Variant report

Variant	rs554413794
Chromosome Location	chr10:26688489-26688490
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894975	chr10:26343356-27014467	Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
2	nsv1043832	chr10:26669040-26809400	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv2760104	chr10:26679548-26693124	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv6121	chr10:26683702-26697307	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
5	esv2431236	chr10:26684117-26690603	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
6	esv2252088	chr10:26684392-26689974	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
7	esv2457858	chr10:26684415-26690170	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
8	nsv514548	chr10:26685062-26688752	Weak transcription	n/a	n/a	inside rSNPs	n/a
9	esv15267	chr10:26685115-26689761	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv1807134	chr10:26685333-26689170	Weak transcription	n/a	n/a	inside rSNPs	n/a
11	esv1805472	chr10:26685333-26689595	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
12	esv1807678	chr10:26685333-26689595	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
13	esv1807764	chr10:26685333-26689595	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
14	esv1811304	chr10:26685333-26689595	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
15	nsv442173	chr10:26686155-26689765	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
16	esv1806304	chr10:26686155-26689767	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv1809884	chr10:26686155-26689767	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
18	esv2421838	chr10:26687751-26689767	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26681600-26694200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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