No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs7701170 |
chr5:127408921-127408922 |
ZNF genes & repeats Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs558075516 |
chr5:127409022-127409023 |
ZNF genes & repeats Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs369175606 |
chr5:127409045-127409046 |
ZNF genes & repeats Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs576837985 |
chr5:127409144-127409145 |
ZNF genes & repeats Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs7705595 |
chr5:127409159-127409160 |
ZNF genes & repeats Strong transcription Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
6 |
rs7705334 |
chr5:127409191-127409192 |
ZNF genes & repeats Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs556102056 |
chr5:127409242-127409243 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs77272829 |
chr5:127409337-127409338 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs111316185 |
chr5:127409444-127409445 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs575879214 |
chr5:127409494-127409495 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs182858590 |
chr5:127409510-127409511 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs145139517 |
chr5:127409588-127409589 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs527587770 |
chr5:127409819-127409820 |
Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs541188151 |
chr5:127409998-127409999 |
Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs373979132 |
chr5:127410057-127410058 |
Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs572931407 |
chr5:127410103-127410104 |
Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs535222747 |
chr5:127410104-127410105 |
Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs188497405 |
chr5:127410234-127410235 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs72792292 |
chr5:127410235-127410236 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs376420714 |
chr5:127410237-127410238 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs368766654 |
chr5:127410242-127410243 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs563687570 |
chr5:127410423-127410424 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs11749028 |
chr5:127410465-127410466 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs192909227 |
chr5:127410478-127410479 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs11949446 |
chr5:127410505-127410506 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs534998761 |
chr5:127410525-127410526 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs377631275 |
chr5:127410534-127410535 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs551922334 |
chr5:127410690-127410691 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs369895385 |
chr5:127410705-127410706 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs548294786 |
chr5:127410733-127410734 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs76208917 |
chr5:127410745-127410746 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs556025184 |
chr5:127410993-127410994 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs576105241 |
chr5:127411020-127411021 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs535393986 |
chr5:127411028-127411029 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs564621354 |
chr5:127411072-127411073 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs564258152 |
chr5:127411146-127411147 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs572336521 |
chr5:127411309-127411310 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs572072415 |
chr5:127411310-127411311 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs146343757 |
chr5:127411335-127411336 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs564285756 |
chr5:127411360-127411361 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs183153969 |
chr5:127411404-127411405 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs188039005 |
chr5:127411410-127411411 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs10045307 |
chr5:127411454-127411455 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
44 |
rs529353787 |
chr5:127411486-127411487 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs548929883 |
chr5:127411487-127411488 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs373436785 |
chr5:127411537-127411538 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs6595800 |
chr5:127411647-127411648 |
Weak transcription Strong transcription Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
48 |
rs528737608 |
chr5:127411696-127411697 |
Weak transcription Strong transcription Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs191358162 |
chr5:127411698-127411699 |
Weak transcription Strong transcription Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs551822021 |
chr5:127411732-127411733 |
Weak transcription Strong transcription Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|