Variant report

Variant	esv2759662
Chromosome Location	chr9:7175387-7482982
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2349)
CpG islands
(count:305)
Chromatin interactive
region (count:31)
LncRNA
region (count:16)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2349 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr9:7336740-7337008	K562	blood:	n/a	n/a
2	ATF2	chr9:7284362-7284855	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr9:7300459-7300805	GM12878	blood:	n/a	n/a
4	ATF2	chr9:7297582-7298764	GM12878	blood:	n/a	n/a
5	ATF2	chr9:7297713-7298736	GM12878	blood:	n/a	n/a
6	BACH1	chr9:7320152-7320337	H1-hESC	embryonic stem cell:	n/a	chr9:7320268-7320282
7	BACH1	chr9:7359037-7359054	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr9:7228733-7228761	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr9:7442522-7442723	K562	blood:	n/a	n/a
10	BATF	chr9:7406218-7406591	GM12878	blood:	n/a	n/a
11	BATF	chr9:7406250-7406595	GM12878	blood:	n/a	n/a
12	BATF	chr9:7297886-7298564	GM12878	blood:	n/a	n/a
13	BATF	chr9:7303997-7304421	GM12878	blood:	n/a	n/a
14	BATF	chr9:7298070-7298505	GM12878	blood:	n/a	n/a
15	BATF	chr9:7300421-7300934	GM12878	blood:	n/a	chr9:7300691-7300702
16	BATF	chr9:7341645-7341859	GM12878	blood:	n/a	n/a
17	BATF	chr9:7234183-7234450	GM12878	blood:	n/a	n/a
18	BCL11A	chr9:7300492-7300901	GM12878	blood:	n/a	n/a
19	BCL11A	chr9:7300449-7300770	GM12878	blood:	n/a	n/a
20	BCL11A	chr9:7297974-7298581	GM12878	blood:	n/a	chr9:7298483-7298492 chr9:7298258-7298267
21	BCL11A	chr9:7298100-7298561	GM12878	blood:	n/a	chr9:7298483-7298492 chr9:7298258-7298267
22	BCL3	chr9:7297810-7298613	GM12878	blood:	n/a	chr9:7298483-7298492 chr9:7298258-7298267
23	BCL3	chr9:7298063-7298522	GM12878	blood:	n/a	chr9:7298483-7298492 chr9:7298258-7298267
24	BCL3	chr9:7300466-7300806	GM12878	blood:	n/a	n/a
25	BCL3	chr9:7216187-7216738	A549	lung:	n/a	n/a
26	BCLAF1	chr9:7297944-7298576	GM12878	blood:	n/a	chr9:7298483-7298492 chr9:7298258-7298267
27	BCLAF1	chr9:7297677-7298574	GM12878	blood:	n/a	chr9:7298483-7298492 chr9:7298258-7298267
28	BHLHE40	chr9:7297772-7298687	GM12878	blood:	n/a	n/a
29	BHLHE40	chr9:7341707-7341892	GM12878	blood:	n/a	n/a
30	BRCA1	chr9:7458103-7458303	Hela-S3	cervix:	n/a	n/a
31	BRCA1	chr9:7342313-7342456	Hela-S3	cervix:	n/a	n/a
32	BRCA1	chr9:7395166-7395231	Hela-S3	cervix:	n/a	n/a
33	CBX3	chr9:7186251-7186500	K562	blood:	n/a	n/a
34	CBX3	chr9:7313483-7313691	K562	blood:	n/a	n/a
35	CBX3	chr9:7186175-7186531	K562	blood:	n/a	n/a
36	CEBPB	chr9:7275455-7275764	HepG2	liver:	n/a	chr9:7275597-7275608
37	CEBPB	chr9:7363022-7363311	HepG2	liver:	n/a	chr9:7363154-7363163 chr9:7363154-7363163 chr9:7363154-7363163 chr9:7363154-7363163 chr9:7363152-7363163 chr9:7363154-7363165
38	CEBPB	chr9:7320038-7320643	IMR90	lung:	n/a	chr9:7320501-7320512
39	CEBPB	chr9:7185673-7186002	ECC-1	luminal epithelium:	n/a	chr9:7185769-7185786 chr9:7185774-7185785
40	CEBPB	chr9:7368505-7368764	HepG2	liver:	n/a	chr9:7368599-7368610
41	CEBPB	chr9:7202012-7202109	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr9:7336666-7336966	K562	blood:	n/a	n/a
43	CEBPB	chr9:7369493-7369693	A549	lung:	n/a	chr9:7369567-7369578
44	CEBPB	chr9:7210068-7210334	H1-hESC	embryonic stem cell:	n/a	chr9:7210187-7210198 chr9:7210186-7210197 chr9:7210186-7210199 chr9:7210186-7210197 chr9:7210186-7210199
45	CEBPB	chr9:7298141-7298457	GM12878	blood:	n/a	n/a
46	CEBPB	chr9:7342829-7343160	HepG2	liver:	n/a	chr9:7343002-7343013 chr9:7343004-7343015 chr9:7343002-7343015 chr9:7343004-7343015
47	CEBPB	chr9:7315857-7316122	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr9:7284431-7284782	H1-hESC	embryonic stem cell:	n/a	n/a
49	CEBPB	chr9:7232937-7233172	K562	blood:	n/a	n/a
50	CEBPB	chr9:7337917-7338117	HepG2	liver:	n/a	chr9:7338008-7338019 chr9:7338105-7338116

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:7478187-7478237	HL-60	blood:	n/a
2	chr9:7274452-7274502	RPTEC	kidney:	n/a
3	chr9:7478307-7478357	AoSMC	blood vessel:	n/a
4	chr9:7337085-7337135	Hela-S3	cervix:	n/a
5	chr9:7478307-7478357	A549	lung:	n/a
6	chr9:7380374-7380424	NT2-D1	testis:	n/a
7	chr9:7337085-7337135	AG10803	skin:	n/a
8	chr9:7337085-7337135	MCF-7	breast:	n/a
9	chr9:7380374-7380424	K562	blood:	n/a
10	chr9:7478307-7478357	HRCEpiC	kidney:	n/a
11	chr9:7337085-7337135	HCPEpiC	choroid plexus:	n/a
12	chr9:7274452-7274502	HCT-116	colon:	n/a
13	chr9:7478187-7478237	T-47D	breast:	n/a
14	chr9:7274452-7274502	ovcar-3	ovarian:	n/a
15	chr9:7274452-7274502	LNCaP	prostate:	n/a
16	chr9:7478187-7478237	NHDF-neo	bronchial:	n/a
17	chr9:7478307-7478357	HepG2	liver:	n/a
18	chr9:7337085-7337135	HepG2	liver:	n/a
19	chr9:7478307-7478357	U87	brain:	n/a
20	chr9:7337085-7337135	HRPEpiC	eye:	n/a
21	chr9:7478307-7478357	BE2_C	brain:	n/a
22	chr9:7380374-7380424	AG04450	lung:	fetal
23	chr9:7478187-7478237	NT2-D1	testis:	n/a
24	chr9:7274452-7274502	AoSMC	blood vessel:	n/a
25	chr9:7478307-7478357	Hepatocyte	liver:	n/a
26	chr9:7380374-7380424	NHBE	bronchial:	n/a
27	chr9:7274452-7274502	K562	blood:	n/a
28	chr9:7274452-7274502	GM19239	blood:	n/a
29	chr9:7337085-7337135	HCF	heart:	n/a
30	chr9:7337085-7337135	RPTEC	kidney:	n/a
31	chr9:7478307-7478357	PANC-1	pancreas:	n/a
32	chr9:7478187-7478237	AG04449	skin:	fetal
33	chr9:7274452-7274502	PANC-1	pancreas:	n/a
34	chr9:7478187-7478237	SAEC	small airway:	n/a
35	chr9:7337085-7337135	HAEpiC	amniotic membrane:	n/a
36	chr9:7380374-7380424	HMEC	breast:	n/a
37	chr9:7337085-7337135	H1-hESC	embryonic stem cell:	embryo
38	chr9:7380374-7380424	AG04449	skin:	fetal
39	chr9:7478307-7478357	LNCaP	prostate:	n/a
40	chr9:7478307-7478357	HRE	kidney:	n/a
41	chr9:7478187-7478237	AG09309	skin:	n/a
42	chr9:7337085-7337135	HEK293	kidney:	embryo
43	chr9:7274452-7274502	HAEpiC	amniotic membrane:	n/a
44	chr9:7478187-7478237	SKMC	muscle:	n/a
45	chr9:7274452-7274502	GM12891	blood:	n/a
46	chr9:7380374-7380424	U87	brain:	n/a
47	chr9:7478187-7478237	A549	lung:	n/a
48	chr9:7274452-7274502	ECC-1	luminal epithelium:	n/a
49	chr9:7478307-7478357	ovcar-3	ovarian:	n/a
50	chr9:7274452-7274502	NHBE	bronchial:	n/a

(count:31 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:7401862..7402674-chr9:7479089..7479897,2	MCF-7	breast:
2	chr9:7168923..7170527-chr9:7184801..7187324,2	MCF-7	breast:
3	chr9:7227823..7230431-chr9:7232012..7234490,2	K562	blood:
4	chr9:7401862..7402674-chr9:7479089..7479897,2	MCF-7	breast:
5	chr9:7227823..7230431-chr9:7232012..7234490,2	K562	blood:
6	chr9:7401751..7402674-chr9:7535710..7536817,3	MCF-7	breast:
7	chr9:7052694..7053246-chr9:7259513..7260136,3	MCF-7	breast:
8	chr9:7456877..7459465-chr9:7461939..7464244,2	K562	blood:
9	chr9:7193931..7197834-chr9:7198175..7201948,5	K562	blood:
10	chr1:64982456..64983122-chr9:7222631..7223173,2	MCF-7	breast:
11	chr9:7233905..7235874-chr9:7236903..7238823,2	K562	blood:
12	chr9:7248541..7250774-chr9:7255536..7257975,2	K562	blood:
13	chr13:72439560..72440061-chr9:7288393..7288893,2	NB4	blood:
14	chr9:7321841..7323561-chr9:7326191..7328579,2	K562	blood:
15	chr9:7093984..7094670-chr9:7259334..7260480,4	MCF-7	breast:
16	chr9:7382644..7384373-chr9:7388000..7390861,2	K562	blood:
17	chr9:7374746..7376747-chr9:7378885..7381827,2	K562	blood:
18	chr9:7456877..7459465-chr9:7461939..7464244,2	K562	blood:
19	chr9:7052132..7053116-chr9:7186335..7186921,2	K562	blood:
20	chr9:7198706..7201324-chr9:7202364..7204125,2	K562	blood:
21	chr9:7321841..7323561-chr9:7326191..7328579,2	K562	blood:
22	chr9:7248541..7250774-chr9:7255536..7257975,2	K562	blood:
23	chr9:7193931..7197834-chr9:7198175..7201948,5	K562	blood:
24	chr9:7233905..7235874-chr9:7236903..7238823,2	K562	blood:
25	chr9:7094001..7094660-chr9:7234238..7234769,2	MCF-7	breast:
26	chr9:7198706..7201324-chr9:7202364..7204125,2	K562	blood:
27	chr9:7382644..7384373-chr9:7388000..7390861,2	K562	blood:
28	chr9:7052698..7053251-chr9:7360197..7360994,2	K562	blood:
29	chr6:13710981..13713246-chr9:7352673..7355016,2	MCF-7	breast:
30	chr9:7374746..7376747-chr9:7378885..7381827,2	K562	blood:
31	chr9:7052501..7053186-chr9:7233839..7234508,2	MCF-7	breast:

(count:16 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KDM4C-4	chr9:7209772-7210156	NONHSAT130172
2	lnc-KDM4C-3	chr9:7202734-7202875	XLOC_007276
3	lnc-C9orf123-9	chr9:7335933-7336064	l_3732_chr9:7334596-7336064_thyroid
4	lnc-KDM4C-6	chr9:7327926-7328132	XLOC_007278
5	lnc-KDM4C-3	chr9:7177450-7178166	XLOC_007276
6	lnc-KDM4C-4	chr9:7208936-7208961	XLOC_007277
7	lnc-KDM4C-3	chr9:7178524-7178549	XLOC_007276
8	lnc-KDM4C-4	chr9:7209783-7209962	XLOC_007277
9	lnc-C9orf123-9	chr9:7335540-7335590	l_3732_chr9:7334596-7336064_thyroid
10	lnc-C9orf123-9	chr9:7334597-7335051	l_3732_chr9:7334596-7336064_thyroid
11	lnc-C9orf123-5	chr9:7344597-7345051	XLOC_007640
12	lnc-KDM4C-3	chr9:7177838-7178166	XLOC_007276
13	lnc-C9orf123-5	chr9:7345540-7345605	XLOC_007640
14	lnc-KDM4C-6	chr9:7343265-7343465	XLOC_007278
15	lnc-KDM4C-6	chr9:7304600-7304683	XLOC_007278
16	lnc-KDM4C-4	chr9:7208935-7208961	NONHSAT130172

No data

Variant related genes	Relation type
RPL4P5	TF binding region
RPL4P5	CpG island
ENSG00000010017	chromatin interactions
LASS2	miRNA target sites

Extended variants
information (count: 13608 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:13608 , 50 per page) page: 1 2 3 4 5 6 7 ... 273

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs533697156	chr9:7175405-7175406	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs367829124	chr9:7175408-7175409	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs566923653	chr9:7175455-7175456	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs576526539	chr9:7175499-7175500	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs372054505	chr9:7175500-7175501	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs200659356	chr9:7175533-7175534	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs543805017	chr9:7175618-7175619	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs943925	chr9:7175689-7175690	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs10976089	chr9:7175726-7175727	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs7045956	chr9:7175734-7175735	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs185424959	chr9:7175787-7175788	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs557188581	chr9:7175841-7175842	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs375779210	chr9:7175845-7175846	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs575118833	chr9:7175851-7175852	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs542369191	chr9:7175863-7175864	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs560660993	chr9:7175916-7175917	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs572646239	chr9:7175984-7175985	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs111395510	chr9:7176048-7176049	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs539940208	chr9:7176053-7176054	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs7018720	chr9:7176077-7176078	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs76456243	chr9:7176078-7176079	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs2820934	chr9:7176125-7176126	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs189408182	chr9:7176160-7176161	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs75791877	chr9:7176170-7176171	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs548757858	chr9:7176178-7176179	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs567060735	chr9:7176195-7176196	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs113214906	chr9:7176202-7176203	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs182056370	chr9:7176224-7176225	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs551835278	chr9:7176249-7176250	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs570772360	chr9:7176252-7176253	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs186088280	chr9:7176268-7176269	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs556980067	chr9:7176275-7176276	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs575157503	chr9:7176303-7176304	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs536133917	chr9:7176313-7176314	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs554392682	chr9:7176323-7176324	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs12349798	chr9:7176335-7176336	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs539985749	chr9:7176407-7176408	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs537466734	chr9:7176442-7176443	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs564957053	chr9:7176456-7176457	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs576783840	chr9:7176465-7176466	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs576236555	chr9:7176489-7176490	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs544146676	chr9:7176505-7176506	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs2820933	chr9:7176510-7176511	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs530458265	chr9:7176533-7176534	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs2820932	chr9:7176560-7176561	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs560702814	chr9:7176562-7176563	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs186385801	chr9:7176575-7176576	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs62532936	chr9:7176578-7176579	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs191284389	chr9:7176583-7176584	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs541651425	chr9:7176619-7176620	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Metastatic melanoma	18483359	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	16783165	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Renal cell carcinoma	21215367	CNVD
Chordoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1404 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:7148600-7185400	Weak transcription	HMEC	breast
2	chr9:7149600-7185400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr9:7149600-7186200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr9:7150400-7175800	Weak transcription	Rectal Smooth Muscle	rectum
5	chr9:7151800-7188600	Weak transcription	Colonic Mucosa	Colon
6	chr9:7160800-7182000	Weak transcription	Dnd41	blood
7	chr9:7162600-7181600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
8	chr9:7162600-7182200	Weak transcription	Small Intestine	intestine
9	chr9:7163200-7177800	Strong transcription	Primary B cells from peripheral blood	blood
10	chr9:7163400-7180600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr9:7163800-7179000	Strong transcription	Primary T helper cells fromperipheralblood	blood
12	chr9:7164000-7176200	Strong transcription	Primary T helper cells PMA-I stimulated	--
13	chr9:7164600-7178000	Strong transcription	Primary T cells fromperipheralblood	blood
14	chr9:7165800-7176200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr9:7165800-7179400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr9:7165800-7183800	Weak transcription	Esophagus	oesophagus
17	chr9:7165800-7185400	Weak transcription	Fetal Muscle Trunk	muscle
18	chr9:7166000-7175600	Weak transcription	Colon Smooth Muscle	Colon
19	chr9:7166200-7181000	Weak transcription	Hela-S3	cervix
20	chr9:7166400-7176800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr9:7167200-7185600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr9:7168200-7176400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr9:7169200-7183000	Strong transcription	Primary T cells from cord blood	blood
24	chr9:7169400-7176600	Strong transcription	Fetal Intestine Large	intestine
25	chr9:7169600-7176400	Strong transcription	Duodenum Mucosa	Duodenum
26	chr9:7169600-7176600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr9:7169600-7176800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr9:7169800-7176600	Strong transcription	Sigmoid Colon	Sigmoid Colon
29	chr9:7169800-7176600	Strong transcription	Monocytes-CD14+_RO01746	blood
30	chr9:7169800-7176800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
31	chr9:7169800-7177600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
32	chr9:7170000-7176400	Strong transcription	Adipose Nuclei	Adipose
33	chr9:7170000-7176400	Strong transcription	Rectal Mucosa Donor 31	rectum
34	chr9:7170800-7176600	Enhancers	Placenta	Placenta
35	chr9:7171000-7176400	Strong transcription	Thymus	Thymus
36	chr9:7171200-7188200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr9:7171200-7193000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr9:7172000-7182400	Weak transcription	Primary hematopoietic stem cells	blood
39	chr9:7172000-7183800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
40	chr9:7172200-7175400	Enhancers	Psoas Muscle	Psoas
41	chr9:7172200-7176600	Strong transcription	Fetal Intestine Small	intestine
42	chr9:7172600-7185400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
43	chr9:7172800-7176600	Weak transcription	Pancreatic Islets	Pancreatic Islet
44	chr9:7172800-7178600	Weak transcription	HUES6 Cell Line	embryonic stem cell
45	chr9:7172800-7185400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr9:7172800-7185400	Weak transcription	H9 Cell Line	embryonic stem cell
47	chr9:7172800-7185600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr9:7173000-7179000	Weak transcription	Brain Angular Gyrus	brain
49	chr9:7173000-7185600	Weak transcription	Stomach Smooth Muscle	stomach
50	chr9:7173200-7176800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

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