Variant report

Variant	esv1841827
Chromosome Location	chr1:246944502-246954313
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:193)
CpG islands
(count:672)
Chromatin interactive
region (count:11)
LncRNA
region (count:21)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:193 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr1:246952177-246952496	H1-hESC	embryonic stem cell:	n/a	n/a
2	BRCA1	chr1:246948780-246948917	GM12878	blood:	n/a	n/a
3	CBX3	chr1:246945245-246946092	K562	blood:	n/a	n/a
4	CEBPB	chr1:246945459-246945696	HepG2	liver:	n/a	n/a
5	CEBPB	chr1:246945440-246945711	IMR90	lung:	n/a	n/a
6	CHD2	chr1:246952470-246952539	HepG2	liver:	n/a	n/a
7	CHD2	chr1:246953803-246953918	HepG2	liver:	n/a	n/a
8	CHD2	chr1:246948608-246948795	HepG2	liver:	n/a	n/a
9	CHD2	chr1:246951297-246951689	HepG2	liver:	n/a	chr1:246951311-246951321
10	CTCF	chr1:246948918-246949193	GM19239	blood:	n/a	n/a
11	CTCF	chr1:246954272-246954278	NHEK	skin:	n/a	n/a
12	CTCF	chr1:246948900-246949050	NHLF	lung:	n/a	n/a
13	CTCF	chr1:246945840-246945990	HMF	breast:	n/a	n/a
14	CTCF	chr1:246949141-246949212	Spleen_OC	spleen:	n/a	n/a
15	CTCF	chr1:246945980-246946130	HCPEpiC	choroid plexus:	n/a	n/a
16	CTCF	chr1:246954246-246954271	NHEK	skin:	n/a	n/a
17	CTCF	chr1:246946060-246946210	HPAF	blood vessel:	n/a	n/a
18	CTCF	chr1:246945860-246946010	HPF	lung:	n/a	n/a
19	CTCF	chr1:246949027-246949087	GM13977	blood:	n/a	n/a
20	CTCF	chr1:246948160-246948310	HUVEC	blood vessel:	n/a	n/a
21	CTCF	chr1:246949208-246949231	GM19239	blood:	n/a	n/a
22	CTCF	chr1:246946080-246946230	AG04450	lung:	n/a	n/a
23	CTCF	chr1:246946060-246946210	HMF	breast:	n/a	n/a
24	CTCF	chr1:246949145-246949172	GM13977	blood:	n/a	n/a
25	CTCF	chr1:246945960-246946110	HBMEC	blood vessel:	n/a	n/a
26	CTCF	chr1:246948080-246948230	GM12865	blood:	n/a	n/a
27	CTCF	chr1:246948300-246948450	GM12871	blood:	n/a	chr1:246948379-246948392 chr1:246948379-246948388
28	CTCF	chr1:246948880-246949030	GM12870	blood:	n/a	n/a
29	CTCF	chr1:246945860-246946010	HPAF	blood vessel:	n/a	n/a
30	CTCF	chr1:246948260-246948410	HUVEC	blood vessel:	n/a	chr1:246948379-246948392 chr1:246948379-246948388
31	CTCF	chr1:246948520-246948670	AoAF	blood vessel:	n/a	n/a
32	CTCF	chr1:246945920-246946070	GM12868	blood:	n/a	n/a
33	CTCF	chr1:246945920-246946070	AG04450	lung:	n/a	n/a
34	CTCF	chr1:246948020-246948170	GM12874	blood:	n/a	n/a
35	CTCF	chr1:246945905-246945966	GM19239	blood:	n/a	n/a
36	E2F6	chr1:246945732-246946007	K562	blood:	n/a	n/a
37	E2F6	chr1:246948020-246948163	K562	blood:	n/a	n/a
38	ELF1	chr1:246948179-246948459	GM12878	blood:	n/a	chr1:246948354-246948367 chr1:246948357-246948366 chr1:246948315-246948324
39	ELF1	chr1:246948213-246948519	K562	blood:	n/a	chr1:246948354-246948367 chr1:246948357-246948366 chr1:246948315-246948324
40	ESR1	chr1:246948885-246949073	ECC-1	luminal epithelium:	n/a	n/a
41	FOSL2	chr1:246949906-246950354	HepG2	liver:	n/a	n/a
42	FOSL2	chr1:246946225-246946826	HepG2	liver:	n/a	n/a
43	FOSL2	chr1:246948503-246949443	HepG2	liver:	n/a	chr1:246948712-246948720 chr1:246948713-246948720 chr1:246948708-246948719
44	FOSL2	chr1:246946102-246946919	HepG2	liver:	n/a	n/a
45	FOXA1	chr1:246946300-246946837	HepG2	liver:	n/a	n/a
46	FOXA1	chr1:246948887-246949070	ECC-1	luminal epithelium:	n/a	n/a
47	FOXP2	chr1:246945778-246946287	PFSK-1	brain:	n/a	n/a
48	GABPA	chr1:246946349-246946694	HepG2	liver:	n/a	n/a
49	GABPA	chr1:246946410-246946804	Hela-S3	cervix:	n/a	n/a
50	GATA3	chr1:246948975-246949239	MCF-7	breast:	n/a	n/a

(count:672 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:246952495-246952545	BE2_C	brain:	n/a
2	chr1:246952495-246952545	BE2_C	brain:	n/a
3	chr1:246952362-246952412	Hela-S3	cervix:	n/a
4	chr1:246948597-246948647	U87	brain:	n/a
5	chr1:246948597-246948647	Caco-2	colon:	n/a
6	chr1:246952889-246952939	T-47D	breast:	n/a
7	chr1:246948597-246948647	Hela-S3	cervix:	n/a
8	chr1:246952495-246952545	GM06990	blood:	n/a
9	chr1:246953273-246953323	AG04450	lung:	fetal
10	chr1:246952048-246952098	HIPEpiC	eye:	n/a
11	chr1:246952495-246952545	ovcar-3	ovarian:	n/a
12	chr1:246952889-246952939	AG09319	gingival:	n/a
13	chr1:246954130-246954180	HL-60	blood:	n/a
14	chr1:246952508-246952558	GM12878	blood:	n/a
15	chr1:246953273-246953323	HRE	kidney:	n/a
16	chr1:246952048-246952098	GM12891	blood:	n/a
17	chr1:246954130-246954180	HEK293	kidney:	embryo
18	chr1:246952914-246952964	SAEC	small airway:	n/a
19	chr1:246952118-246952168	HRPEpiC	eye:	n/a
20	chr1:246952215-246952265	AG09319	gingival:	n/a
21	chr1:246952362-246952412	GM06990	blood:	n/a
22	chr1:246953273-246953323	AG10803	skin:	n/a
23	chr1:246952495-246952545	GM19239	blood:	n/a
24	chr1:246952118-246952168	HCM	heart:	n/a
25	chr1:246952495-246952545	SAEC	small airway:	n/a
26	chr1:246954130-246954180	BJ	skin:	n/a
27	chr1:246952889-246952939	Hela-S3	cervix:	n/a
28	chr1:246952495-246952545	HEK293	kidney:	embryo
29	chr1:246952048-246952098	HCM	heart:	n/a
30	chr1:246953273-246953323	HMEC	breast:	n/a
31	chr1:246953273-246953323	RPTEC	kidney:	n/a
32	chr1:246952215-246952265	HEK293	kidney:	embryo
33	chr1:246952362-246952412	Hepatocyte	liver:	n/a
34	chr1:246952914-246952964	CMK	blood:	n/a
35	chr1:246952362-246952412	H1-hESC	embryonic stem cell:	embryo
36	chr1:246952914-246952964	HMEC	breast:	n/a
37	chr1:246952508-246952558	NH-A	brain:	n/a
38	chr1:246952495-246952545	PrEC	prostate:	n/a
39	chr1:246952118-246952168	PrEC	prostate:	n/a
40	chr1:246952362-246952412	CMK	blood:	n/a
41	chr1:246952118-246952168	K562	blood:	n/a
42	chr1:246952495-246952545	T-47D	breast:	n/a
43	chr1:246952495-246952545	A549	lung:	n/a
44	chr1:246948597-246948647	K562	blood:	n/a
45	chr1:246954130-246954180	HCPEpiC	choroid plexus:	n/a
46	chr1:246948597-246948647	PrEC	prostate:	n/a
47	chr1:246952508-246952558	LNCaP	prostate:	n/a
48	chr1:246953273-246953323	Jurkat	blood:	n/a
49	chr1:246952215-246952265	HRE	kidney:	n/a
50	chr1:246948597-246948647	SK-N-SH_RA	brain:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:246943277..246944793-chr1:246945937..246947774,2	K562	blood:
2	chr1:246945490..246947572-chr1:246949447..246951570,2	K562	blood:
3	chr1:246940173..246942753-chr1:246943130..246945283,2	MCF-7	breast:
4	chr1:246946643..246948588-chr1:247104112..247106785,2	K562	blood:
5	chr1:246941244..246944008-chr1:246946969..246949951,3	MCF-7	breast:
6	chr1:246944573..246947572-chr1:246947936..246950947,5	K562	blood:
7	chr1:246942351..246945041-chr1:246952061..246954954,2	K562	blood:
8	chr1:246947185..246952305-chr1:246952338..246955724,5	K562	blood:
9	chr1:246951287..246953566-chr1:246953954..246955878,2	K562	blood:
10	chr1:246947863..246950737-chr1:246955534..246958026,3	K562	blood:
11	chr1:246939030..246940776-chr1:246947263..246949787,2	MCF-7	breast:

(count:21 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SCCPDH-1	chr1:246953748-246954148	NONHSAT139944
2	lnc-SCCPDH-1	chr1:246953748-246954148	NONHSAT010736
3	lnc-SCCPDH-1	chr1:246954044-246954148	XLOC_000643
4	lnc-SCCPDH-1	chr1:246952810-246953000	NONHSAT010738
5	lnc-SCCPDH-1	chr1:246953748-246955687	ENSG00000227953.2
6	lnc-SCCPDH-1	chr1:246954044-246954488	NONHSAT010738
7	lnc-SCCPDH-1	chr1:246952785-246953000	NONHSAT139944
8	lnc-SCCPDH-1	chr1:246952919-246953000	XLOC_000643
9	lnc-SCCPDH-1	chr1:246953926-246954148	XLOC_000643
10	lnc-SCCPDH-1	chr1:246947036-246947345	XLOC_000643
11	lnc-SCCPDH-1	chr1:246953748-246954148	NONHSAT010737
12	lnc-SCCPDH-1	chr1:246946701-246947345	NONHSAT010736
13	lnc-SCCPDH-1	chr1:246952396-246953000	ENSG00000227953.2
14	lnc-SCCPDH-1	chr1:246952810-246953000	NONHSAT010737
15	lnc-SCCPDH-1	chr1:246947201-246947345	NONHSAT010738
16	lnc-SCCPDH-1	chr1:246953748-246954788	XLOC_000643
17	lnc-SCCPDH-1	chr1:246953748-246954148	XLOC_000643
18	lnc-SCCPDH-1	chr1:246952810-246953000	XLOC_000643
19	lnc-SCCPDH-1	chr1:246952827-246953000	XLOC_000643
20	lnc-SCCPDH-1	chr1:246952694-246953000	NONHSAT010736
21	lnc-SCCPDH-1	chr1:246947183-246947345	NONHSAT010737

No data

Variant related genes	Relation type
KIF28P	TF binding region
ENSG00000227953	TF binding region
KIF28P	CpG island
ENSG00000227953	CpG island
ENSG00000223519	chromatin interactions
ENSG00000227953	chromatin interactions
E2F3	miRNA target sites
C9orf5	miRNA target sites
DDX3Y	miRNA target sites

Extended variants
information (count: 496 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:496 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7534805	chr1:246944502-246944503	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs544026977	chr1:246944512-246944513	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs144358314	chr1:246944536-246944537	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs562324302	chr1:246944606-246944607	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs570843860	chr1:246944664-246944665	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs539589165	chr1:246944681-246944682	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs6666756	chr1:246944735-246944736	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs575984293	chr1:246944746-246944747	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs535467567	chr1:246944765-246944766	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs575372101	chr1:246944788-246944789	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs142752852	chr1:246944789-246944790	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs7535104	chr1:246944812-246944813	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs540847772	chr1:246944887-246944888	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs183208797	chr1:246944913-246944914	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs112927627	chr1:246944965-246944966	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs147367179	chr1:246944981-246944982	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs34526093	chr1:246945071-246945072	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs77829671	chr1:246945110-246945111	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs544464570	chr1:246945154-246945155	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs542707012	chr1:246945160-246945161	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs562214206	chr1:246945165-246945166	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs139469308	chr1:246945175-246945176	Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs547668585	chr1:246945210-246945211	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs545927281	chr1:246945214-246945215	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs562654229	chr1:246945215-246945216	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs539649413	chr1:246945235-246945236	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs549825055	chr1:246945245-246945246	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs562993042	chr1:246945264-246945265	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs576421131	chr1:246945287-246945288	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs561177407	chr1:246945294-246945295	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs542314388	chr1:246945342-246945343	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs371450684	chr1:246945350-246945351	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs572231995	chr1:246945358-246945359	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs534958089	chr1:246945371-246945372	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs142526267	chr1:246945380-246945381	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs528494907	chr1:246945382-246945383	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs113175588	chr1:246945436-246945437	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs532927992	chr1:246945474-246945475	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs543649749	chr1:246945511-246945512	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs546642628	chr1:246945517-246945518	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs187948392	chr1:246945522-246945523	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs565593955	chr1:246945546-246945547	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs12058428	chr1:246945567-246945568	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs529947711	chr1:246945569-246945570	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs192857478	chr1:246945572-246945573	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs369157585	chr1:246945588-246945589	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs374267849	chr1:246945642-246945643	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs548025285	chr1:246945648-246945649	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs76815646	chr1:246945653-246945654	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs148375041	chr1:246945654-246945655	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Neuroblastoma	21899760	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	20729466	CNVD
Testicular germ cell tumor	18059402	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Basal cell lymphoma	17053054	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	21829676	CNVD
Multiple myeloma	16616336	CNVD
Ovarian cancer	21720365	CNVD
Glioblastoma multiforme	22291905	CNVD
Myelofibrosis	22110671	CNVD
Disease	21936942	CNVD
laryngomalacia	21936942	CNVD
GLUT3 deficiency syndrome	20509907	CNVD
Developmental delay	21373258	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Developmental delay	19490664	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Cutaneous malignant melanoma	18794153	CNVD
Astrocytoma	17934521	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Breast cancer	20409316	CNVD
Fibroblasts	17951408	CNVD
Lung cancer	17951408	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:689 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:246888400-246946400	Weak transcription	Small Intestine	intestine
2	chr1:246888600-246945600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr1:246902800-246952800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:246905000-246945800	Weak transcription	Psoas Muscle	Psoas
5	chr1:246921600-246945800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr1:246922200-246944600	Strong transcription	Fetal Muscle Trunk	muscle
7	chr1:246923200-246945000	Strong transcription	Fetal Muscle Leg	muscle
8	chr1:246924400-246945800	Weak transcription	Primary B cells from cord blood	blood
9	chr1:246925200-246952200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr1:246928800-246944800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr1:246932400-246945800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr1:246932400-246952000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr1:246932600-246948000	Strong transcription	Liver	Liver
14	chr1:246932600-246948600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr1:246932600-246948600	Weak transcription	Esophagus	oesophagus
16	chr1:246932800-246945000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr1:246932800-246945600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr1:246932800-246945800	Weak transcription	H1 Cell Line	embryonic stem cell
19	chr1:246932800-246948800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr1:246932800-246952400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr1:246932800-246956400	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr1:246933200-246945800	Weak transcription	Colon Smooth Muscle	Colon
23	chr1:246934400-246944800	Strong transcription	Fetal Intestine Large	intestine
24	chr1:246938400-246945800	Strong transcription	Fetal Stomach	stomach
25	chr1:246938400-246947200	Strong transcription	Fetal Intestine Small	intestine
26	chr1:246938600-246944600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr1:246938800-246945000	Strong transcription	Placenta	Placenta
28	chr1:246939000-246944600	Strong transcription	Skeletal Muscle Female	skeletal muscle
29	chr1:246939000-246944800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr1:246939000-246945600	Weak transcription	Fetal Heart	heart
31	chr1:246939200-246945000	Strong transcription	Stomach Smooth Muscle	stomach
32	chr1:246940200-246945800	Weak transcription	GM12878-XiMat	blood
33	chr1:246940200-246947600	Weak transcription	HUVEC	blood vessel
34	chr1:246940200-246948800	Weak transcription	Fetal Brain Male	brain
35	chr1:246940400-246944800	Weak transcription	NHDF-Ad	bronchial
36	chr1:246940400-246945600	Weak transcription	Right Ventricle	heart
37	chr1:246940400-246945800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr1:246940400-246949000	Weak transcription	Rectal Smooth Muscle	rectum
39	chr1:246940600-246944600	Weak transcription	Lung	lung
40	chr1:246940600-246944800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
41	chr1:246940600-246945600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
42	chr1:246940600-246945800	Weak transcription	Primary T cells from cord blood	blood
43	chr1:246940600-246945800	Weak transcription	Ovary	ovary
44	chr1:246940600-246945800	Weak transcription	Rectal Mucosa Donor 29	rectum
45	chr1:246940600-246948600	Weak transcription	Brain Angular Gyrus	brain
46	chr1:246940600-246948800	Weak transcription	Brain Cingulate Gyrus	brain
47	chr1:246940600-246948800	Weak transcription	Fetal Kidney	kidney
48	chr1:246940800-246945000	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr1:246940800-246945000	Weak transcription	HepG2	liver
50	chr1:246940800-246945200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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