Variant report

Variant	esv2758621
Chromosome Location	chr8:50886593-51137995
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr8:50968957-50969420	GM12878	blood:	n/a	n/a
2	ATF2	chr8:50969058-50969384	GM12878	blood:	n/a	n/a
3	BACH1	chr8:50892249-50892339	H1-hESC	embryonic stem cell:	n/a	n/a
4	BATF	chr8:51057978-51058142	GM12878	blood:	n/a	n/a
5	BATF	chr8:50969021-50969265	GM12878	blood:	n/a	n/a
6	BCL11A	chr8:50969028-50969333	GM12878	blood:	n/a	n/a
7	BCL11A	chr8:50969022-50969362	GM12878	blood:	n/a	n/a
8	BHLHE40	chr8:50969028-50969399	GM12878	blood:	n/a	n/a
9	BHLHE40	chr8:51038532-51038842	GM12878	blood:	n/a	chr8:51038771-51038792
10	BRCA1	chr8:50968793-50969924	Hela-S3	cervix:	n/a	n/a
11	BRCA1	chr8:50999011-50999073	Hela-S3	cervix:	n/a	n/a
12	CEBPB	chr8:50892514-50892801	H1-hESC	embryonic stem cell:	n/a	chr8:50892652-50892663
13	CEBPB	chr8:51052157-51052994	IMR90	lung:	n/a	chr8:51052494-51052505
14	CEBPB	chr8:50995529-50996028	HepG2	liver:	n/a	chr8:50995945-50995958 chr8:50995947-50995958 chr8:50995945-50995958 chr8:50995677-50995688
15	CEBPB	chr8:50946696-50947071	Hela-S3	cervix:	n/a	chr8:50946882-50946893
16	CEBPB	chr8:50892536-50892830	IMR90	lung:	n/a	chr8:50892652-50892663
17	CEBPB	chr8:50886882-50887168	HepG2	liver:	n/a	chr8:50887017-50887028
18	CEBPB	chr8:50886863-50887193	IMR90	lung:	n/a	chr8:50887017-50887028
19	CEBPB	chr8:50952445-50952812	IMR90	lung:	n/a	chr8:50952625-50952636 chr8:50952624-50952641 chr8:50952625-50952638
20	CEBPB	chr8:51013564-51013854	IMR90	lung:	n/a	n/a
21	CEBPB	chr8:50952403-50952800	Hela-S3	cervix:	n/a	chr8:50952625-50952636 chr8:50952624-50952641 chr8:50952625-50952638
22	CEBPB	chr8:50892563-50892820	MCF-7	breast:	n/a	chr8:50892652-50892663
23	CEBPB	chr8:51031956-51032118	HepG2	liver:	n/a	chr8:51032029-51032040 chr8:51032027-51032044
24	CEBPB	chr8:50998894-50999188	Hela-S3	cervix:	n/a	chr8:50999014-50999025
25	CEBPB	chr8:50898826-50899188	IMR90	lung:	n/a	chr8:50899007-50899018 chr8:50899008-50899017 chr8:50899006-50899019 chr8:50899006-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899006-50899019
26	CEBPB	chr8:50995609-50995738	A549	lung:	n/a	chr8:50995677-50995688
27	CEBPB	chr8:51137953-51138297	IMR90	lung:	n/a	chr8:51138124-51138135
28	CEBPB	chr8:50895535-50895822	IMR90	lung:	n/a	chr8:50895697-50895708 chr8:50895697-50895710 chr8:50895697-50895710
29	CEBPB	chr8:51137978-51138278	A549	lung:	n/a	chr8:51138124-51138135
30	CEBPB	chr8:50966647-50966977	Hela-S3	cervix:	n/a	n/a
31	CEBPB	chr8:50946710-50947079	IMR90	lung:	n/a	chr8:50946882-50946893
32	CEBPB	chr8:50946776-50946987	A549	lung:	n/a	chr8:50946882-50946893
33	CEBPB	chr8:50952411-50952877	A549	lung:	n/a	chr8:50952625-50952636 chr8:50952624-50952641 chr8:50952625-50952638
34	CEBPB	chr8:50998909-50999173	HepG2	liver:	n/a	chr8:50999014-50999025
35	CEBPB	chr8:50980388-50980486	K562	blood:	n/a	n/a
36	CEBPB	chr8:51013566-51013832	HepG2	liver:	n/a	n/a
37	CEBPB	chr8:50898862-50899156	K562	blood:	n/a	chr8:50899007-50899018 chr8:50899008-50899017 chr8:50899006-50899019 chr8:50899006-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899006-50899019
38	CEBPB	chr8:50980378-50980727	IMR90	lung:	n/a	chr8:50980523-50980534
39	CEBPB	chr8:50898821-50899173	HepG2	liver:	n/a	chr8:50899007-50899018 chr8:50899008-50899017 chr8:50899006-50899019 chr8:50899006-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899006-50899019
40	CEBPB	chr8:51052112-51052647	Hela-S3	cervix:	n/a	chr8:51052494-51052505
41	CEBPB	chr8:50915122-50915357	A549	lung:	n/a	chr8:50915245-50915256 chr8:50915245-50915258 chr8:50915245-50915258
42	CEBPB	chr8:50898917-50899117	H1-hESC	embryonic stem cell:	n/a	chr8:50899007-50899018 chr8:50899008-50899017 chr8:50899006-50899019 chr8:50899006-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899006-50899019
43	CEBPB	chr8:50980368-50980567	HepG2	liver:	n/a	chr8:50980523-50980534
44	CEBPB	chr8:50968742-50970637	IMR90	lung:	n/a	n/a
45	CEBPB	chr8:50946728-50947050	H1-hESC	embryonic stem cell:	n/a	chr8:50946882-50946893
46	CEBPB	chr8:50892510-50892881	MCF-7	breast:	n/a	chr8:50892652-50892663
47	CEBPB	chr8:51054545-51054599	K562	blood:	n/a	chr8:51054559-51054572 chr8:51054561-51054572 chr8:51054561-51054572
48	CEBPB	chr8:50886853-50887178	A549	lung:	n/a	chr8:50887017-50887028
49	CEBPB	chr8:50892466-50892843	HepG2	liver:	n/a	chr8:50892652-50892663
50	CEBPB	chr8:51056460-51056606	A549	lung:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:50892893-50892943	PANC-1	pancreas:	n/a
2	chr8:50892702-50892752	MCF10A-Er-Src	breast:	n/a
3	chr8:50892702-50892752	HCF	heart:	n/a
4	chr8:50891767-50891817	BE2_C	brain:	n/a
5	chr8:50891767-50891817	ovcar-3	ovarian:	n/a
6	chr8:50892702-50892752	AG09319	gingival:	n/a
7	chr8:50947399-50947449	NHDF-neo	bronchial:	n/a
8	chr8:51095593-51095643	IMR90	lung:	fetal
9	chr8:51039471-51039521	AG09319	gingival:	n/a
10	chr8:50892893-50892943	PFSK-1	brain:	n/a
11	chr8:50891848-50891898	HL-60	blood:	n/a
12	chr8:50891848-50891898	RPTEC	kidney:	n/a
13	chr8:50968578-50968628	HCF	heart:	n/a
14	chr8:50891767-50891817	MCF-7	breast:	n/a
15	chr8:51095593-51095643	BE2_C	brain:	n/a
16	chr8:50891864-50891914	Hepatocyte	liver:	n/a
17	chr8:51039471-51039521	BJ	skin:	n/a
18	chr8:50891864-50891914	HCT-116	colon:	n/a
19	chr8:50968578-50968628	Hepatocyte	liver:	n/a
20	chr8:50980859-50980909	HRE	kidney:	n/a
21	chr8:51095593-51095643	Hepatocyte	liver:	n/a
22	chr8:50947399-50947449	HMEC	breast:	n/a
23	chr8:50891864-50891914	HAEpiC	amniotic membrane:	n/a
24	chr8:50891848-50891898	GM12878	blood:	n/a
25	chr8:51095593-51095643	NB4	blood:	n/a
26	chr8:50892893-50892943	HPAEpiC	pulmonary alveolar:	n/a
27	chr8:50892702-50892752	HNPCEpiC	eye:	n/a
28	chr8:50892893-50892943	SK-N-MC	brain:	n/a
29	chr8:50892893-50892943	HNPCEpiC	eye:	n/a
30	chr8:51095593-51095643	GM12878	blood:	n/a
31	chr8:50892702-50892752	HCT-116	colon:	n/a
32	chr8:50892893-50892943	Hela-S3	cervix:	n/a
33	chr8:50891864-50891914	T-47D	breast:	n/a
34	chr8:50968578-50968628	ovcar-3	ovarian:	n/a
35	chr8:50904638-50904688	U87	brain:	n/a
36	chr8:50980859-50980909	Hela-S3	cervix:	n/a
37	chr8:50891848-50891898	Caco-2	colon:	n/a
38	chr8:50904638-50904688	SAEC	small airway:	n/a
39	chr8:50968578-50968628	RPTEC	kidney:	n/a
40	chr8:50980859-50980909	ProgFib	skin:	n/a
41	chr8:50891864-50891914	AG09309	skin:	n/a
42	chr8:50947399-50947449	GM12892	blood:	n/a
43	chr8:50947399-50947449	HepG2	liver:	n/a
44	chr8:50892893-50892943	HUVEC	blood vessel:	n/a
45	chr8:50892702-50892752	HEK293	kidney:	embryo
46	chr8:50891848-50891898	K562	blood:	n/a
47	chr8:50891767-50891817	NH-A	brain:	n/a
48	chr8:50891864-50891914	AG04450	lung:	fetal
49	chr8:50947399-50947449	HCF	heart:	n/a
50	chr8:50892702-50892752	LNCaP	prostate:	n/a

No.	Distal block	Cell Line	Cell type
1	chr8:50906818..50909515-chr8:50916418..50918690,2	K562	blood:
2	chr8:51050537..51053146-chr8:51056966..51059260,2	K562	blood:
3	chr8:50947214..50948091-chr8:51310516..51311364,3	MCF-7	breast:
4	chr8:50988839..50990732-chr8:50993883..50996257,2	K562	blood:
5	chr8:51030711..51032424-chr8:51036929..51039858,2	MCF-7	breast:
6	chr8:50925829..50927969-chr8:50932438..50935189,2	MCF-7	breast:
7	chr8:50709168..50710848-chr8:50931158..50933465,2	MCF-7	breast:
8	chr8:50988839..50990732-chr8:50993883..50996257,2	K562	blood:
9	chr8:51030711..51032424-chr8:51036929..51039858,2	MCF-7	breast:
10	chr8:51050537..51053146-chr8:51056966..51059260,2	K562	blood:
11	chr8:50947077..50947745-chr8:51310573..51311162,2	MCF-7	breast:
12	chr8:50925829..50927969-chr8:50932438..50935189,2	MCF-7	breast:
13	chr8:50906818..50909515-chr8:50916418..50918690,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C8orf22-14	chr8:51076059-51076529	NONHSAT126523
2	lnc-C8orf22-15	chr8:51085121-51085195	NONHSAT126524

Variant related genes	Relation type
SNTG1	TF binding region
SNTG1	CpG island

Extended variants
information (count: 7357 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:7357 , 50 per page) page: 1 2 3 4 5 6 7 ... 148

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs145357188	chr8:50886671-50886672	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs541993713	chr8:50886689-50886690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs540953400	chr8:50886698-50886699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs572574824	chr8:50886716-50886717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs115183263	chr8:50886724-50886725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs564452101	chr8:50886732-50886733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs372180313	chr8:50886749-50886750	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs572174740	chr8:50886757-50886758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs543013532	chr8:50886804-50886805	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs150396275	chr8:50886823-50886824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs562549561	chr8:50886854-50886855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs2129169	chr8:50886857-50886858	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs144922360	chr8:50886877-50886878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs149091300	chr8:50886883-50886884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs562248377	chr8:50886886-50886887	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs185586678	chr8:50886906-50886907	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs318901	chr8:50886934-50886935	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs143112695	chr8:50887002-50887003	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs16914122	chr8:50887046-50887047	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs62501376	chr8:50887068-50887069	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs148242059	chr8:50887074-50887075	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs188733376	chr8:50887076-50887077	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs181382773	chr8:50887086-50887087	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs553980532	chr8:50887128-50887129	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs11783503	chr8:50887153-50887154	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs375753277	chr8:50887157-50887158	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs557978701	chr8:50887176-50887177	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs547974037	chr8:50887204-50887205	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs116908720	chr8:50887231-50887232	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs73569366	chr8:50887262-50887263	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs561317036	chr8:50887276-50887277	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs528882834	chr8:50887336-50887337	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs541080346	chr8:50887360-50887361	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs11784278	chr8:50887386-50887387	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs533094403	chr8:50887417-50887418	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs551579096	chr8:50887438-50887439	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs533731106	chr8:50887441-50887442	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs117281816	chr8:50887504-50887505	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs550200062	chr8:50887508-50887509	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs142919251	chr8:50887509-50887510	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs549519014	chr8:50887568-50887569	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs147008640	chr8:50887569-50887570	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs570070373	chr8:50887573-50887574	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs75598145	chr8:50887574-50887575	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs535462869	chr8:50887577-50887578	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs138307503	chr8:50887595-50887596	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs186006724	chr8:50887649-50887650	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs539952375	chr8:50887679-50887680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs557894472	chr8:50887706-50887707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs576249959	chr8:50887716-50887717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
primary effusion lymphomas	17116491	CNVD
Esophageal cancer	20955586	CNVD
abnormal development	18461090	CNVD
Cancer	20164920	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	21251322	CNVD
Glioblastoma multiforme	22286061	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Melanoma	17363583	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Sezary syndrome	18413736	CNVD
Ovarian cancer	22174824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:581 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50876000-50889200	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr8:50887000-50887600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:50887600-50890000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:50889200-50889600	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr8:50889400-50889800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
6	chr8:50889600-50892000	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr8:50889800-50890800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr8:50890000-50890200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr8:50890200-50893600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr8:50890800-50891000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
11	chr8:50890800-50891200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr8:50891600-50892400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr8:50891800-50892400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr8:50892000-50894000	Enhancers	Cortex derived primary cultured neurospheres	brain
15	chr8:50892200-50892600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr8:50892200-50892600	Enhancers	Liver	Liver
17	chr8:50892200-50892600	Enhancers	Brain Germinal Matrix	brain
18	chr8:50892200-50893000	Enhancers	Fetal Brain Male	brain
19	chr8:50892600-50892800	Flanking Active TSS	Liver	Liver
20	chr8:50892600-50892800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
21	chr8:50892600-50893000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr8:50892600-50893000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr8:50892600-50893000	Flanking Active TSS	Brain Germinal Matrix	brain
24	chr8:50892600-50893000	Active TSS	Pancreatic Islets	Pancreatic Islet
25	chr8:50892800-50893000	Enhancers	Brain Anterior Caudate	brain
26	chr8:50892800-50893000	Active TSS	Brain Inferior Temporal Lobe	brain
27	chr8:50892800-50893000	Enhancers	Fetal Intestine Small	intestine
28	chr8:50892800-50893000	Enhancers	HMEC	breast
29	chr8:50892800-50893200	Active TSS	Liver	Liver
30	chr8:50892800-50894000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr8:50892800-50894000	Enhancers	Fetal Intestine Large	intestine
32	chr8:50893000-50893200	Weak transcription	Pancreatic Islets	Pancreatic Islet
33	chr8:50893000-50893600	Weak transcription	Fetal Intestine Small	intestine
34	chr8:50893000-50894000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr8:50893000-50894000	Enhancers	Brain Germinal Matrix	brain
36	chr8:50893200-50893600	Enhancers	Pancreatic Islets	Pancreatic Islet
37	chr8:50893200-50894200	Enhancers	Liver	Liver
38	chr8:50893400-50894200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr8:50893600-50894000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr8:50893600-50894200	Enhancers	Fetal Intestine Small	intestine
41	chr8:50894000-50895400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr8:50894000-50898600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr8:50894200-50895400	Weak transcription	Liver	Liver
44	chr8:50895400-50896600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr8:50895600-50895800	Enhancers	Liver	Liver
46	chr8:50896200-50896600	Enhancers	Brain Hippocampus Middle	brain
47	chr8:50898600-50901000	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr8:50901000-50901400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr8:50911600-50913800	Enhancers	Brain Germinal Matrix	brain
50	chr8:50911800-50913600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links