Variant report

Variant	esv1792736
Chromosome Location	chr9:101891126-101909372
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:411)
CpG islands
(count:0)
Chromatin interactive
region (count:46)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:411 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:101899642-101899822	K562	blood:	n/a	n/a
2	ATF1	chr9:101899576-101899857	K562	blood:	n/a	n/a
3	ATF2	chr9:101892179-101892803	GM12878	blood:	n/a	n/a
4	ATF2	chr9:101895449-101895865	GM12878	blood:	n/a	n/a
5	ATF2	chr9:101892162-101892837	GM12878	blood:	n/a	n/a
6	ATF2	chr9:101895376-101895807	GM12878	blood:	n/a	n/a
7	BATF	chr9:101892213-101892759	GM12878	blood:	n/a	n/a
8	BATF	chr9:101892296-101892646	GM12878	blood:	n/a	n/a
9	BCL11A	chr9:101892302-101892731	GM12878	blood:	n/a	chr9:101892552-101892561
10	BCL11A	chr9:101892204-101892746	GM12878	blood:	n/a	chr9:101892552-101892561
11	BCL3	chr9:101892251-101892729	GM12878	blood:	n/a	chr9:101892552-101892561
12	BCL3	chr9:101892219-101892758	GM12878	blood:	n/a	chr9:101892552-101892561
13	BCLAF1	chr9:101892202-101892816	GM12878	blood:	n/a	chr9:101892552-101892561
14	BCLAF1	chr9:101892210-101892821	GM12878	blood:	n/a	chr9:101892552-101892561
15	BHLHE40	chr9:101902781-101902815	GM12878	blood:	n/a	n/a
16	BHLHE40	chr9:101892279-101892733	GM12878	blood:	n/a	n/a
17	CEBPB	chr9:101902171-101902500	K562	blood:	n/a	chr9:101902324-101902337
18	CEBPB	chr9:101892155-101892991	GM12878	blood:	n/a	chr9:101892788-101892799
19	CEBPB	chr9:101902182-101902509	IMR90	lung:	n/a	chr9:101902324-101902337
20	CEBPB	chr9:101902207-101902467	A549	lung:	n/a	chr9:101902324-101902337
21	CEBPB	chr9:101899653-101899910	K562	blood:	n/a	n/a
22	CEBPB	chr9:101902192-101902410	H1-hESC	embryonic stem cell:	n/a	chr9:101902324-101902337
23	CEBPB	chr9:101899638-101899854	K562	blood:	n/a	n/a
24	CHD1	chr9:101891118-101891318	GM12878	blood:	n/a	n/a
25	CHD2	chr9:101892315-101892743	GM12878	blood:	n/a	n/a
26	CHD2	chr9:101903040-101903268	H1-hESC	embryonic stem cell:	n/a	n/a
27	CREB1	chr9:101895387-101895750	GM12878	blood:	n/a	n/a
28	CREB1	chr9:101895214-101895988	GM12878	blood:	n/a	n/a
29	CREB1	chr9:101892124-101892867	GM12878	blood:	n/a	n/a
30	CTCF	chr9:101903100-101903250	GM12868	blood:	n/a	n/a
31	CTCF	chr9:101903083-101903275	GM20000	blood:	n/a	n/a
32	CTCF	chr9:101903062-101903296	HepG2	liver:	n/a	n/a
33	CTCF	chr9:101903071-101903322	GM13977	blood:	n/a	n/a
34	CTCF	chr9:101902891-101903469	MCF-7	breast:	n/a	n/a
35	CTCF	chr9:101903100-101903250	HRPEpiC	eye:	n/a	n/a
36	CTCF	chr9:101903060-101903210	A549	lung:	n/a	n/a
37	CTCF	chr9:101903041-101903344	MCF-7	breast:	n/a	n/a
38	CTCF	chr9:101903018-101903270	A549	lung:	n/a	n/a
39	CTCF	chr9:101897480-101897630	AG04449	skin:	n/a	n/a
40	CTCF	chr9:101903080-101903230	WI-38	lung:	n/a	n/a
41	CTCF	chr9:101903120-101903270	HBMEC	blood vessel:	n/a	n/a
42	CTCF	chr9:101903032-101903344	Gliobla	brain:	n/a	n/a
43	CTCF	chr9:101903140-101903290	HMEC	breast:	n/a	n/a
44	CTCF	chr9:101903080-101903230	SAEC	small airway:	n/a	n/a
45	CTCF	chr9:101902962-101903366	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr9:101903120-101903270	AG09309	skin:	n/a	n/a
47	CTCF	chr9:101903120-101903270	HL-60	blood:	n/a	n/a
48	CTCF	chr9:101903120-101903270	HEEpiC	esophagus:	n/a	n/a
49	CTCF	chr9:101903120-101903270	GM12865	blood:	n/a	n/a
50	CTCF	chr9:101903100-101903250	RPTEC	kidney:	n/a	n/a

No data

(count:46 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:101864389..101869659-chr9:101898096..101900514,5	MCF-7	breast:
2	chr9:101760854..101761829-chr9:101902660..101903198,2	MCF-7	breast:
3	chr9:101610517..101611394-chr9:101902660..101903289,2	MCF-7	breast:
4	chr9:101899920..101901969-chr9:101905038..101907406,2	K562	blood:
5	chr9:101898800..101901227-chr9:101901633..101903156,2	K562	blood:
6	chr9:101866534..101869508-chr9:101907295..101910821,3	MCF-7	breast:
7	chr9:101737038..101737838-chr9:101902687..101903642,3	K562	blood:
8	chr9:101762428..101763408-chr9:101902234..101903630,9	MCF-7	breast:
9	chr9:101762444..101763486-chr9:101902217..101903969,25	MCF-7	breast:
10	chr9:101894017..101896453-chr9:101898927..101901266,2	K562	blood:
11	chr9:101762734..101763562-chr9:101904143..101904831,2	MCF-7	breast:
12	chr9:101892307..101894451-chr9:101895329..101898067,2	K562	blood:
13	chr9:101610575..101611904-chr9:101902666..101903641,7	K562	blood:
14	chr9:101819637..101822232-chr9:101894406..101896072,2	K562	blood:
15	chr9:101898521..101900717-chr9:101901631..101904454,3	K562	blood:
16	chr9:87332836..87333364-chr9:101898075..101898575,2	MCF-7	breast:
17	chr9:101895206..101897891-chr9:101899277..101901035,2	MCF-7	breast:
18	chr9:101764789..101766455-chr9:101899453..101902305,3	K562	blood:
19	chr9:101898800..101901227-chr9:101901633..101903156,2	K562	blood:
20	chr9:101864987..101867823-chr9:101901500..101903919,2	K562	blood:
21	chr9:101610078..101611460-chr9:101902663..101903721,8	MCF-7	breast:
22	chr9:101762134..101763385-chr9:101902694..101903814,11	K562	blood:
23	chr9:101762316..101762978-chr9:101904959..101905498,2	MCF-7	breast:
24	chr9:101865858..101869567-chr9:101901452..101906002,4	MCF-7	breast:
25	chr9:101882797..101885085-chr9:101894383..101896843,2	MCF-7	breast:
26	chr9:101737022..101737815-chr9:101903057..101903607,3	MCF-7	breast:
27	chr9:101869195..101872022-chr9:101900402..101902081,2	K562	blood:
28	chr9:101875664..101877877-chr9:101897071..101898718,2	MCF-7	breast:
29	chr9:101622854..101623401-chr9:101902748..101903437,2	K562	blood:
30	chr9:101875608..101878128-chr9:101899514..101901966,2	K562	blood:
31	chr9:101906079..101907855-chr9:101915148..101917814,2	K562	blood:
32	chr9:101898521..101900717-chr9:101901631..101904454,3	K562	blood:
33	chr9:101751301..101751815-chr9:101902700..101903663,2	MCF-7	breast:
34	chr9:101895206..101897891-chr9:101899277..101901035,2	MCF-7	breast:
35	chr9:101750729..101753162-chr9:101895041..101897883,2	MCF-7	breast:
36	chr9:101892307..101894451-chr9:101895329..101898067,2	K562	blood:
37	chr9:101877300..101879132-chr9:101895213..101897266,2	K562	blood:
38	chr9:101866386..101868901-chr9:101901317..101903071,2	MCF-7	breast:
39	chr9:101608345..101611118-chr9:101900740..101903316,2	MCF-7	breast:
40	chr9:101901991..101903988-chr9:101906296..101908227,2	MCF-7	breast:
41	chr9:101894017..101896453-chr9:101898927..101901266,2	K562	blood:
42	chr9:101865542..101868917-chr9:101887238..101894962,8	MCF-7	breast:
43	chr9:101899920..101901969-chr9:101905038..101907406,2	K562	blood:
44	chr9:101865388..101869128-chr9:101895199..101898267,5	MCF-7	breast:
45	chr9:101747587..101749233-chr9:101899420..101901955,2	K562	blood:
46	chr9:101901991..101903988-chr9:101906296..101908227,2	MCF-7	breast:

No data

Variant related genes	Relation type
RNA5SP290	TF binding region
ENSG00000106799	chromatin interactions
ENSG00000119514	chromatin interactions
ENSG00000267026	chromatin interactions

Extended variants
information (count: 746 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:746 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs201267786	chr9:101891159-101891160	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs543397817	chr9:101891160-101891161	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs387906696	chr9:101891173-101891174	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs369226180	chr9:101891174-101891175	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs199534451	chr9:101891207-101891208	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs200779997	chr9:101891226-101891227	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs112051451	chr9:101891231-101891232	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs145033378	chr9:101891246-101891247	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs111513627	chr9:101891253-101891254	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs201910738	chr9:101891261-101891262	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs200543076	chr9:101891264-101891265	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs200091200	chr9:101891288-101891289	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs147107882	chr9:101891309-101891310	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs550395617	chr9:101891336-101891337	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs200860457	chr9:101891344-101891345	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs201771506	chr9:101891354-101891355	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs149417020	chr9:101891357-101891358	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs199904970	chr9:101891373-101891374	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs371415976	chr9:101891381-101891382	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs144775920	chr9:101891383-101891384	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs374717754	chr9:101891385-101891386	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs200966335	chr9:101891392-101891393	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs202224461	chr9:101891398-101891399	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs200412563	chr9:101891407-101891408	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs577681322	chr9:101891410-101891411	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs199755447	chr9:101891415-101891416	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs202152289	chr9:101891417-101891418	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs192247094	chr9:101891428-101891429	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs56402414	chr9:101891447-101891448	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs34979306	chr9:101891454-101891455	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs182708187	chr9:101891489-101891490	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs147888375	chr9:101891490-101891491	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs369309273	chr9:101891533-101891534	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs141531668	chr9:101891614-101891615	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs567528493	chr9:101891630-101891631	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs536191880	chr9:101891653-101891654	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs11568759	chr9:101891659-101891660	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs575790908	chr9:101891681-101891682	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs11568760	chr9:101891735-101891736	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs538447190	chr9:101891759-101891760	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs558978905	chr9:101891829-101891830	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs72739277	chr9:101891837-101891838	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs187778043	chr9:101891842-101891843	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs149753313	chr9:101891875-101891876	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs192750275	chr9:101891895-101891896	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs139653246	chr9:101891904-101891905	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs527619643	chr9:101891908-101891909	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs563978151	chr9:101891953-101891954	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs532725002	chr9:101891963-101891964	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs183134029	chr9:101891988-101891989	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Nicotine dependence	17160897	CNVD
Mantle cell lymphoma	19029149	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Fukuyama congenital muscular dystrophy	21572526	CNVD
Testicular germ cell tumor	18059402	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:847 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101868400-101896400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr9:101868600-101894400	Weak transcription	Fetal Muscle Trunk	muscle
3	chr9:101870000-101908600	Weak transcription	Brain Germinal Matrix	brain
4	chr9:101875600-101894600	Weak transcription	Spleen	Spleen
5	chr9:101876600-101904200	Weak transcription	Liver	Liver
6	chr9:101878000-101897400	Weak transcription	Brain Cingulate Gyrus	brain
7	chr9:101878800-101891800	Weak transcription	Fetal Stomach	stomach
8	chr9:101878800-101892400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr9:101878800-101903200	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr9:101882000-101892600	Enhancers	Primary T helper naive cells from peripheral blood	blood
11	chr9:101882000-101893400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
12	chr9:101882000-101893400	Enhancers	Primary T helper cells fromperipheralblood	blood
13	chr9:101882000-101895000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
14	chr9:101882200-101901400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
15	chr9:101882200-101903000	Weak transcription	Fetal Muscle Leg	muscle
16	chr9:101882400-101893200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
17	chr9:101882400-101894600	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr9:101883000-101900000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr9:101884400-101891200	Weak transcription	Primary B cells from peripheral blood	blood
20	chr9:101884400-101892800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr9:101884600-101897200	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr9:101884800-101894400	Weak transcription	Aorta	Aorta
23	chr9:101885200-101891400	Weak transcription	Primary hematopoietic stem cells	blood
24	chr9:101885200-101896800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr9:101885200-101901600	Weak transcription	A549	lung
26	chr9:101885600-101891200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr9:101886200-101891400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr9:101886400-101892400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr9:101887200-101893600	Enhancers	Primary T helper cells PMA-I stimulated	--
30	chr9:101887400-101891600	Enhancers	Fetal Brain Female	brain
31	chr9:101887600-101891200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr9:101887600-101892400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr9:101887800-101891600	Genic enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr9:101887800-101892800	Enhancers	HMEC	breast
35	chr9:101888000-101893800	Enhancers	Primary T killer memory cells from peripheral blood	blood
36	chr9:101888200-101891200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr9:101888200-101907000	Weak transcription	HepG2	liver
38	chr9:101888400-101896600	Weak transcription	Stomach Smooth Muscle	stomach
39	chr9:101889000-101891800	Enhancers	Primary T cells from cord blood	blood
40	chr9:101889200-101892800	Enhancers	Breast Myoepithelial Primary Cells	Breast
41	chr9:101889400-101891400	Enhancers	Psoas Muscle	Psoas
42	chr9:101889400-101892800	Genic enhancers	K562	blood
43	chr9:101889400-101904000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
44	chr9:101889600-101892400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
45	chr9:101889600-101901000	Weak transcription	HUES6 Cell Line	embryonic stem cell
46	chr9:101889800-101892400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
47	chr9:101889800-101892800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
48	chr9:101889800-101904400	Weak transcription	Lung	lung
49	chr9:101890000-101891200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr9:101890000-101892000	Enhancers	Colon Smooth Muscle	Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links