Variant report

Variant	esv20633
Chromosome Location	chr5:150941705-150955343
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:169)
CpG islands
(count:305)
Chromatin interactive
region (count:14)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:169 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:150949027-150949033	K562	blood:	n/a	n/a
2	ATF2	chr5:150948700-150948986	GM12878	blood:	n/a	n/a
3	BATF	chr5:150948643-150949046	GM12878	blood:	n/a	n/a
4	BATF	chr5:150948708-150948948	GM12878	blood:	n/a	n/a
5	BHLHE40	chr5:150948879-150949010	GM12878	blood:	n/a	n/a
6	BRCA1	chr5:150948882-150949052	GM12878	blood:	n/a	n/a
7	CCNT2	chr5:150951260-150951384	K562	blood:	n/a	n/a
8	CHD2	chr5:150950126-150950508	H1-hESC	embryonic stem cell:	n/a	n/a
9	CHD2	chr5:150948722-150949095	GM12878	blood:	n/a	n/a
10	CHD2	chr5:150948835-150949099	K562	blood:	n/a	n/a
11	CTCF	chr5:150944118-150944222	HepG2	liver:	n/a	n/a
12	CTCF	chr5:150944126-150944236	K562	blood:	n/a	n/a
13	CTCF	chr5:150944100-150944250	K562	blood:	n/a	n/a
14	CTCF	chr5:150944142-150944309	K562	blood:	n/a	n/a
15	CTCF	chr5:150944142-150944236	Medullo	brain:	n/a	n/a
16	CTCF	chr5:150944109-150944266	HepG2	liver:	n/a	n/a
17	CTCF	chr5:150944140-150944290	HMEC	breast:	n/a	n/a
18	CTCF	chr5:150944120-150944270	GM06990	blood:	n/a	n/a
19	CTCF	chr5:150952120-150952270	NHEK	skin:	n/a	n/a
20	CTCF	chr5:150943980-150944130	HepG2	liver:	n/a	n/a
21	E2F4	chr5:150949669-150949899	MCF10A-Er-Src	breast:	n/a	n/a
22	E2F4	chr5:150954107-150954492	MCF10A-Er-Src	breast:	n/a	n/a
23	E2F4	chr5:150955088-150955125	MCF10A-Er-Src	breast:	n/a	n/a
24	E2F6	chr5:150950195-150950982	H1-hESC	embryonic stem cell:	n/a	chr5:150950687-150950694 chr5:150950687-150950694 chr5:150950686-150950695 chr5:150950687-150950694 chr5:150950686-150950698
25	E2F6	chr5:150950502-150950892	H1-hESC	embryonic stem cell:	n/a	chr5:150950687-150950694 chr5:150950687-150950694 chr5:150950686-150950695 chr5:150950687-150950694 chr5:150950686-150950698
26	EBF1	chr5:150948529-150948998	GM12878	blood:	n/a	n/a
27	EBF1	chr5:150948537-150949208	GM12878	blood:	n/a	n/a
28	EGR1	chr5:150948794-150948975	K562	blood:	n/a	n/a
29	EGR1	chr5:150948657-150949012	ECC-1	luminal epithelium:	n/a	n/a
30	EGR1	chr5:150948794-150949005	K562	blood:	n/a	n/a
31	EP300	chr5:150948268-150951579	ECC-1	luminal epithelium:	n/a	n/a
32	EP300	chr5:150949921-150950578	ECC-1	luminal epithelium:	n/a	n/a
33	EP300	chr5:150948396-150949311	ECC-1	luminal epithelium:	n/a	n/a
34	EP300	chr5:150948812-150948838	GM12878	blood:	n/a	n/a
35	ESR1	chr5:150949999-150950420	ECC-1	luminal epithelium:	n/a	n/a
36	ESR1	chr5:150948355-150949042	ECC-1	luminal epithelium:	n/a	n/a
37	ESR1	chr5:150950928-150951375	ECC-1	luminal epithelium:	n/a	n/a
38	ESR1	chr5:150950945-150951363	ECC-1	luminal epithelium:	n/a	n/a
39	ESR1	chr5:150950147-150950431	ECC-1	luminal epithelium:	n/a	n/a
40	ESR1	chr5:150948479-150949056	ECC-1	luminal epithelium:	n/a	n/a
41	ESR1	chr5:150948378-150949007	ECC-1	luminal epithelium:	n/a	n/a
42	FOS	chr5:150949647-150950033	MCF10A-Er-Src	breast:	n/a	chr5:150949821-150949833 chr5:150949816-150949827 chr5:150949823-150949831
43	FOS	chr5:150954136-150954492	MCF10A-Er-Src	breast:	n/a	chr5:150954343-150954350 chr5:150954341-150954350
44	FOS	chr5:150949674-150950017	MCF10A-Er-Src	breast:	n/a	chr5:150949821-150949833 chr5:150949816-150949827 chr5:150949823-150949831
45	FOS	chr5:150954124-150954506	MCF10A-Er-Src	breast:	n/a	chr5:150954343-150954350 chr5:150954341-150954350
46	FOS	chr5:150952359-150952597	MCF10A-Er-Src	breast:	n/a	n/a
47	FOS	chr5:150951994-150952110	MCF10A-Er-Src	breast:	n/a	n/a
48	FOS	chr5:150949605-150950035	MCF10A-Er-Src	breast:	n/a	chr5:150949821-150949833 chr5:150949816-150949827 chr5:150949823-150949831
49	FOS	chr5:150951918-150952670	MCF10A-Er-Src	breast:	n/a	chr5:150952301-150952315
50	FOS	chr5:150948813-150949005	MCF10A-Er-Src	breast:	n/a	n/a

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:150949152-150949202	AG09309	skin:	n/a
2	chr5:150948506-150948556	PrEC	prostate:	n/a
3	chr5:150948306-150948356	GM12891	blood:	n/a
4	chr5:150950000-150950050	HCPEpiC	choroid plexus:	n/a
5	chr5:150948306-150948356	T-47D	breast:	n/a
6	chr5:150950000-150950050	HPAEpiC	pulmonary alveolar:	n/a
7	chr5:150949152-150949202	MCF10A-Er-Src	breast:	n/a
8	chr5:150950000-150950050	AG10803	skin:	n/a
9	chr5:150949152-150949202	HCF	heart:	n/a
10	chr5:150948506-150948556	SK-N-SH	brain:	n/a
11	chr5:150948901-150948951	NB4	blood:	n/a
12	chr5:150948506-150948556	NH-A	brain:	n/a
13	chr5:150948306-150948356	CMK	blood:	n/a
14	chr5:150950000-150950050	NT2-D1	testis:	n/a
15	chr5:150949152-150949202	T-47D	breast:	n/a
16	chr5:150948306-150948356	SKMC	muscle:	n/a
17	chr5:150950000-150950050	CMK	blood:	n/a
18	chr5:150948506-150948556	LNCaP	prostate:	n/a
19	chr5:150948901-150948951	MCF-7	breast:	n/a
20	chr5:150948306-150948356	RPTEC	kidney:	n/a
21	chr5:150948306-150948356	AG04450	lung:	fetal
22	chr5:150948901-150948951	AG10803	skin:	n/a
23	chr5:150948506-150948556	AG04449	skin:	fetal
24	chr5:150949152-150949202	NHBE	bronchial:	n/a
25	chr5:150949152-150949202	AG04449	skin:	fetal
26	chr5:150948306-150948356	SAEC	small airway:	n/a
27	chr5:150948901-150948951	BE2_C	brain:	n/a
28	chr5:150948901-150948951	AG09319	gingival:	n/a
29	chr5:150949152-150949202	NT2-D1	testis:	n/a
30	chr5:150949152-150949202	HRPEpiC	eye:	n/a
31	chr5:150948306-150948356	HNPCEpiC	eye:	n/a
32	chr5:150948306-150948356	SK-N-SH_RA	brain:	n/a
33	chr5:150948506-150948556	HepG2	liver:	n/a
34	chr5:150950000-150950050	T-47D	breast:	n/a
35	chr5:150948901-150948951	PANC-1	pancreas:	n/a
36	chr5:150948901-150948951	HRE	kidney:	n/a
37	chr5:150950000-150950050	A549	lung:	n/a
38	chr5:150948506-150948556	HEK293	kidney:	embryo
39	chr5:150948506-150948556	PFSK-1	brain:	n/a
40	chr5:150948901-150948951	NH-A	brain:	n/a
41	chr5:150949152-150949202	H1-hESC	embryonic stem cell:	embryo
42	chr5:150948901-150948951	CMK	blood:	n/a
43	chr5:150948901-150948951	ProgFib	skin:	n/a
44	chr5:150949152-150949202	GM06990	blood:	n/a
45	chr5:150948306-150948356	HEK293	kidney:	embryo
46	chr5:150948506-150948556	GM12878	blood:	n/a
47	chr5:150949152-150949202	HRCEpiC	kidney:	n/a
48	chr5:150948901-150948951	AG04449	skin:	fetal
49	chr5:150949152-150949202	ovcar-3	ovarian:	n/a
50	chr5:150948306-150948356	Hepatocyte	liver:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:150949470..150952211-chr5:150958873..150961683,3	MCF-7	breast:
2	chr5:150950232..150951828-chr5:150992759..150995006,2	MCF-7	breast:
3	chr5:150951137..150953808-chr5:151149761..151151549,2	K562	blood:
4	chr5:150933953..150936226-chr5:150941566..150943074,2	K562	blood:
5	chr5:150939504..150942408-chr5:150945212..150947600,2	MCF-7	breast:
6	chr5:150933361..150936096-chr5:150939863..150943066,3	K562	blood:
7	chr5:150939504..150942408-chr5:150945212..150947600,2	MCF-7	breast:
8	chr5:150951358..150953690-chr5:150997302..150999283,2	MCF-7	breast:
9	chr5:150949333..150952291-chr5:151000084..151002404,2	MCF-7	breast:
10	chr5:150952384..150954279-chr5:150993014..150994959,2	MCF-7	breast:
11	chr5:150948647..150952629-chr5:150970748..150974404,4	MCF-7	breast:
12	chr5:150949275..150951752-chr5:151137668..151139701,2	K562	blood:
13	chr5:150947375..150949317-chr5:150951116..150952783,2	K562	blood:
14	chr5:150942025..150944523-chr5:150961662..150964571,2	K562	blood:

No data

Variant related genes	Relation type
FAT2	TF binding region
FAT2	CpG island
ENSG00000177556	chromatin interactions
ENSG00000145907	chromatin interactions
ENSG00000086570	chromatin interactions

Extended variants
information (count: 711 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:711 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs34346367	chr5:150941718-150941719	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs66495175	chr5:150941729-150941730	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs35908499	chr5:150941749-150941750	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs190165120	chr5:150941753-150941754	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs13158643	chr5:150941775-150941776	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs13159039	chr5:150941796-150941797	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs116215319	chr5:150941805-150941806	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs147868559	chr5:150941806-150941807	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs564029009	chr5:150941809-150941810	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs532415639	chr5:150941810-150941811	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs550538711	chr5:150941829-150941830	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs10052817	chr5:150941839-150941840	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs574054083	chr5:150941840-150941841	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs141558114	chr5:150941923-150941924	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs548617220	chr5:150942024-150942025	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs145378369	chr5:150942047-150942048	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs182455146	chr5:150942049-150942050	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552952713	chr5:150942050-150942051	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs76480934	chr5:150942052-150942053	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs571140274	chr5:150942074-150942075	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs537877929	chr5:150942084-150942085	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs556208588	chr5:150942126-150942127	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs367712024	chr5:150942134-150942135	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs112748918	chr5:150942138-150942139	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs577962287	chr5:150942156-150942157	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs10069540	chr5:150942179-150942180	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
27	rs553788371	chr5:150942180-150942181	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs186091673	chr5:150942196-150942197	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs563955911	chr5:150942200-150942201	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs10054406	chr5:150942211-150942212	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs190998599	chr5:150942229-150942230	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs575914905	chr5:150942280-150942281	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs147687475	chr5:150942286-150942287	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs141014900	chr5:150942304-150942305	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs150242681	chr5:150942331-150942332	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs541999718	chr5:150942356-150942357	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs114322462	chr5:150942361-150942362	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs78678612	chr5:150942392-150942393	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs79083375	chr5:150942394-150942395	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs138897540	chr5:150942401-150942402	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs56682171	chr5:150942406-150942407	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs375655801	chr5:150942408-150942409	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs561481430	chr5:150942444-150942445	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs112449945	chr5:150942446-150942447	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs528940647	chr5:150942450-150942451	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs369752599	chr5:150942473-150942474	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs571026454	chr5:150942514-150942515	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs547176403	chr5:150942531-150942532	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs532063362	chr5:150942562-150942563	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs148995005	chr5:150942590-150942591	Enhancers Genic enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Multiple myeloma	17550852	CNVD
Salivary gland tumor	18059337	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Renal cell carcinoma	19377443	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Renal cell carcinoma	18194544	CNVD
Renal cell carcinoma	18592004	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Hyperekplexia	16941485	CNVD
Myelofibrosis	22110671	CNVD
Crohn''s disease	20877625	CNVD
T-cell lymphomas	19863542	CNVD
Breast cancer	17603634	CNVD
Crohn''s disease	20106866	CNVD
Breast cancer	20409316	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Prostate cancer	18632612	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:150908200-150948000	Strong transcription	HMEC	breast
2	chr5:150908400-150944000	Strong transcription	NHEK	skin
3	chr5:150909200-150942400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr5:150911600-150942800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr5:150918200-150945400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr5:150931000-150942800	Weak transcription	Brain Angular Gyrus	brain
7	chr5:150934200-150949600	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr5:150937000-150948600	Weak transcription	Right Atrium	heart
9	chr5:150937600-150948600	Weak transcription	Adipose Nuclei	Adipose
10	chr5:150938600-150941800	Strong transcription	Esophagus	oesophagus
11	chr5:150940800-150942600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr5:150940800-150943200	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr5:150941400-150941800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr5:150941400-150942200	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr5:150941400-150942600	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr5:150941600-150942000	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr5:150941600-150942200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr5:150941800-150942200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr5:150941800-150942200	Genic enhancers	Esophagus	oesophagus
20	chr5:150942200-150942800	Strong transcription	Esophagus	oesophagus
21	chr5:150942400-150943400	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr5:150942600-150948400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr5:150942800-150944000	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr5:150942800-150945000	Weak transcription	Esophagus	oesophagus
25	chr5:150943200-150945200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
26	chr5:150943400-150945400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr5:150944000-150945400	Weak transcription	NHEK	skin
28	chr5:150944000-150948400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr5:150945000-150947600	Strong transcription	Esophagus	oesophagus
30	chr5:150945200-150946400	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
31	chr5:150945400-150945600	Weak transcription	Aorta	Aorta
32	chr5:150945400-150946000	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr5:150945400-150946000	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr5:150945400-150948400	Strong transcription	NHEK	skin
35	chr5:150946000-150948400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr5:150946000-150948800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr5:150946400-150948000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
38	chr5:150946800-150947600	Active TSS	Spleen	Spleen
39	chr5:150947600-150948000	Enhancers	Spleen	Spleen
40	chr5:150947600-150948400	Genic enhancers	Esophagus	oesophagus
41	chr5:150948000-150948400	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
42	chr5:150948000-150949600	Genic enhancers	HMEC	breast
43	chr5:150948000-150950200	Weak transcription	Spleen	Spleen
44	chr5:150948200-150948600	ZNF genes & repeats	GM12878-XiMat	blood
45	chr5:150948400-150948600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr5:150948400-150948600	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr5:150948400-150949200	Genic enhancers	NHEK	skin
48	chr5:150948400-150949600	Enhancers	Primary B cells from peripheral blood	blood
49	chr5:150948400-150949800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr5:150948400-150950000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links