Variant report

Variant	esv1836939
Chromosome Location	chr4:55701134-55716601
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:194)
CpG islands
(count:61)
Chromatin interactive
region (count:18)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:194 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr4:55707261-55707270	GM12878	blood:	n/a	n/a
2	CTCF	chr4:55707284-55707432	GM12892	blood:	n/a	chr4:55707336-55707357
3	CTCF	chr4:55707320-55707470	HCPEpiC	choroid plexus:	n/a	chr4:55707336-55707357
4	CTCF	chr4:55707322-55707383	Lung_OC	lung:	n/a	chr4:55707336-55707357
5	CTCF	chr4:55707280-55707430	NHDF-neo	bronchial:	n/a	chr4:55707336-55707357
6	CTCF	chr4:55706720-55706870	HMF	breast:	n/a	chr4:55706810-55706828
7	CTCF	chr4:55707194-55707502	IMR90	lung:	n/a	chr4:55707336-55707357
8	CTCF	chr4:55707360-55707510	HCT-116	colon:	n/a	n/a
9	CTCF	chr4:55707220-55707370	HRPEpiC	eye:	n/a	chr4:55707336-55707357
10	CTCF	chr4:55706620-55706770	HPF	lung:	n/a	n/a
11	CTCF	chr4:55707224-55707484	MCF-7	breast:	n/a	chr4:55707336-55707357
12	CTCF	chr4:55707223-55707506	H1-hESC	embryonic stem cell:	n/a	chr4:55707336-55707357
13	CTCF	chr4:55706800-55706950	GM12872	blood:	n/a	chr4:55706810-55706828
14	CTCF	chr4:55707300-55707450	RPTEC	kidney:	n/a	chr4:55707336-55707357
15	CTCF	chr4:55707140-55707290	HAc	cerebellar:	n/a	n/a
16	CTCF	chr4:55707280-55707430	MCF-7	breast:	n/a	chr4:55707336-55707357
17	CTCF	chr4:55706900-55707050	RPTEC	kidney:	n/a	n/a
18	CTCF	chr4:55707260-55707410	WERI-Rb-1	eye:	n/a	chr4:55707336-55707357
19	CTCF	chr4:55707280-55707430	AG04449	skin:	n/a	chr4:55707336-55707357
20	CTCF	chr4:55707230-55707425	T-47D	breast:	n/a	chr4:55707336-55707357
21	CTCF	chr4:55707264-55707441	GM12878	blood:	n/a	chr4:55707336-55707357
22	CTCF	chr4:55707289-55707394	HepG2	liver:	n/a	chr4:55707336-55707357
23	CTCF	chr4:55707240-55707390	BJ	skin:	n/a	chr4:55707336-55707357
24	CTCF	chr4:55707280-55707430	HMEC	breast:	n/a	chr4:55707336-55707357
25	CTCF	chr4:55707260-55707410	GM12869	blood:	n/a	chr4:55707336-55707357
26	CTCF	chr4:55707320-55707470	GM12871	blood:	n/a	chr4:55707336-55707357
27	CTCF	chr4:55707283-55707461	K562	blood:	n/a	chr4:55707336-55707357
28	CTCF	chr4:55707274-55707460	MCF-7	breast:	n/a	chr4:55707336-55707357
29	CTCF	chr4:55706840-55706990	NHDF-neo	bronchial:	n/a	n/a
30	CTCF	chr4:55707240-55707390	HA-sp	spinal cord:	n/a	chr4:55707336-55707357
31	CTCF	chr4:55707300-55707450	GM12873	blood:	n/a	chr4:55707336-55707357
32	CTCF	chr4:55707260-55707410	HBMEC	blood vessel:	n/a	chr4:55707336-55707357
33	CTCF	chr4:55706740-55706890	RPTEC	kidney:	n/a	chr4:55706810-55706828
34	CTCF	chr4:55707320-55707470	HRPEpiC	eye:	n/a	chr4:55707336-55707357
35	CTCF	chr4:55707300-55707450	AG04449	skin:	n/a	chr4:55707336-55707357
36	CTCF	chr4:55707312-55707407	SK-N-SH_RA	brain:	n/a	chr4:55707336-55707357
37	CTCF	chr4:55707260-55707410	GM12872	blood:	n/a	chr4:55707336-55707357
38	CTCF	chr4:55707263-55707472	MCF-7	breast:	n/a	chr4:55707336-55707357
39	CTCF	chr4:55707240-55707390	HPAF	blood vessel:	n/a	chr4:55707336-55707357
40	CTCF	chr4:55707331-55707378	GM10266	blood:	n/a	chr4:55707336-55707357
41	CTCF	chr4:55707280-55707430	HPF	lung:	n/a	chr4:55707336-55707357
42	CTCF	chr4:55706640-55706790	HMEC	breast:	n/a	n/a
43	CTCF	chr4:55707180-55707330	HVMF	connective:	n/a	n/a
44	CTCF	chr4:55707300-55707450	HAc	cerebellar:	n/a	chr4:55707336-55707357
45	CTCF	chr4:55707260-55707410	GM12871	blood:	n/a	chr4:55707336-55707357
46	CTCF	chr4:55707266-55707454	LNCaP	prostate:	n/a	chr4:55707336-55707357
47	CTCF	chr4:55707276-55707444	Pancreas_OC	pancreas:	n/a	chr4:55707336-55707357
48	CTCF	chr4:55707248-55707470	LNCaP	prostate:	n/a	chr4:55707336-55707357
49	CTCF	chr4:55706740-55706890	HFF	foreskin:	n/a	chr4:55706810-55706828
50	CTCF	chr4:55707159-55707643	MCF-7	breast:	n/a	chr4:55707336-55707357

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:55708795-55708845	HEK293	kidney:	embryo
2	chr4:55708795-55708845	ovcar-3	ovarian:	n/a
3	chr4:55708795-55708845	BJ	skin:	n/a
4	chr4:55708795-55708845	NT2-D1	testis:	n/a
5	chr4:55708795-55708845	Jurkat	blood:	n/a
6	chr4:55708795-55708845	Hela-S3	cervix:	n/a
7	chr4:55708795-55708845	HCM	heart:	n/a
8	chr4:55708795-55708845	GM12878	blood:	n/a
9	chr4:55708795-55708845	CMK	blood:	n/a
10	chr4:55708795-55708845	HCT-116	colon:	n/a
11	chr4:55708795-55708845	AG04450	lung:	fetal
12	chr4:55708795-55708845	A549	lung:	n/a
13	chr4:55708795-55708845	PANC-1	pancreas:	n/a
14	chr4:55708795-55708845	SK-N-SH	brain:	n/a
15	chr4:55708795-55708845	NHDF-neo	bronchial:	n/a
16	chr4:55708795-55708845	NHBE	bronchial:	n/a
17	chr4:55708795-55708845	HRE	kidney:	n/a
18	chr4:55708795-55708845	BE2_C	brain:	n/a
19	chr4:55708795-55708845	ProgFib	skin:	n/a
20	chr4:55708795-55708845	SK-N-MC	brain:	n/a
21	chr4:55708795-55708845	SKMC	muscle:	n/a
22	chr4:55708795-55708845	HRCEpiC	kidney:	n/a
23	chr4:55708795-55708845	HRPEpiC	eye:	n/a
24	chr4:55708795-55708845	HNPCEpiC	eye:	n/a
25	chr4:55708795-55708845	U87	brain:	n/a
26	chr4:55708795-55708845	HMEC	breast:	n/a
27	chr4:55708795-55708845	IMR90	lung:	fetal
28	chr4:55708795-55708845	RPTEC	kidney:	n/a
29	chr4:55708795-55708845	AG04449	skin:	fetal
30	chr4:55708795-55708845	T-47D	breast:	n/a
31	chr4:55708795-55708845	GM12892	blood:	n/a
32	chr4:55708795-55708845	GM12891	blood:	n/a
33	chr4:55708795-55708845	HCPEpiC	choroid plexus:	n/a
34	chr4:55708795-55708845	HepG2	liver:	n/a
35	chr4:55708795-55708845	AG09319	gingival:	n/a
36	chr4:55708795-55708845	HCF	heart:	n/a
37	chr4:55708795-55708845	NH-A	brain:	n/a
38	chr4:55708795-55708845	PrEC	prostate:	n/a
39	chr4:55708795-55708845	AoSMC	blood vessel:	n/a
40	chr4:55708795-55708845	Caco-2	colon:	n/a
41	chr4:55708795-55708845	LNCaP	prostate:	n/a
42	chr4:55708795-55708845	HPAEpiC	pulmonary alveolar:	n/a
43	chr4:55708795-55708845	HUVEC	blood vessel:	n/a
44	chr4:55708795-55708845	Hepatocyte	liver:	n/a
45	chr4:55708795-55708845	MCF10A-Er-Src	breast:	n/a
46	chr4:55708795-55708845	SAEC	small airway:	n/a
47	chr4:55708795-55708845	MCF-7	breast:	n/a
48	chr4:55708795-55708845	GM19239	blood:	n/a
49	chr4:55708795-55708845	PFSK-1	brain:	n/a
50	chr4:55708795-55708845	HL-60	blood:	n/a

(count:18 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:55708346..55709146-chr4:55827430..55828429,3	MCF-7	breast:
2	chr4:55524498..55525559-chr4:55707838..55708970,3	MCF-7	breast:
3	chr4:55708184..55709079-chr4:55827341..55828314,6	MCF-7	breast:
4	chr4:55647754..55648646-chr4:55708231..55709242,4	MCF-7	breast:
5	chr4:55707866..55710526-chr4:55713081..55715385,2	MCF-7	breast:
6	chr4:55709352..55710601-chr4:55827349..55828342,6	MCF-7	breast:
7	chr4:55551469..55552431-chr4:55706923..55707730,2	MCF-7	breast:
8	chr4:55549261..55550394-chr4:55706621..55707808,6	MCF-7	breast:
9	chr4:55708286..55708872-chr4:55827341..55828280,4	MCF-7	breast:
10	chr4:55188829..55189372-chr4:55706928..55707723,2	MCF-7	breast:
11	chr4:55530214..55530911-chr4:55708178..55708744,2	MCF-7	breast:
12	chr4:55452869..55453638-chr4:55708509..55709111,2	MCF-7	breast:
13	chr4:55709352..55710256-chr4:55827349..55828342,4	MCF-7	breast:
14	chr4:55184800..55185406-chr4:55706810..55707325,2	MCF-7	breast:
15	chr4:55524498..55525559-chr4:55707619..55708970,5	MCF-7	breast:
16	chr4:55549430..55550445-chr4:55706754..55707711,7	MCF-7	breast:
17	chr4:55707866..55710526-chr4:55713081..55715385,2	MCF-7	breast:
18	chr4:55708158..55708934-chr4:55820918..55821668,3	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KDR-1	chr4:55702327-55702582	XLOC_003950
2	lnc-KDR-1	chr4:55711290-55711429	NONHSAT096427
3	lnc-KDR-1	chr4:55711093-55711568	XLOC_003950
4	lnc-KDR-1	chr4:55702335-55702582	NONHSAT096427
5	lnc-KIT-1	chr4:55711734-55711778	XLOC_003541

No data

Variant related genes	Relation type
ENSG00000249727	TF binding region
ENSG00000251256	TF binding region
ENSG00000249727	CpG island
ENSG00000251256	CpG island
RLF	miRNA target sites

Extended variants
information (count: 687 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:687 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1497490	chr4:55701134-55701135	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs140519917	chr4:55701164-55701165	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs577773675	chr4:55701196-55701197	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs1497491	chr4:55701251-55701252	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs189191806	chr4:55701295-55701296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs548688663	chr4:55701299-55701300	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs550044735	chr4:55701300-55701301	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs60412401	chr4:55701302-55701303	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs554004506	chr4:55701304-55701305	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs61446943	chr4:55701305-55701306	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs543287570	chr4:55701306-55701307	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs2646351	chr4:55701312-55701313	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs28711746	chr4:55701327-55701328	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs545148627	chr4:55701362-55701363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs4864929	chr4:55701378-55701379	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs375547329	chr4:55701417-55701418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs4864930	chr4:55701421-55701422	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs79656225	chr4:55701422-55701423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs561322566	chr4:55701487-55701488	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs202208992	chr4:55701507-55701508	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs191361935	chr4:55701511-55701512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs552274083	chr4:55701516-55701517	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs4864931	chr4:55701541-55701542	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs529763503	chr4:55701584-55701585	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs565935431	chr4:55701595-55701596	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs534820986	chr4:55701600-55701601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs551566779	chr4:55701605-55701606	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs571385397	chr4:55701606-55701607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs151327699	chr4:55701611-55701612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs537127891	chr4:55701654-55701655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs114183910	chr4:55701775-55701776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs145681958	chr4:55701832-55701833	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs536586947	chr4:55701839-55701840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs1846066	chr4:55701844-55701845	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs183547891	chr4:55701850-55701851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs545221912	chr4:55701872-55701873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs188709509	chr4:55701877-55701878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs1497492	chr4:55701918-55701919	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs544686938	chr4:55701930-55701931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs181271587	chr4:55701947-55701948	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs112904349	chr4:55701950-55701951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs546976976	chr4:55701951-55701952	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs28371907	chr4:55701995-55701996	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs186311829	chr4:55701996-55701997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs570767404	chr4:55702003-55702004	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs538090126	chr4:55702004-55702005	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs571451173	chr4:55702039-55702040	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs557412042	chr4:55702044-55702045	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs141031390	chr4:55702054-55702055	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs115609325	chr4:55702072-55702073	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	22183965	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	21922591	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Parkinson disease	21956041	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Glioblastoma multiforme	19435819	CNVD
Multiple myeloma	16616336	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Ovarian neoplasms	16753589	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Glioblastoma multiforme	21569311	CNVD
Glioblastoma	17504929	CNVD
Glioblastoma	16823502	CNVD
Melanoma	16908931	CNVD
Glioblastoma	20031968	CNVD
Medulloblastoma	19270706	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Olfactory neuroblastoma	18408657	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Rhabdomyosarcoma	16790082	CNVD
Gastrointestinal stromal cancer	17438095	CNVD
Colorectal cancer	16272173	CNVD
Lung cancer	19208797	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	19115005	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	21138945	CNVD
Cancer	20164920	CNVD
Cancer	22183965	CNVD
Autism	22543975	CNVD

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:55691200-55702200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr4:55698200-55703800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr4:55701000-55701200	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr4:55701200-55703400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr4:55702000-55704200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr4:55702200-55702600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr4:55702200-55704000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr4:55702600-55703600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr4:55703000-55703400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr4:55703400-55703800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr4:55703400-55703800	Enhancers	Brain Anterior Caudate	brain
12	chr4:55703400-55704200	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr4:55703400-55704200	Enhancers	Brain Hippocampus Middle	brain
14	chr4:55703600-55704200	Enhancers	Fetal Lung	lung
15	chr4:55703600-55704400	Enhancers	Brain Germinal Matrix	brain
16	chr4:55703800-55704000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr4:55703800-55704000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr4:55703800-55704200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr4:55703800-55704800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr4:55703800-55706200	Weak transcription	Brain Anterior Caudate	brain
21	chr4:55704000-55705600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr4:55704000-55708400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr4:55704200-55704600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr4:55704200-55704600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr4:55704200-55704600	Weak transcription	Brain Hippocampus Middle	brain
26	chr4:55704200-55707400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr4:55704200-55708600	Weak transcription	Fetal Lung	lung
28	chr4:55704400-55708400	Weak transcription	Brain Germinal Matrix	brain
29	chr4:55704600-55704800	Enhancers	Breast Myoepithelial Primary Cells	Breast
30	chr4:55704600-55704800	Enhancers	Brain Hippocampus Middle	brain
31	chr4:55704600-55712600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr4:55704800-55705800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr4:55704800-55706600	Weak transcription	Brain Hippocampus Middle	brain
34	chr4:55704800-55706800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
35	chr4:55705600-55711400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr4:55705800-55706800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr4:55706000-55708600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr4:55706600-55707400	Enhancers	Brain Hippocampus Middle	brain
39	chr4:55706600-55709000	Enhancers	Primary hematopoietic stem cells short term culture	blood
40	chr4:55706800-55707200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr4:55706800-55707200	Enhancers	Brain Substantia Nigra	brain
42	chr4:55706800-55709000	Enhancers	Primary hematopoietic stem cells	blood
43	chr4:55706800-55709800	Enhancers	Breast Myoepithelial Primary Cells	Breast
44	chr4:55707000-55708000	Enhancers	Fetal Heart	heart
45	chr4:55707000-55708800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
46	chr4:55707200-55707800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr4:55707200-55708800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr4:55707400-55707600	Enhancers	Brain Anterior Caudate	brain
49	chr4:55707400-55707800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr4:55707400-55708800	Weak transcription	Brain Hippocampus Middle	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links