Variant report

Variant	esv1838605
Chromosome Location	chr13:50509784-50514706
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:703)
CpG islands
(count:916)
Chromatin interactive
region (count:7)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:703 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr13:50509687-50509941	K562	blood:	n/a	n/a
2	ARID3A	chr13:50510329-50510674	HepG2	liver:	n/a	n/a
3	ATF2	chr13:50512307-50512772	GM12878	blood:	n/a	n/a
4	ATF2	chr13:50510316-50510780	GM12878	blood:	n/a	n/a
5	BACH1	chr13:50510772-50510900	K562	blood:	n/a	n/a
6	BACH1	chr13:50510029-50510970	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr13:50509542-50509896	GM12878	blood:	n/a	n/a
8	BCLAF1	chr13:50510129-50510881	GM12878	blood:	n/a	chr13:50510162-50510175 chr13:50510163-50510172
9	BCLAF1	chr13:50510202-50510786	GM12878	blood:	n/a	n/a
10	BHLHE40	chr13:50509839-50511188	K562	blood:	n/a	n/a
11	BHLHE40	chr13:50509936-50510135	GM12878	blood:	n/a	n/a
12	BHLHE40	chr13:50510341-50511268	GM12878	blood:	n/a	n/a
13	BHLHE40	chr13:50509964-50511018	HepG2	liver:	n/a	n/a
14	BRCA1	chr13:50510490-50510850	H1-hESC	embryonic stem cell:	n/a	n/a
15	BRCA1	chr13:50510473-50511157	GM12878	blood:	n/a	n/a
16	BRCA1	chr13:50510449-50510678	HepG2	liver:	n/a	n/a
17	CBX3	chr13:50510321-50510630	K562	blood:	n/a	n/a
18	CBX3	chr13:50510234-50510753	K562	blood:	n/a	n/a
19	CCNT2	chr13:50509871-50511160	K562	blood:	n/a	n/a
20	CEBPB	chr13:50510527-50510613	HepG2	liver:	n/a	n/a
21	CEBPB	chr13:50510426-50510606	H1-hESC	embryonic stem cell:	n/a	n/a
22	CEBPB	chr13:50509315-50510191	Hela-S3	cervix:	n/a	chr13:50509457-50509470
23	CEBPB	chr13:50510393-50510785	Hela-S3	cervix:	n/a	n/a
24	CEBPB	chr13:50510400-50510549	HepG2	liver:	n/a	n/a
25	CEBPD	chr13:50510229-50510590	HepG2	liver:	n/a	n/a
26	CHD1	chr13:50510000-50511174	GM12878	blood:	n/a	n/a
27	CHD2	chr13:50510263-50511024	GM12878	blood:	n/a	n/a
28	CHD2	chr13:50509831-50510953	Hela-S3	cervix:	n/a	chr13:50509968-50509978
29	CHD2	chr13:50509951-50510063	GM12878	blood:	n/a	chr13:50509968-50509978
30	CHD2	chr13:50510267-50511088	K562	blood:	n/a	n/a
31	CHD2	chr13:50510294-50510753	H1-hESC	embryonic stem cell:	n/a	n/a
32	CHD2	chr13:50510279-50510623	HepG2	liver:	n/a	n/a
33	CREB1	chr13:50509808-50510148	A549	lung:	n/a	n/a
34	CREB1	chr13:50509977-50510886	H1-hESC	embryonic stem cell:	n/a	n/a
35	CREB1	chr13:50510244-50510817	A549	lung:	n/a	n/a
36	CREB1	chr13:50512316-50512795	GM12878	blood:	n/a	n/a
37	CTBP2	chr13:50509931-50511246	H1-hESC	embryonic stem cell:	n/a	n/a
38	CTCF	chr13:50510420-50510570	K562	blood:	n/a	n/a
39	CTCF	chr13:50511000-50511150	RPTEC	kidney:	n/a	n/a
40	CTCF	chr13:50510400-50510550	Caco-2	colon:	n/a	n/a
41	CTCF	chr13:50510260-50510410	A549	lung:	n/a	n/a
42	CTCF	chr13:50510400-50510550	HepG2	liver:	n/a	n/a
43	CTCF	chr13:50510440-50510590	AG04450	lung:	n/a	n/a
44	CTCF	chr13:50510203-50510678	HepG2	liver:	n/a	n/a
45	CTCF	chr13:50510420-50510570	HMF	breast:	n/a	n/a
46	CTCF	chr13:50510316-50510655	Kidney_OC	kidney:	n/a	n/a
47	CTCF	chr13:50510400-50510550	HVMF	connective:	n/a	n/a
48	CTCF	chr13:50509984-50510010	MCF-7	breast:	n/a	n/a
49	CTCF	chr13:50510400-50510550	HL-60	blood:	n/a	n/a
50	CTCF	chr13:50510224-50510672	T-47D	breast:	n/a	n/a

(count:916 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:50510427-50510477	MCF-7	breast:	n/a
2	chr13:50510427-50510477	MCF-7	breast:	n/a
3	chr13:50513235-50513285	HRE	kidney:	n/a
4	chr13:50510151-50510201	GM12892	blood:	n/a
5	chr13:50513235-50513285	HNPCEpiC	eye:	n/a
6	chr13:50511900-50511950	Hepatocyte	liver:	n/a
7	chr13:50510427-50510477	PANC-1	pancreas:	n/a
8	chr13:50510704-50510754	HEK293	kidney:	embryo
9	chr13:50513235-50513285	NHBE	bronchial:	n/a
10	chr13:50510698-50510748	Hela-S3	cervix:	n/a
11	chr13:50510704-50510754	HCPEpiC	choroid plexus:	n/a
12	chr13:50509902-50509952	A549	lung:	n/a
13	chr13:50511071-50511121	ovcar-3	ovarian:	n/a
14	chr13:50511071-50511121	K562	blood:	n/a
15	chr13:50511082-50511132	HUVEC	blood vessel:	n/a
16	chr13:50510698-50510748	HRPEpiC	eye:	n/a
17	chr13:50510704-50510754	ECC-1	luminal epithelium:	n/a
18	chr13:50510739-50510789	SK-N-MC	brain:	n/a
19	chr13:50510414-50510464	HCPEpiC	choroid plexus:	n/a
20	chr13:50510151-50510201	LNCaP	prostate:	n/a
21	chr13:50511021-50511071	HL-60	blood:	n/a
22	chr13:50510822-50510872	NH-A	brain:	n/a
23	chr13:50511021-50511071	RPTEC	kidney:	n/a
24	chr13:50510414-50510464	CMK	blood:	n/a
25	chr13:50511082-50511132	U87	brain:	n/a
26	chr13:50511900-50511950	NT2-D1	testis:	n/a
27	chr13:50510698-50510748	HIPEpiC	eye:	n/a
28	chr13:50510151-50510201	H1-hESC	embryonic stem cell:	embryo
29	chr13:50511900-50511950	K562	blood:	n/a
30	chr13:50510551-50510601	GM12878	blood:	n/a
31	chr13:50511900-50511950	HCPEpiC	choroid plexus:	n/a
32	chr13:50510704-50510754	PrEC	prostate:	n/a
33	chr13:50510650-50510700	HRE	kidney:	n/a
34	chr13:50510739-50510789	RPTEC	kidney:	n/a
35	chr13:50510650-50510700	HAEpiC	amniotic membrane:	n/a
36	chr13:50510822-50510872	HL-60	blood:	n/a
37	chr13:50510739-50510789	H1-hESC	embryonic stem cell:	embryo
38	chr13:50510698-50510748	T-47D	breast:	n/a
39	chr13:50511900-50511950	HMEC	breast:	n/a
40	chr13:50510427-50510477	GM12892	blood:	n/a
41	chr13:50510414-50510464	BJ	skin:	n/a
42	chr13:50509902-50509952	NHBE	bronchial:	n/a
43	chr13:50510427-50510477	LNCaP	prostate:	n/a
44	chr13:50510414-50510464	GM19239	blood:	n/a
45	chr13:50513235-50513285	HEK293	kidney:	embryo
46	chr13:50510704-50510754	GM19239	blood:	n/a
47	chr13:50510650-50510700	GM12892	blood:	n/a
48	chr13:50510427-50510477	HNPCEpiC	eye:	n/a
49	chr13:50511021-50511071	A549	lung:	n/a
50	chr13:50510698-50510748	LNCaP	prostate:	n/a

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr13:50507293..50510312-chr13:50568081..50571220,3	MCF-7	breast:
2	chr13:50510515..50512106-chr13:51482735..51485474,2	K562	blood:
3	chr13:50509813..50511946-chr17:39844014..39846019,2	MCF-7	breast:
4	chr13:50509646..50512355-chr13:50514189..50517194,3	K562	blood:
5	chr13:50365136..50367359-chr13:50509492..50511604,3	MCF-7	breast:
6	chr13:50510078..50512694-chr13:50569483..50571768,3	MCF-7	breast:
7	chr13:50509071..50511034-chr13:50570092..50572951,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TRIM13-7	chr13:50511565-50512237	NONHSAT140128
2	lnc-TRIM13-7	chr13:50511944-50513226	NONHSAT033769
3	lnc-TRIM13-7	chr13:50510782-50513292	NONHSAT033768

No data

Variant related genes	Relation type
SPRYD7	TF binding region
SPRYD7	CpG island
ENSG00000136104	chromatin interactions
ENSG00000173812	chromatin interactions
ENSG00000123178	chromatin interactions
ENSG00000233672	chromatin interactions
ENSG00000102753	chromatin interactions
ENSG00000264864	chromatin interactions
ENSG00000204977	chromatin interactions

Extended variants
information (count: 162 )
Associated
traits (count: 123 )

Variant overlapped rSNPs/rCNVs (count:162 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9562941	chr13:50509784-50509785	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs549248358	chr13:50509787-50509788	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs376398465	chr13:50509792-50509793	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs546709429	chr13:50509802-50509803	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs192950636	chr13:50509816-50509817	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs139657719	chr13:50509830-50509831	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs550568510	chr13:50509872-50509873	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs142636061	chr13:50509884-50509885	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs151054794	chr13:50509903-50509904	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
10	rs369386639	chr13:50509932-50509933	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
11	rs571018086	chr13:50510033-50510034	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs9670083	chr13:50510199-50510200	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
13	rs113482191	chr13:50510206-50510207	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs201596264	chr13:50510225-50510226	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
15	rs376668172	chr13:50510226-50510227	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs557331245	chr13:50510236-50510237	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs112834666	chr13:50510238-50510239	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs575399425	chr13:50510245-50510246	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs371567028	chr13:50510269-50510270	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs143411983	chr13:50510284-50510285	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs145902169	chr13:50510291-50510292	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
22	rs61741935	chr13:50510300-50510301	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
23	rs564263741	chr13:50510324-50510325	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs374289723	chr13:50510340-50510341	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs573057874	chr13:50510354-50510355	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs113872052	chr13:50510359-50510360	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs138435129	chr13:50510364-50510365	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs377410431	chr13:50510375-50510376	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs1063181	chr13:50510401-50510402	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs529008293	chr13:50510409-50510410	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs543814410	chr13:50510417-50510418	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs200866128	chr13:50510418-50510419	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs532831917	chr13:50510503-50510504	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs552822690	chr13:50510551-50510552	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs544643080	chr13:50510572-50510573	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs570839982	chr13:50510581-50510582	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
37	rs528636482	chr13:50510586-50510587	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
38	rs546802913	chr13:50510598-50510599	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
39	rs370648527	chr13:50510604-50510605	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
40	rs535554832	chr13:50510607-50510608	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
41	rs533581676	chr13:50510617-50510618	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
42	rs569225748	chr13:50510642-50510643	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
43	rs539482790	chr13:50510652-50510653	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs376522204	chr13:50510710-50510711	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs374720163	chr13:50510715-50510716	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs369580263	chr13:50510721-50510722	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs139800603	chr13:50510743-50510744	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
48	rs74078717	chr13:50510752-50510753	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs555604217	chr13:50510784-50510785	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
50	rs541685808	chr13:50510808-50510809	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:123)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Squamous cell cancer	20885788	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Thyroid cancer	19087340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	17899364	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Colorectal cancer	16774939	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Myoepithelioma	18604193	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Trisomy	24170809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Alveolar rhabdomyosarcoma	16790082	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Prostate cancer	19242612	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	17245344	CNVD
Colorectal cancer	21586687	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Retinoblastoma	19183342	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Developmental delay	21147756	CNVD
Melanoma	18172304	CNVD
Retinoblastoma	21504564	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Mental retardation	17502991	CNVD
Retinoblastoma	17502991	CNVD
Bipolar disorder	18458673	CNVD
Liposarcoma	21253554	CNVD
T-cell lymphomas	19863542	CNVD
Cervical cancer	21062161	CNVD
microdeletion syndrome	19284877	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	17053054	CNVD
Multiple myeloma	19135901	CNVD
Autism	18414403	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Prostate cancer	16461572	CNVD
Merkel cell carcinoma	19020549	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	17550852	CNVD
Glioblastoma multiforme	19435819	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Congenital anomalies of the kidney and urinary tract	20467480	CNVD
Breast cancer	21858162	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute myeloid leukemia	17237825	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Myelofibrosis	22110671	CNVD
Hereditary prostate cancer	22028916	CNVD
Glioblastoma multiforme	22286061	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Prostate cancer	17217626	CNVD
Ovarian cancer	21781307	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Glioblastoma multiforme	21922591	CNVD
Metanephric adenoma	20802469	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21990379	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Colorectal cancer	21645411	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:430 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:50489200-50510000	Weak transcription	Spleen	Spleen
2	chr13:50500000-50509800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr13:50502600-50509800	Weak transcription	Gastric	stomach
4	chr13:50508800-50509800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr13:50508800-50509800	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr13:50508800-50509800	Flanking Active TSS	Osteobl	bone
7	chr13:50508800-50510400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr13:50508800-50511400	Active TSS	Right Atrium	heart
9	chr13:50509000-50509800	Weak transcription	Small Intestine	intestine
10	chr13:50509000-50510000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr13:50509000-50510800	Active TSS	Skeletal Muscle Female	skeletal muscle
12	chr13:50509000-50511400	Active TSS	A549	lung
13	chr13:50509000-50511400	Active TSS	K562	blood
14	chr13:50509000-50511600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr13:50509000-50511600	Active TSS	HMEC	breast
16	chr13:50509000-50511800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr13:50509200-50509800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
18	chr13:50509200-50509800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr13:50509200-50509800	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
20	chr13:50509200-50510000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr13:50509200-50510200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr13:50509200-50511400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr13:50509400-50509800	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr13:50509400-50509800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr13:50509400-50509800	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr13:50509400-50509800	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
27	chr13:50509400-50509800	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
28	chr13:50509400-50509800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
29	chr13:50509400-50509800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
30	chr13:50509400-50509800	Enhancers	Primary T killer memory cells from peripheral blood	blood
31	chr13:50509400-50509800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr13:50509400-50509800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
33	chr13:50509400-50509800	Flanking Active TSS	Brain Angular Gyrus	brain
34	chr13:50509400-50509800	Flanking Active TSS	Colon Smooth Muscle	Colon
35	chr13:50509400-50509800	Flanking Active TSS	Fetal Brain Female	brain
36	chr13:50509400-50509800	Flanking Active TSS	Fetal Heart	heart
37	chr13:50509400-50509800	Flanking Active TSS	Fetal Stomach	stomach
38	chr13:50509400-50509800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
39	chr13:50509400-50509800	Bivalent/Poised TSS	Thymus	Thymus
40	chr13:50509400-50509800	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
41	chr13:50509400-50510000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
42	chr13:50509400-50510000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
43	chr13:50509400-50510000	Flanking Active TSS	Adipose Nuclei	Adipose
44	chr13:50509400-50510000	Flanking Active TSS	Liver	Liver
45	chr13:50509400-50510000	Flanking Active TSS	Brain Anterior Caudate	brain
46	chr13:50509400-50510000	Flanking Active TSS	Brain Germinal Matrix	brain
47	chr13:50509400-50510000	Flanking Active TSS	Duodenum Mucosa	Duodenum
48	chr13:50509400-50510000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
49	chr13:50509400-50510000	Flanking Active TSS	HUVEC	blood vessel
50	chr13:50509400-50510200	Flanking Active TSS	Primary hematopoietic stem cells	blood

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