Variant report

Variant rs546799779
Chromosome Location chr4:10100002-10100003
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:10067600-10102200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr4:10073800-10103800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr4:10073800-10103800 Strong transcription HUES64 Cell Line embryonic stem cell
4 chr4:10074000-10103800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr4:10074000-10105600 Strong transcription H9 Cell Line embryonic stem cell
6 chr4:10074200-10101200 Strong transcription Fetal Brain Female brain
7 chr4:10074200-10106600 Strong transcription Dnd41 blood
8 chr4:10081600-10103600 Genic enhancers Breast Myoepithelial Primary Cells Breast
9 chr4:10084400-10114000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr4:10084600-10103000 Strong transcription Brain Germinal Matrix brain
11 chr4:10084800-10116600 Genic enhancers Fetal Muscle Leg muscle
12 chr4:10085800-10103400 Enhancers Fetal Heart heart
13 chr4:10089600-10107800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr4:10090200-10105600 Genic enhancers Right Ventricle heart
15 chr4:10090400-10105000 Genic enhancers Colonic Mucosa Colon
16 chr4:10090400-10106800 Genic enhancers Fetal Muscle Trunk muscle
17 chr4:10090400-10116400 Genic enhancers Primary T cells fromperipheralblood blood
18 chr4:10091200-10100600 Genic enhancers Primary T killer naive cells fromperipheralblood blood
19 chr4:10091200-10105800 Genic enhancers Primary T helper cells fromperipheralblood blood
20 chr4:10091800-10116800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
21 chr4:10092200-10106400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
22 chr4:10092400-10100600 Genic enhancers Primary T helper naive cells fromperipheralblood blood
23 chr4:10092400-10107400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr4:10093000-10116800 Genic enhancers Fetal Thymus thymus
25 chr4:10093400-10103800 Genic enhancers HUVEC blood vessel
26 chr4:10093600-10100400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr4:10093600-10101800 Genic enhancers Brain Hippocampus Middle brain
28 chr4:10093600-10102000 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr4:10093600-10104600 Genic enhancers Brain Inferior Temporal Lobe brain
30 chr4:10093800-10100600 Genic enhancers Brain Cingulate Gyrus brain
31 chr4:10093800-10101400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr4:10093800-10102600 Genic enhancers Brain Substantia Nigra brain
33 chr4:10093800-10103800 Genic enhancers Rectal Smooth Muscle rectum
34 chr4:10093800-10110800 Genic enhancers Primary T cells from cord blood blood
35 chr4:10093800-10116000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr4:10094000-10100600 Genic enhancers Stomach Mucosa stomach
37 chr4:10094000-10101200 Genic enhancers Brain Angular Gyrus brain
38 chr4:10094000-10104800 Genic enhancers NHLF lung
39 chr4:10094200-10108000 Genic enhancers HMEC breast
40 chr4:10094400-10104600 Genic enhancers Primary monocytes fromperipheralblood blood
41 chr4:10094400-10105000 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr4:10094600-10102400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr4:10094600-10104400 Genic enhancers GM12878-XiMat blood
44 chr4:10094600-10105000 Genic enhancers Esophagus oesophagus
45 chr4:10094600-10105200 Genic enhancers NHDF-Ad bronchial
46 chr4:10095000-10102200 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr4:10095000-10104000 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr4:10095200-10106800 Strong transcription HepG2 liver
49 chr4:10095400-10102800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr4:10095400-10103000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

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