Variant report

Variant	esv275492
Chromosome Location	chr11:26663394-26667813
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 189 )
Associated
traits (count: 54 )

Variant overlapped rSNPs/rCNVs (count:189 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10835040	chr11:26663394-26663395	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs377562989	chr11:26663407-26663408	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs368927710	chr11:26663418-26663419	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs372386795	chr11:26663554-26663555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs61878645	chr11:26663580-26663581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs370370798	chr11:26663590-26663591	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs146445511	chr11:26663595-26663596	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs113311497	chr11:26663596-26663597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs374076375	chr11:26663614-26663615	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs200186766	chr11:26663626-26663627	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs548544793	chr11:26663674-26663675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs12574798	chr11:26663691-26663692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs536202258	chr11:26663698-26663699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs569964277	chr11:26663729-26663730	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs189988480	chr11:26663772-26663773	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs552073089	chr11:26663777-26663778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs74466117	chr11:26663787-26663788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs571465249	chr11:26663794-26663795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs4316465	chr11:26663862-26663863	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs534783257	chr11:26663869-26663870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs4344447	chr11:26663871-26663872	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs150137045	chr11:26663877-26663878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs576729432	chr11:26663890-26663891	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs113682567	chr11:26663941-26663942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs4494265	chr11:26663962-26663963	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs182197911	chr11:26663974-26663975	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs186683044	chr11:26664002-26664003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs71483424	chr11:26664011-26664012	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs4998800	chr11:26664019-26664020	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs4998799	chr11:26664024-26664025	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs576874604	chr11:26664029-26664030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs5790600	chr11:26664033-26664034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs5790601	chr11:26664034-26664035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs540729344	chr11:26664045-26664046	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs4317942	chr11:26664050-26664051	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs4562780	chr11:26664059-26664060	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs374485233	chr11:26664073-26664074	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs541825703	chr11:26664081-26664082	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs563610214	chr11:26664090-26664091	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs5790602	chr11:26664118-26664119	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs386362295	chr11:26664120-26664121	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs6416050	chr11:26664190-26664191	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs11029660	chr11:26664241-26664242	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs369657079	chr11:26664242-26664243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs72881737	chr11:26664249-26664250	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs7106245	chr11:26664271-26664272	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs568192890	chr11:26664286-26664287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs139017984	chr11:26664346-26664347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs372882835	chr11:26664354-26664355	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs372433155	chr11:26664357-26664358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:54)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Neuroticism	17667963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Ependymoma	20639864	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26645200-26671600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links