Variant report

Variant	esv2758047
Chromosome Location	chr6:35168116-35291002
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:35286036-35286912	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:35227129-35227629	K562	blood:	n/a	n/a
3	ARID3A	chr6:35172889-35173142	K562	blood:	n/a	n/a
4	ARID3A	chr6:35215709-35215952	K562	blood:	n/a	n/a
5	ARID3A	chr6:35265402-35265705	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:35226717-35228327	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:35208936-35209172	HepG2	liver:	n/a	n/a
8	ATF1	chr6:35231883-35232208	K562	blood:	n/a	n/a
9	ATF1	chr6:35273052-35273138	K562	blood:	n/a	n/a
10	ATF1	chr6:35226687-35227563	K562	blood:	n/a	n/a
11	ATF1	chr6:35237229-35237532	K562	blood:	n/a	n/a
12	ATF2	chr6:35270205-35271054	GM12878	blood:	n/a	n/a
13	ATF2	chr6:35226867-35227633	H1-hESC	embryonic stem cell:	n/a	chr6:35227231-35227242
14	ATF2	chr6:35265300-35265758	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr6:35265287-35265770	GM12878	blood:	n/a	n/a
16	ATF2	chr6:35206485-35206933	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr6:35226695-35227677	H1-hESC	embryonic stem cell:	n/a	chr6:35227231-35227242
18	ATF2	chr6:35226992-35227815	GM12878	blood:	n/a	chr6:35227231-35227242
19	ATF2	chr6:35265404-35265682	GM12878	blood:	n/a	n/a
20	ATF2	chr6:35226757-35227574	GM12878	blood:	n/a	chr6:35227231-35227242
21	ATF3	chr6:35227739-35227909	GM12878	blood:	n/a	n/a
22	ATF3	chr6:35226870-35227699	H1-hESC	embryonic stem cell:	n/a	chr6:35227232-35227243 chr6:35227232-35227240 chr6:35227233-35227243 chr6:35227233-35227240 chr6:35227231-35227242 chr6:35227229-35227244 chr6:35227229-35227242 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227244
23	ATF3	chr6:35265397-35265694	K562	blood:	n/a	n/a
24	ATF3	chr6:35226994-35227774	HepG2	liver:	n/a	chr6:35227233-35227240 chr6:35227229-35227244 chr6:35227232-35227243 chr6:35227231-35227244 chr6:35227229-35227242 chr6:35227232-35227240 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227242 chr6:35227233-35227243
25	ATF3	chr6:35227152-35227710	HepG2	liver:	n/a	chr6:35227232-35227243 chr6:35227232-35227240 chr6:35227233-35227243 chr6:35227233-35227240 chr6:35227231-35227242 chr6:35227229-35227244 chr6:35227229-35227242 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227244
26	ATF3	chr6:35226886-35227641	K562	blood:	n/a	chr6:35227232-35227243 chr6:35227232-35227240 chr6:35227233-35227243 chr6:35227233-35227240 chr6:35227231-35227242 chr6:35227229-35227244 chr6:35227229-35227242 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227244
27	ATF3	chr6:35226911-35227927	K562	blood:	n/a	chr6:35227232-35227243 chr6:35227232-35227240 chr6:35227233-35227243 chr6:35227233-35227240 chr6:35227231-35227242 chr6:35227229-35227244 chr6:35227229-35227242 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227244
28	ATF3	chr6:35226995-35227680	K562	blood:	n/a	chr6:35227232-35227243 chr6:35227232-35227240 chr6:35227233-35227243 chr6:35227233-35227240 chr6:35227231-35227242 chr6:35227229-35227244 chr6:35227229-35227242 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227244
29	ATF3	chr6:35227151-35227632	A549	lung:	n/a	chr6:35227232-35227243 chr6:35227232-35227240 chr6:35227233-35227243 chr6:35227233-35227240 chr6:35227231-35227242 chr6:35227229-35227244 chr6:35227229-35227242 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227244
30	ATF3	chr6:35226997-35227718	H1-hESC	embryonic stem cell:	n/a	chr6:35227232-35227243 chr6:35227232-35227240 chr6:35227233-35227243 chr6:35227233-35227240 chr6:35227231-35227242 chr6:35227229-35227244 chr6:35227229-35227242 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227244
31	ATF3	chr6:35227235-35227553	GM12878	blood:	n/a	n/a
32	ATF3	chr6:35227164-35227741	GM12878	blood:	n/a	chr6:35227232-35227243 chr6:35227232-35227240 chr6:35227233-35227243 chr6:35227233-35227240 chr6:35227231-35227242 chr6:35227229-35227244 chr6:35227229-35227242 chr6:35227232-35227252 chr6:35227231-35227242 chr6:35227231-35227244
33	BACH1	chr6:35216131-35216460	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr6:35181762-35182008	H1-hESC	embryonic stem cell:	n/a	n/a
35	BACH1	chr6:35286175-35286284	H1-hESC	embryonic stem cell:	n/a	n/a
36	BACH1	chr6:35183349-35183361	H1-hESC	embryonic stem cell:	n/a	n/a
37	BACH1	chr6:35216115-35216416	K562	blood:	n/a	n/a
38	BACH1	chr6:35265544-35265671	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr6:35286500-35286569	H1-hESC	embryonic stem cell:	n/a	n/a
40	BACH1	chr6:35227258-35228215	H1-hESC	embryonic stem cell:	n/a	n/a
41	BACH1	chr6:35181238-35181438	H1-hESC	embryonic stem cell:	n/a	n/a
42	BATF	chr6:35231904-35232195	GM12878	blood:	n/a	n/a
43	BATF	chr6:35265397-35265640	GM12878	blood:	n/a	n/a
44	BATF	chr6:35270408-35270653	GM12878	blood:	n/a	n/a
45	BATF	chr6:35231856-35232238	GM12878	blood:	n/a	n/a
46	BATF	chr6:35270300-35270670	GM12878	blood:	n/a	n/a
47	BCL3	chr6:35265314-35265873	GM12878	blood:	n/a	n/a
48	BCL3	chr6:35196237-35196582	GM12878	blood:	n/a	n/a
49	BCL3	chr6:35227031-35227688	A549	lung:	n/a	chr6:35227625-35227638
50	BCL3	chr6:35196263-35196552	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:35286315-35286365	Hepatocyte	liver:	n/a
2	chr6:35170850-35170900	U87	brain:	n/a
3	chr6:35181924-35181974	SK-N-SH_RA	brain:	n/a
4	chr6:35216799-35216849	NH-A	brain:	n/a
5	chr6:35226917-35226967	GM12892	blood:	n/a
6	chr6:35227228-35227278	HL-60	blood:	n/a
7	chr6:35181924-35181974	PFSK-1	brain:	n/a
8	chr6:35286315-35286365	Hepatocyte	liver:	n/a
9	chr6:35170850-35170900	U87	brain:	n/a
10	chr6:35181924-35181974	SK-N-SH_RA	brain:	n/a
11	chr6:35216799-35216849	NH-A	brain:	n/a
12	chr6:35226917-35226967	GM12892	blood:	n/a
13	chr6:35227228-35227278	HL-60	blood:	n/a
14	chr6:35181924-35181974	PFSK-1	brain:	n/a
15	chr6:35262113-35262163	HEEpiC	esophagus:	n/a
16	chr6:35177616-35177666	HAEpiC	amniotic membrane:	n/a
17	chr6:35177616-35177666	HEK293	kidney:	embryo
18	chr6:35265544-35265594	SK-N-MC	brain:	n/a
19	chr6:35230249-35230299	T-47D	breast:	n/a
20	chr6:35227408-35227458	HRE	kidney:	n/a
21	chr6:35227228-35227278	HCPEpiC	choroid plexus:	n/a
22	chr6:35265308-35265358	HMEC	breast:	n/a
23	chr6:35227318-35227368	HUVEC	blood vessel:	n/a
24	chr6:35227381-35227431	BE2_C	brain:	n/a
25	chr6:35286360-35286410	NH-A	brain:	n/a
26	chr6:35248951-35249001	ProgFib	skin:	n/a
27	chr6:35265411-35265461	MCF-7	breast:	n/a
28	chr6:35185397-35185447	NHDF-neo	bronchial:	n/a
29	chr6:35263297-35263347	H1-hESC	embryonic stem cell:	embryo
30	chr6:35227408-35227458	NT2-D1	testis:	n/a
31	chr6:35182910-35182960	AoSMC	blood vessel:	n/a
32	chr6:35180909-35180959	AG10803	skin:	n/a
33	chr6:35227318-35227368	RPTEC	kidney:	n/a
34	chr6:35227386-35227436	HRPEpiC	eye:	n/a
35	chr6:35265379-35265429	HEK293	kidney:	embryo
36	chr6:35263297-35263347	PFSK-1	brain:	n/a
37	chr6:35182216-35182266	U87	brain:	n/a
38	chr6:35286360-35286410	SAEC	small airway:	n/a
39	chr6:35265417-35265467	Caco-2	colon:	n/a
40	chr6:35230249-35230299	K562	blood:	n/a
41	chr6:35227515-35227565	AoSMC	blood vessel:	n/a
42	chr6:35227391-35227441	HMEC	breast:	n/a
43	chr6:35227408-35227458	GM06990	blood:	n/a
44	chr6:35263297-35263347	NB4	blood:	n/a
45	chr6:35255451-35255501	HUVEC	blood vessel:	n/a
46	chr6:35265417-35265467	T-47D	breast:	n/a
47	chr6:35265568-35265618	HL-60	blood:	n/a
48	chr6:35181401-35181451	SKMC	muscle:	n/a
49	chr6:35255451-35255501	HRE	kidney:	n/a
50	chr6:35265624-35265674	GM19239	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:35182919..35187135-chr6:35197439..35201271,4	K562	blood:
2	chr6:35203567..35205850-chr6:35210606..35213440,2	MCF-7	breast:
3	chr6:35216569..35221401-chr6:35225274..35227948,4	MCF-7	breast:
4	chr6:35261657..35264844-chr6:35438190..35440165,4	MCF-7	breast:
5	chr6:35178562..35181407-chr6:35198838..35201388,2	MCF-7	breast:
6	chr6:35196748..35200110-chr6:35208798..35212197,3	K562	blood:
7	chr6:35246677..35249056-chr6:35253744..35256144,2	MCF-7	breast:
8	chr6:35107772..35108596-chr6:35208578..35209321,2	MCF-7	breast:
9	chr6:34857178..34858858-chr6:35234868..35237489,2	MCF-7	breast:
10	chr6:35107459..35108346-chr6:35172584..35173465,3	K562	blood:
11	chr6:35209581..35211812-chr6:35214275..35216515,3	K562	blood:
12	chr6:35259972..35262009-chr6:35419216..35421184,2	MCF-7	breast:
13	chr6:35159595..35161669-chr6:35171600..35173649,2	K562	blood:
14	chr6:35232162..35233752-chr6:35239050..35241956,2	K562	blood:
15	chr6:35231872..35233836-chr6:35244161..35246644,2	K562	blood:
16	chr6:35172567..35174119-chr6:35186872..35189196,2	MCF-7	breast:
17	chr6:35146928..35151829-chr6:35162484..35168348,5	K562	blood:
18	chr6:35261989..35262828-chr6:35416846..35417449,3	MCF-7	breast:
19	chr6:35249084..35250623-chr6:35257544..35259252,2	K562	blood:
20	chr6:35265067..35266084-chr6:35435395..35436525,11	K562	blood:
21	chr6:35190929..35192629-chr6:35194228..35196176,2	K562	blood:
22	chr6:35177824..35181731-chr6:35185438..35190079,5	K562	blood:
23	chr6:35257372..35267692-chr6:35433856..35438688,25	K562	blood:
24	chr6:34855693..34857942-chr6:35191744..35194149,2	MCF-7	breast:
25	chr6:35270724..35273111-chr6:35465041..35467348,2	K562	blood:
26	chr6:35262020..35262812-chr6:35435703..35436724,4	MCF-7	breast:
27	chr6:35129806..35132792-chr6:35197170..35199424,2	MCF-7	breast:
28	chr6:35215391..35219513-chr6:35220347..35223844,6	K562	blood:
29	chr6:35086962..35089707-chr6:35186817..35189390,2	K562	blood:
30	chr6:35186126..35189088-chr6:35223923..35225540,2	K562	blood:
31	chr6:35265003..35267090-chr6:35463346..35464932,2	K562	blood:
32	chr6:35147410..35151273-chr6:35169982..35172318,3	MCF-7	breast:
33	chr6:35265781..35267678-chr6:35276247..35278257,2	MCF-7	breast:
34	chr6:35272471..35274544-chr6:35418755..35420339,2	K562	blood:
35	chr6:35278958..35282229-chr6:35283892..35290479,5	K562	blood:
36	chr6:35213830..35215728-chr6:35248385..35249951,2	K562	blood:
37	chr6:35182418..35185303-chr6:35197191..35199627,2	MCF-7	breast:
38	chr6:35170890..35173888-chr6:35185679..35187377,2	K562	blood:
39	chr6:34951497..34953140-chr6:35208526..35210483,2	K562	blood:
40	chr6:35172584..35173363-chr6:35208723..35209383,2	MCF-7	breast:
41	chr6:35260793..35263953-chr6:35263989..35266366,4	K562	blood:
42	chr19:2269411..2270247-chr6:35227292..35228062,2	Hela-S3	cervix:
43	chr6:34760038..34762450-chr6:35204039..35206411,2	K562	blood:
44	chr6:35112797..35115026-chr6:35176369..35178563,2	MCF-7	breast:
45	chr6:35254353..35255906-chr6:35265576..35267478,2	K562	blood:
46	chr6:35253934..35256378-chr6:35438296..35440191,2	K562	blood:
47	chr6:35217807..35220229-chr6:35225285..35228255,2	MCF-7	breast:
48	chr6:35131417..35136766-chr6:35169545..35174762,6	MCF-7	breast:
49	chr6:34856224..34858095-chr6:35226235..35229197,2	MCF-7	breast:
50	chr6:35267721..35269986-chr6:35284716..35286243,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TEAD3-5	chr6:35286571-35286928	ucscGeneNc_uc003oke_2
2	lnc-TCP11-2	chr6:35188147-35189134	NONHSAT112168
3	lnc-TCP11-2	chr6:35188147-35192407	ENSG00000272374.1
4	lnc-TCP11-1	chr6:35178593-35178950	NONHSAT112166
5	lnc-TCP11-1	chr6:35172923-35173184	NONHSAT112166
6	lnc-SCUBE3-1	chr6:35170798-35171095	NONHSAT112165
7	lnc-TCP11-4	chr6:35246954-35247193	NONHSAT112175
8	lnc-TCP11-3	chr6:35226104-35227196	NONHSAT112170
9	lnc-TCP11-4	chr6:35247509-35247596	NONHSAT112175
10	lnc-TEAD3-5	chr6:35280901-35281162	ucscGeneNc_uc003oke_2

Variant related genes	Relation type
ENSG00000217004	TF binding region
SCUBE3	TF binding region
ENSG00000272374	TF binding region
DEF6	TF binding region
ZNF76	TF binding region
ENSG00000217004	CpG island
SCUBE3	CpG island
ENSG00000272374	CpG island
DEF6	CpG island
ZNF76	CpG island
ENSG00000157343	chromatin interactions
ENSG00000112033	chromatin interactions
ENSG00000272374	chromatin interactions
ENSG00000064999	chromatin interactions
ENSG00000065154	chromatin interactions
ENSG00000167476	chromatin interactions
ENSG00000217004	chromatin interactions
ENSG00000232909	chromatin interactions
ENSG00000204120	chromatin interactions
ENSG00000104904	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000065029	chromatin interactions
ENSG00000140830	chromatin interactions
ENSG00000137309	chromatin interactions
ENSG00000223247	chromatin interactions
ENSG00000029364	chromatin interactions
ENSG00000023892	chromatin interactions
ENSG00000124678	chromatin interactions
ENSG00000064995	chromatin interactions
ENSG00000204569	chromatin interactions
ENSG00000112039	chromatin interactions
ENSG00000146197	chromatin interactions
ENSG00000198755	chromatin interactions
ENSG00000007866	chromatin interactions
ENSG00000100632	chromatin interactions
ENSG00000204568	chromatin interactions

Extended variants
information (count: 4347 )
Associated
traits (count: 109 )

Variant overlapped rSNPs/rCNVs (count:4347 , 50 per page) page: 1 2 3 4 5 6 7 ... 87

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs576011392	chr6:35168130-35168131	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs79183941	chr6:35168225-35168226	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs536799652	chr6:35168288-35168289	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs149732210	chr6:35168325-35168326	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs184545608	chr6:35168330-35168331	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs6900879	chr6:35168381-35168382	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs558501494	chr6:35168487-35168488	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs562506654	chr6:35168525-35168526	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs370292708	chr6:35168559-35168560	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs77866827	chr6:35168592-35168593	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs968828	chr6:35168613-35168614	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs539584188	chr6:35168630-35168631	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs189179929	chr6:35168633-35168634	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs574933245	chr6:35168634-35168635	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs566711384	chr6:35168658-35168659	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs541988867	chr6:35168719-35168720	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs563384587	chr6:35168723-35168724	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs60812576	chr6:35168771-35168772	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs139630870	chr6:35168890-35168891	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs192611012	chr6:35168896-35168897	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs528413207	chr6:35168930-35168931	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs546573055	chr6:35168933-35168934	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs57794912	chr6:35168984-35168985	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs113786887	chr6:35168994-35168995	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs141181990	chr6:35169029-35169030	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs72909059	chr6:35169043-35169044	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs537114390	chr6:35169044-35169045	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs72909061	chr6:35169049-35169050	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs184834613	chr6:35169055-35169056	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs151338011	chr6:35169070-35169071	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs368559730	chr6:35169080-35169081	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs553383653	chr6:35169099-35169100	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs575039527	chr6:35169109-35169110	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs189979872	chr6:35169118-35169119	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs73407643	chr6:35169123-35169124	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs578051533	chr6:35169131-35169132	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs371261761	chr6:35169133-35169134	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs575443444	chr6:35169158-35169159	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs73748062	chr6:35169175-35169176	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs181271151	chr6:35169191-35169192	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs564152861	chr6:35169216-35169217	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
42	rs528064696	chr6:35169224-35169225	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
43	rs546532970	chr6:35169264-35169265	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
44	rs540777741	chr6:35169294-35169295	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
45	rs73748063	chr6:35169344-35169345	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs529123928	chr6:35169403-35169404	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs550376713	chr6:35169433-35169434	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs560533523	chr6:35169446-35169447	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs530941667	chr6:35169455-35169456	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs113410713	chr6:35169456-35169457	Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:109)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Breast cancer	22522925	CNVD
small cell lung cancer	17426248	CNVD
Oligozoospermia	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Glioblastoma multiforme	21510904	CNVD

Chromatin state (count:4716 , 50 per page) page: 1 2 3 4 5 6 7 ... 95

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35154000-35169800	Weak transcription	Right Atrium	heart
2	chr6:35154400-35169200	Weak transcription	Fetal Heart	heart
3	chr6:35161600-35169400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:35161600-35170000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr6:35163200-35171200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:35163600-35171000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr6:35165200-35169400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr6:35165200-35171200	Weak transcription	NH-A	brain
9	chr6:35165600-35169400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr6:35166200-35168800	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr6:35167000-35168200	Enhancers	Brain Inferior Temporal Lobe	brain
12	chr6:35167000-35168400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr6:35167000-35168600	Enhancers	Brain Cingulate Gyrus	brain
14	chr6:35167000-35169200	Enhancers	HepG2	liver
15	chr6:35167200-35168200	Enhancers	Brain Hippocampus Middle	brain
16	chr6:35167200-35168400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
17	chr6:35167200-35168400	Enhancers	Brain Substantia Nigra	brain
18	chr6:35167400-35168400	Enhancers	Osteobl	bone
19	chr6:35167400-35168600	Enhancers	Brain Angular Gyrus	brain
20	chr6:35167600-35170200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr6:35167600-35171600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr6:35167800-35168200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr6:35167800-35168200	Enhancers	Brain Anterior Caudate	brain
24	chr6:35167800-35168600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr6:35167800-35168600	Enhancers	HMEC	breast
26	chr6:35167800-35169800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr6:35168000-35169400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr6:35168000-35171200	Weak transcription	Muscle Satellite Cultured Cells	--
29	chr6:35168200-35169600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr6:35168200-35169800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr6:35168200-35169800	Weak transcription	Brain Inferior Temporal Lobe	brain
32	chr6:35168200-35170000	Weak transcription	Brain Anterior Caudate	brain
33	chr6:35168200-35170000	Weak transcription	Brain Hippocampus Middle	brain
34	chr6:35168200-35176200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr6:35168400-35168600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr6:35168400-35168600	Enhancers	A549	lung
37	chr6:35168400-35169600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr6:35168400-35169800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr6:35168400-35169800	Weak transcription	Brain Substantia Nigra	brain
40	chr6:35168400-35169800	Weak transcription	Osteobl	bone
41	chr6:35168600-35170000	Weak transcription	Brain Angular Gyrus	brain
42	chr6:35168600-35170600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr6:35168800-35169800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr6:35168800-35169800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
45	chr6:35169000-35169200	Enhancers	Liver	Liver
46	chr6:35169200-35169600	Bivalent Enhancer	HepG2	liver
47	chr6:35169200-35170200	Weak transcription	Liver	Liver
48	chr6:35169200-35171400	Enhancers	Fetal Heart	heart
49	chr6:35169400-35169600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr6:35169400-35170200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell

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