	ATF2	chr4:10118586-10119550	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF2	chr4:10152775-10153075	GM12878	blood:	n/a	n/a
41	ATF2	chr4:10118639-10119069	H1-hESC	embryonic stem cell:	n/a	n/a
42	ATF2	chr4:10159305-10159743	H1-hESC	embryonic stem cell:	n/a	n/a
43	ATF2	chr4:10118218-10119845	GM12878	blood:	n/a	n/a
44	ATF2	chr4:10116281-10116639	H1-hESC	embryonic stem cell:	n/a	n/a
45	ATF3	chr4:10182376-10183375	K562	blood:	n/a	n/a
46	ATF3	chr4:10174879-10175394	K562	blood:	n/a	n/a
47	ATF3	chr4:10159392-10159666	K562	blood:	n/a	chr4:10159502-10159515
48	ATF3	chr4:10187352-10187768	K562	blood:	n/a	n/a
49	BACH1	chr4:10118714-10120047	K562	blood:	n/a	n/a
50	BACH1	chr4:10113010-10113456	H1-hESC	embryonic stem cell:	n/a	n/a

(count:1893 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:10119810-10119860	ProgFib	skin:	n/a
2	chr4:10119810-10119860	NH-A	brain:	n/a
3	chr4:10119810-10119860	ProgFib	skin:	n/a
4	chr4:10119810-10119860	NH-A	brain:	n/a
5	chr4:10147100-10147150	HAEpiC	amniotic membrane:	n/a
6	chr4:10147302-10147352	HepG2	liver:	n/a
7	chr4:10101400-10101450	HUVEC	blood vessel:	n/a
8	chr4:10145483-10145533	Hela-S3	cervix:	n/a
9	chr4:10147302-10147352	PANC-1	pancreas:	n/a
10	chr4:10117799-10117849	Hela-S3	cervix:	n/a
11	chr4:10147302-10147352	ECC-1	luminal epithelium:	n/a
12	chr4:10118260-10118310	HIPEpiC	eye:	n/a
13	chr4:10116515-10116565	BJ	skin:	n/a
14	chr4:10110163-10110213	HNPCEpiC	eye:	n/a
15	chr4:10117479-10117529	MCF-7	breast:	n/a
16	chr4:10145483-10145533	HCM	heart:	n/a
17	chr4:10119609-10119659	AG10803	skin:	n/a
18	chr4:10118935-10118985	IMR90	lung:	fetal
19	chr4:10125330-10125380	PrEC	prostate:	n/a
20	chr4:10101400-10101450	BJ	skin:	n/a
21	chr4:10101400-10101450	HCM	heart:	n/a
22	chr4:10116515-10116565	HEK293	kidney:	embryo
23	chr4:10147606-10147656	SK-N-MC	brain:	n/a
24	chr4:10112059-10112109	AG09309	skin:	n/a
25	chr4:10122153-10122203	Jurkat	blood:	n/a
26	chr4:10145483-10145533	AG04449	skin:	fetal
27	chr4:10147330-10147380	HRPEpiC	eye:	n/a
28	chr4:10160060-10160110	PFSK-1	brain:	n/a
29	chr4:10147100-10147150	HPAEpiC	pulmonary alveolar:	n/a
30	chr4:10120780-10120830	H1-hESC	embryonic stem cell:	embryo
31	chr4:10118984-10119034	HCPEpiC	choroid plexus:	n/a
32	chr4:10101400-10101450	PANC-1	pancreas:	n/a
33	chr4:10122153-10122203	BE2_C	brain:	n/a
34	chr4:10119697-10119747	GM12878	blood:	n/a
35	chr4:10147606-10147656	PrEC	prostate:	n/a
36	chr4:10149849-10149899	CMK	blood:	n/a
37	chr4:10119697-10119747	PANC-1	pancreas:	n/a
38	chr4:10117799-10117849	HAEpiC	amniotic membrane:	n/a
39	chr4:10113794-10113844	NHBE	bronchial:	n/a
40	chr4:10119810-10119860	HCT-116	colon:	n/a
41	chr4:10119609-10119659	ovcar-3	ovarian:	n/a
42	chr4:10120780-10120830	HCPEpiC	choroid plexus:	n/a
43	chr4:10147606-10147656	AG09309	skin:	n/a
44	chr4:10118935-10118985	ovcar-3	ovarian:	n/a
45	chr4:10119609-10119659	AoSMC	blood vessel:	n/a
46	chr4:10147606-10147656	U87	brain:	n/a
47	chr4:10118265-10118315	HAEpiC	amniotic membrane:	n/a
48	chr4:10118265-10118315	Hela-S3	cervix:	n/a
49	chr4:10113794-10113844	IMR90	lung:	fetal
50	chr4:10120780-10120830	HRE	kidney:	n/a

(count:299 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr4:10142468..10145387-chr4:10146611..10148310,2	MCF-7	breast:
2	chr4:10162053..10164420-chr4:10458395..10460769,2	K562	blood:
3	chr4:10120550..10123104-chr4:10488243..10490755,2	K562	blood:
4	chr4:10119485..10122055-chr4:10473675..10475984,2	K562	blood:
5	chr4:10117020..10119192-chr4:10169153..10171156,2	MCF-7	breast:
6	chr4:10177971..10181867-chr4:10459708..10464611,4	K562	blood:
7	chr4:10100289..10102806-chr4:10104865..10109252,4	MCF-7	breast:
8	chr4:10172802..10175283-chr4:10404131..10407127,2	K562	blood:
9	chr4:10117656..10120785-chr4:10200069..10203011,5	K562	blood:
10	chr4:10159584..10164126-chr4:10173679..10176923,6	K562	blood:
11	chr4:10119416..10121932-chr4:10294541..10296176,2	K562	blood:
12	chr4:10158010..10160333-chr4:10437817..10440737,2	K562	blood:
13	chr4:10141623..10144820-chr4:10145857..10148531,3	K562	blood:
14	chr4:10175247..10177327-chr4:10228151..10230198,2	K562	blood:
15	chr4:10118457..10122021-chr9:33165887..33167387,4	K562	blood:
16	chr4:10114162..10115900-chr4:10186432..10189186,2	K562	blood:
17	chr4:10132922..10135214-chr4:10181103..10182859,2	K562	blood:
18	chr4:10118560..10120526-chr4:10203986..10206288,3	K562	blood:
19	chr1:45187046..45187955-chr4:10118506..10119135,2	HCT-116	colon:
20	chr4:10138009..10140287-chr4:10142395..10145088,2	MCF-7	breast:
21	chr4:10119371..10120949-chr4:10187732..10190413,2	K562	blood:
22	chr4:10120013..10122131-chr4:10436249..10439756,3	K562	blood:
23	chr4:10114078..10122203-chr4:10455501..10461954,12	K562	blood:
24	chr4:10121065..10123200-chr4:10609575..10612227,2	K562	blood:
25	chr4:10041255..10044577-chr4:10118999..10121902,3	K562	blood:
26	chr4:10159186..10164011-chr4:10164137..10169302,8	K562	blood:
27	chr4:10109894..10126876-chr4:10164648..10190106,79	K562	blood:
28	chr17:62971116..62971769-chr4:10117977..10118825,2	HCT-116	colon:
29	chr4:10155458..10156959-chr4:10169942..10172746,2	K562	blood:
30	chr4:10119978..10123045-chr4:10320529..10323793,3	K562	blood:
31	chr4:10182377..10185038-chr4:10453503..10456156,2	K562	blood:
32	chr4:10110208..10112839-chr4:10141638..10144449,2	MCF-7	breast:
33	chr4:10118162..10120785-chr4:10200742..10203933,4	K562	blood:
34	chr4:10124578..10127302-chr4:10186119..10188725,2	K562	blood:
35	chr15:65596761..65597431-chr4:10118051..10119234,3	NB4	blood:
36	chr4:10099001..10100865-chr4:10100880..10102425,2	MCF-7	breast:
37	chr4:10141623..10144820-chr4:10145857..10148531,3	K562	blood:
38	chr4:10218238..10220165-chr4:10231013..10232714,2	K562	blood:
39	chr4:10155458..10156959-chr4:10169942..10172746,2	K562	blood:
40	chr4:10161152..10162147-chr4:10556178..10556908,2	K562	blood:
41	chr4:10156172..10158401-chr4:10178392..10179954,2	K562	blood:
42	chr4:10117300..10124855-chr4:10138380..10145377,13	MCF-7	breast:
43	chr4:10182452..10185153-chr4:10405566..10407454,2	K562	blood:
44	chr4:10121175..10123087-chr4:10143158..10145495,2	MCF-7	breast:
45	chr4:10118696..10122262-chr4:10407294..10411909,5	K562	blood:
46	chr4:10122589..10124935-chr4:10442923..10445169,2	K562	blood:
47	chr4:10019909..10022554-chr4:10120525..10123585,3	K562	blood:
48	chr4:10118945..10120597-chr4:10522587..10525551,2	K562	blood:
49	chr12:46766102..46766947-chr4:10118442..10119033,2	NB4	blood:
50	chr17:47269694..47270307-chr4:10118653..10119466,2	Hela-S3	cervix:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WDR1-7	chr4:10201447-10202296	NONHSAT095488
2	lnc-WDR1-2	chr4:10144991-10145279	NONHSAT095429
3	lnc-WDR1-4	chr4:10151989-10152058	NONHSAT095472
4	lnc-WDR1-4	chr4:10159007-10159491	NONHSAT095472
5	lnc-WDR1-6	chr4:10168783-10169389	NONHSAT095487

No data

Variant related genes	Relation type
RNA5SP155	TF binding region
ENSG00000248777	TF binding region
ENSG00000251296	TF binding region
WDR1	TF binding region
ENSG00000250393	TF binding region
RNA5SP155	CpG island
ENSG00000248777	CpG island
ENSG00000251296	CpG island
WDR1	CpG island
ENSG00000250393	CpG island
ENSG00000233554	chromatin interactions
ENSG00000162616	chromatin interactions
ENSG00000250040	chromatin interactions
ENSG00000178636	chromatin interactions
ENSG00000223086	chromatin interactions
ENSG00000071127	chromatin interactions
ENSG00000199377	chromatin interactions
ENSG00000264931	chromatin interactions
ENSG00000273338	chromatin interactions
ENSG00000137203	chromatin interactions
ENSG00000169814	chromatin interactions
ENSG00000248777	chromatin interactions
ENSG00000250074	chromatin interactions
ENSG00000145390	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000251296	chromatin interactions
ENSG00000086062	chromatin interactions
ENSG00000198374	chromatin interactions
ENSG00000137449	chromatin interactions
ENSG00000135070	chromatin interactions
ENSG00000178163	chromatin interactions
ENSG00000250393	chromatin interactions
ENSG00000271544	chromatin interactions
ENSG00000116539	chromatin interactions
ENSG00000163527	chromatin interactions
ENSG00000229117	chromatin interactions
ENSG00000200156	chromatin interactions
ENSG00000144029	chromatin interactions
ENSG00000196355	chromatin interactions
ENSG00000131373	chromatin interactions
ENSG00000109787	chromatin interactions
ENSG00000156983	chromatin interactions
ENSG00000256316	chromatin interactions
ENSG00000250613	chromatin interactions
ENSG00000116161	chromatin interactions
ENSG00000231160	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000150459	chromatin interactions
ENSG00000214174	chromatin interactions
ENSG00000201801	chromatin interactions
ENSG00000247624	chromatin interactions
ENSG00000109667	chromatin interactions

Extended variants
information (count: 9466 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:9466 , 50 per page) page: 1 2 3 4 5 6 7 ... 190

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2241483	chr4:10099831-10099832	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs541528086	chr4:10099840-10099841	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs560705307	chr4:10099847-10099848	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs547552399	chr4:10099853-10099854	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs191646900	chr4:10099872-10099873	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs182358670	chr4:10099900-10099901	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs544686524	chr4:10099970-10099971	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs545701156	chr4:10099972-10099973	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs148303198	chr4:10099976-10099977	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs187442101	chr4:10099998-10099999	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs546799779	chr4:10100002-10100003	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs561715774	chr4:10100081-10100082	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs193263248	chr4:10100143-10100144	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs548365107	chr4:10100191-10100192	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs570065954	chr4:10100213-10100214	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs537399207	chr4:10100221-10100222	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs552593863	chr4:10100222-10100223	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs571206166	chr4:10100289-10100290	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs535321736	chr4:10100294-10100295	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs55941493	chr4:10100341-10100342	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs185429704	chr4:10100351-10100352	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs141453649	chr4:10100369-10100370	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs554827439	chr4:10100384-10100385	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs150853663	chr4:10100414-10100415	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs536957963	chr4:10100448-10100449	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs574985779	chr4:10100481-10100482	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs370951557	chr4:10100482-10100483	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs545440504	chr4:10100517-10100518	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs77386977	chr4:10100531-10100532	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs140772303	chr4:10100553-10100554	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs563717810	chr4:10100566-10100567	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs140020969	chr4:10100604-10100605	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs369831277	chr4:10100607-10100608	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs540120830	chr4:10100639-10100640	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs372849742	chr4:10100696-10100697	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs374891992	chr4:10100729-10100730	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs369246197	chr4:10100730-10100731	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs372860205	chr4:10100745-10100746	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs561941042	chr4:10100777-10100778	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs372352948	chr4:10100781-10100782	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs548669717	chr4:10100782-10100783	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs2241484	chr4:10100801-10100802	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs531021814	chr4:10100802-10100803	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs2241485	chr4:10100812-10100813	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs190336686	chr4:10100827-10100828	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs373312928	chr4:10100855-10100856	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs192278307	chr4:10100862-10100863	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs541053951	chr4:10100912-10100913	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs184481934	chr4:10100928-10100929	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs78703898	chr4:10100971-10100972	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21509527	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Schizophrenia	22241247	CNVD
Autosomal-dominant microtia	18179897	CNVD
Glioma	17123091	CNVD
Colorectal cancer	20459617	CNVD
Breast cancer	17133270	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:2526 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:10067600-10102200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr4:10073800-10103800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr4:10073800-10103800	Strong transcription	HUES64 Cell Line	embryonic stem cell
4	chr4:10074000-10103800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr4:10074000-10105600	Strong transcription	H9 Cell Line	embryonic stem cell
6	chr4:10074200-10101200	Strong transcription	Fetal Brain Female	brain
7	chr4:10074200-10106600	Strong transcription	Dnd41	blood
8	chr4:10081600-10103600	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr4:10084400-10114000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr4:10084600-10103000	Strong transcription	Brain Germinal Matrix	brain
11	chr4:10084800-10116600	Genic enhancers	Fetal Muscle Leg	muscle
12	chr4:10085800-10103400	Enhancers	Fetal Heart	heart
13	chr4:10089600-10107800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr4:10090200-10105600	Genic enhancers	Right Ventricle	heart
15	chr4:10090400-10105000	Genic enhancers	Colonic Mucosa	Colon
16	chr4:10090400-10106800	Genic enhancers	Fetal Muscle Trunk	muscle
17	chr4:10090400-10116400	Genic enhancers	Primary T cells fromperipheralblood	blood
18	chr4:10091200-10100600	Genic enhancers	Primary T killer naive cells fromperipheralblood	blood
19	chr4:10091200-10105800	Genic enhancers	Primary T helper cells fromperipheralblood	blood
20	chr4:10091800-10116800	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
21	chr4:10092200-10106400	Genic enhancers	Primary T regulatory cells fromperipheralblood	blood
22	chr4:10092400-10100600	Genic enhancers	Primary T helper naive cells fromperipheralblood	blood
23	chr4:10092400-10107400	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr4:10093000-10116800	Genic enhancers	Fetal Thymus	thymus
25	chr4:10093400-10103800	Genic enhancers	HUVEC	blood vessel
26	chr4:10093600-10100000	Genic enhancers	Duodenum Smooth Muscle	Duodenum
27	chr4:10093600-10100400	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr4:10093600-10101800	Genic enhancers	Brain Hippocampus Middle	brain
29	chr4:10093600-10102000	Genic enhancers	Brain Dorsolateral Prefrontal Cortex	brain
30	chr4:10093600-10104600	Genic enhancers	Brain Inferior Temporal Lobe	brain
31	chr4:10093800-10100600	Genic enhancers	Brain Cingulate Gyrus	brain
32	chr4:10093800-10101400	Genic enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr4:10093800-10102600	Genic enhancers	Brain Substantia Nigra	brain
34	chr4:10093800-10103800	Genic enhancers	Rectal Smooth Muscle	rectum
35	chr4:10093800-10110800	Genic enhancers	Primary T cells from cord blood	blood
36	chr4:10093800-10116000	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr4:10094000-10100600	Genic enhancers	Stomach Mucosa	stomach
38	chr4:10094000-10101200	Genic enhancers	Brain Angular Gyrus	brain
39	chr4:10094000-10104800	Genic enhancers	NHLF	lung
40	chr4:10094200-10108000	Genic enhancers	HMEC	breast
41	chr4:10094400-10104600	Genic enhancers	Primary monocytes fromperipheralblood	blood
42	chr4:10094400-10105000	Genic enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr4:10094600-10102400	Genic enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr4:10094600-10104400	Genic enhancers	GM12878-XiMat	blood
45	chr4:10094600-10105000	Genic enhancers	Esophagus	oesophagus
46	chr4:10094600-10105200	Genic enhancers	NHDF-Ad	bronchial
47	chr4:10095000-10102200	Strong transcription	Cortex derived primary cultured neurospheres	brain
48	chr4:10095000-10104000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
49	chr4:10095200-10106800	Strong transcription	HepG2	liver
50	chr4:10095400-10102800	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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