Variant report

Variant	esv2421838
Chromosome Location	chr10:26687751-26689767
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 86 )
Associated
traits (count: 40 )

Variant overlapped rSNPs/rCNVs (count:86 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs142905298	chr10:26687758-26687759	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs117989187	chr10:26687765-26687766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs3006775	chr10:26687789-26687790	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs547175747	chr10:26687804-26687805	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs570443398	chr10:26687815-26687816	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs73594346	chr10:26687837-26687838	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs187974061	chr10:26687839-26687840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs117071976	chr10:26687866-26687867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs535218975	chr10:26687883-26687884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs555405875	chr10:26687886-26687887	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs147715388	chr10:26687889-26687890	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs141256794	chr10:26687895-26687896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs145127584	chr10:26687908-26687909	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs116692926	chr10:26687932-26687933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs376136628	chr10:26687963-26687964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs193085981	chr10:26688023-26688024	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs113912268	chr10:26688058-26688059	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs562740235	chr10:26688068-26688069	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs531705533	chr10:26688093-26688094	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs185878449	chr10:26688097-26688098	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs141916017	chr10:26688148-26688149	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs527758857	chr10:26688149-26688150	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs373669029	chr10:26688157-26688158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs560214246	chr10:26688160-26688161	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs35893478	chr10:26688166-26688167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs547237178	chr10:26688210-26688211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs570303687	chr10:26688223-26688224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs17746517	chr10:26688228-26688229	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs116115458	chr10:26688230-26688231	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs569566499	chr10:26688238-26688239	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs75726429	chr10:26688289-26688290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs555040942	chr10:26688301-26688302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs549170145	chr10:26688365-26688366	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs190400171	chr10:26688370-26688371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs534696101	chr10:26688385-26688386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs554413794	chr10:26688489-26688490	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs570707427	chr10:26688565-26688566	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs138627113	chr10:26688577-26688578	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs191994030	chr10:26688593-26688594	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs35025344	chr10:26688628-26688629	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs3006774	chr10:26688662-26688663	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs542238876	chr10:26688731-26688732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs148899544	chr10:26688732-26688733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs143567538	chr10:26688787-26688788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs541085783	chr10:26688809-26688810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs576199006	chr10:26688817-26688818	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs532927469	chr10:26688835-26688836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs549694349	chr10:26688905-26688906	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs563627264	chr10:26688906-26688907	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs117930980	chr10:26688961-26688962	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:40)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
small cell lung cancer	20016488	CNVD
Behavioral abnormalities	21522184	CNVD
Dysmorphic features	21522184	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Myelofibrosis	22110671	CNVD
Autism	21439084	CNVD
Maculopathy	20981449	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Adrenocortical carcinoma	18281524	CNVD
Breast cancer	21364760	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26681600-26688200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:26681600-26694200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:26689200-26689400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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