Variant report

Variant	esv3322085
Chromosome Location	chr11:63534376-63538774
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:63534499-63534607	HepG2	liver:	n/a	n/a
2	BACH1	chr11:63536471-63536586	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCLAF1	chr11:63535604-63536072	GM12878	blood:	n/a	chr11:63535839-63535852 chr11:63535889-63535902 chr11:63535629-63535638 chr11:63535802-63535815 chr11:63535712-63535725 chr11:63535714-63535727
4	BHLHE40	chr11:63535076-63535483	K562	blood:	n/a	n/a
5	BHLHE40	chr11:63535284-63536038	GM12878	blood:	n/a	n/a
6	BHLHE40	chr11:63536655-63536659	K562	blood:	n/a	n/a
7	BHLHE40	chr11:63535794-63535909	K562	blood:	n/a	n/a
8	BRCA1	chr11:63537437-63537555	HepG2	liver:	n/a	n/a
9	BRCA1	chr11:63535163-63535441	H1-hESC	embryonic stem cell:	n/a	n/a
10	BRCA1	chr11:63535795-63535974	HepG2	liver:	n/a	n/a
11	CCNT2	chr11:63535586-63536997	K562	blood:	n/a	chr11:63536360-63536369 chr11:63535628-63535637 chr11:63536844-63536853
12	CEBPB	chr11:63538260-63538568	MCF-7	breast:	n/a	n/a
13	CEBPB	chr11:63538245-63538604	HepG2	liver:	n/a	n/a
14	CEBPB	chr11:63535895-63535896	H1-hESC	embryonic stem cell:	n/a	n/a
15	CEBPB	chr11:63538243-63538616	IMR90	lung:	n/a	n/a
16	CEBPB	chr11:63538247-63538609	K562	blood:	n/a	n/a
17	CEBPB	chr11:63538250-63538541	K562	blood:	n/a	n/a
18	CEBPB	chr11:63538266-63538618	A549	lung:	n/a	n/a
19	CEBPB	chr11:63538255-63538587	A549	lung:	n/a	n/a
20	CEBPB	chr11:63538276-63538574	Hela-S3	cervix:	n/a	n/a
21	CEBPB	chr11:63538307-63538590	H1-hESC	embryonic stem cell:	n/a	n/a
22	CEBPD	chr11:63535463-63535984	HepG2	liver:	n/a	n/a
23	CEBPD	chr11:63535616-63535938	HepG2	liver:	n/a	n/a
24	CHD1	chr11:63535762-63535897	H1-hESC	embryonic stem cell:	n/a	n/a
25	CHD1	chr11:63535189-63535592	GM12878	blood:	n/a	n/a
26	CHD1	chr11:63535216-63535437	H1-hESC	embryonic stem cell:	n/a	n/a
27	CHD1	chr11:63535798-63535973	GM12878	blood:	n/a	n/a
28	CHD2	chr11:63535784-63535830	HepG2	liver:	n/a	n/a
29	CHD2	chr11:63535779-63536016	H1-hESC	embryonic stem cell:	n/a	n/a
30	CHD2	chr11:63535723-63536058	Hela-S3	cervix:	n/a	n/a
31	CHD2	chr11:63535756-63536052	K562	blood:	n/a	n/a
32	CHD2	chr11:63536271-63536878	Hela-S3	cervix:	n/a	n/a
33	CHD2	chr11:63535797-63536051	GM12878	blood:	n/a	n/a
34	CREB1	chr11:63535622-63536015	A549	lung:	n/a	n/a
35	CTBP2	chr11:63535241-63535932	H1-hESC	embryonic stem cell:	n/a	n/a
36	CTCF	chr11:63535713-63535940	GM13976	blood:	n/a	chr11:63535824-63535837 chr11:63535834-63535847 chr11:63535826-63535836 chr11:63535821-63535839 chr11:63535823-63535844 chr11:63535824-63535837 chr11:63535822-63535838 chr11:63535824-63535833
37	CTCF	chr11:63535760-63535910	HCT-116	colon:	n/a	chr11:63535824-63535837 chr11:63535834-63535847 chr11:63535826-63535836 chr11:63535821-63535839 chr11:63535823-63535844 chr11:63535824-63535837 chr11:63535822-63535838 chr11:63535824-63535833
38	CTCF	chr11:63535480-63535630	GM12866	blood:	n/a	n/a
39	CTCF	chr11:63535686-63536076	MCF-7	breast:	n/a	chr11:63535824-63535837 chr11:63535834-63535847 chr11:63535826-63535836 chr11:63535821-63535839 chr11:63535823-63535844 chr11:63535824-63535837 chr11:63535822-63535838 chr11:63535824-63535833
40	CTCF	chr11:63536900-63537050	GM12871	blood:	n/a	n/a
41	CTCF	chr11:63535720-63535870	AG09309	skin:	n/a	chr11:63535824-63535837 chr11:63535834-63535847 chr11:63535826-63535836 chr11:63535821-63535839 chr11:63535823-63535844 chr11:63535824-63535837 chr11:63535822-63535838 chr11:63535824-63535833
42	CTCF	chr11:63535780-63535930	GM12870	blood:	n/a	chr11:63535824-63535837 chr11:63535834-63535847 chr11:63535826-63535836 chr11:63535821-63535839 chr11:63535823-63535844 chr11:63535824-63535837 chr11:63535822-63535838 chr11:63535824-63535833
43	CTCF	chr11:63535600-63535750	HEEpiC	esophagus:	n/a	n/a
44	CTCF	chr11:63536260-63536410	RPTEC	kidney:	n/a	n/a
45	CTCF	chr11:63535320-63535470	HEK293	kidney:	n/a	n/a
46	CTCF	chr11:63536260-63536410	Caco-2	colon:	n/a	n/a
47	CTCF	chr11:63536880-63537030	WERI-Rb-1	eye:	n/a	n/a
48	CTCF	chr11:63535740-63535890	GM06990	blood:	n/a	chr11:63535824-63535837 chr11:63535834-63535847 chr11:63535826-63535836 chr11:63535821-63535839 chr11:63535823-63535844 chr11:63535824-63535837 chr11:63535822-63535838 chr11:63535824-63535833
49	CTCF	chr11:63535700-63535850	GM12868	blood:	n/a	chr11:63535824-63535837 chr11:63535834-63535847 chr11:63535826-63535836 chr11:63535821-63535839 chr11:63535823-63535844 chr11:63535824-63535837 chr11:63535822-63535838 chr11:63535824-63535833
50	CTCF	chr11:63535740-63535890	WERI-Rb-1	eye:	n/a	chr11:63535824-63535837 chr11:63535834-63535847 chr11:63535826-63535836 chr11:63535821-63535839 chr11:63535823-63535844 chr11:63535824-63535837 chr11:63535822-63535838 chr11:63535824-63535833

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:63536855-63536905	HEEpiC	esophagus:	n/a
2	chr11:63536855-63536905	HEEpiC	esophagus:	n/a
3	chr11:63537459-63537509	NB4	blood:	n/a
4	chr11:63537378-63537428	PANC-1	pancreas:	n/a
5	chr11:63535821-63535871	Hepatocyte	liver:	n/a
6	chr11:63536855-63536905	ECC-1	luminal epithelium:	n/a
7	chr11:63537459-63537509	NHDF-neo	bronchial:	n/a
8	chr11:63536330-63536380	T-47D	breast:	n/a
9	chr11:63535821-63535871	BE2_C	brain:	n/a
10	chr11:63535821-63535871	AG04450	lung:	fetal
11	chr11:63535358-63535408	NHDF-neo	bronchial:	n/a
12	chr11:63536330-63536380	MCF10A-Er-Src	breast:	n/a
13	chr11:63535358-63535408	Jurkat	blood:	n/a
14	chr11:63535358-63535408	GM12892	blood:	n/a
15	chr11:63535821-63535871	PANC-1	pancreas:	n/a
16	chr11:63537459-63537509	AoSMC	blood vessel:	n/a
17	chr11:63535358-63535408	HMEC	breast:	n/a
18	chr11:63537378-63537428	ProgFib	skin:	n/a
19	chr11:63535358-63535408	SK-N-MC	brain:	n/a
20	chr11:63536330-63536380	SKMC	muscle:	n/a
21	chr11:63536330-63536380	IMR90	lung:	fetal
22	chr11:63535358-63535408	IMR90	lung:	fetal
23	chr11:63537378-63537428	GM06990	blood:	n/a
24	chr11:63537459-63537509	HUVEC	blood vessel:	n/a
25	chr11:63536330-63536380	AG09309	skin:	n/a
26	chr11:63535358-63535408	RPTEC	kidney:	n/a
27	chr11:63535821-63535871	HCPEpiC	choroid plexus:	n/a
28	chr11:63535821-63535871	BJ	skin:	n/a
29	chr11:63536330-63536380	AG04450	lung:	fetal
30	chr11:63535358-63535408	SAEC	small airway:	n/a
31	chr11:63535821-63535871	SK-N-MC	brain:	n/a
32	chr11:63535358-63535408	Caco-2	colon:	n/a
33	chr11:63536855-63536905	ProgFib	skin:	n/a
34	chr11:63536855-63536905	Caco-2	colon:	n/a
35	chr11:63536855-63536905	HRPEpiC	eye:	n/a
36	chr11:63537459-63537509	Hepatocyte	liver:	n/a
37	chr11:63535821-63535871	HNPCEpiC	eye:	n/a
38	chr11:63536330-63536380	U87	brain:	n/a
39	chr11:63536855-63536905	IMR90	lung:	fetal
40	chr11:63536330-63536380	ProgFib	skin:	n/a
41	chr11:63535821-63535871	HIPEpiC	eye:	n/a
42	chr11:63536330-63536380	NT2-D1	testis:	n/a
43	chr11:63535821-63535871	IMR90	lung:	fetal
44	chr11:63536855-63536905	GM12892	blood:	n/a
45	chr11:63536855-63536905	HAEpiC	amniotic membrane:	n/a
46	chr11:63536855-63536905	RPTEC	kidney:	n/a
47	chr11:63536330-63536380	Hepatocyte	liver:	n/a
48	chr11:63537459-63537509	HRE	kidney:	n/a
49	chr11:63535821-63535871	Hela-S3	cervix:	n/a
50	chr11:63536855-63536905	HRE	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:63536948..63539321-chr11:63636062..63638062,2	K562	blood:
2	chr11:63534532..63537273-chr11:63602993..63606665,6	K562	blood:
3	chr11:63533773..63537846-chr11:63579275..63583196,6	MCF-7	breast:
4	chr11:63534918..63536804-chr11:63668712..63670378,2	MCF-7	breast:
5	chr11:63535469..63537285-chr11:63604590..63607809,3	MCF-7	breast:
6	chr11:63536537..63538641-chr11:63540593..63542800,2	MCF-7	breast:
7	chr11:63529280..63533473-chr11:63536389..63539836,6	MCF-7	breast:
8	chr11:63532131..63538052-chr11:63579345..63585604,10	K562	blood:
9	chr11:63533629..63535902-chr11:63537475..63539173,2	MCF-7	breast:
10	chr11:63533005..63535080-chr11:63601950..63603947,2	MCF-7	breast:
11	chr11:63535119..63536047-chr11:63580566..63581171,3	HCT-116	colon:
12	chr11:63535254..63537273-chr11:63604196..63606665,2	K562	blood:
13	chr11:63532069..63539323-chr11:63579489..63583130,14	MCF-7	breast:
14	chr1:89566099..89566939-chr11:63533954..63534897,2	MCF-7	breast:
15	chr11:63531277..63535286-chr11:63705300..63707994,3	MCF-7	breast:
16	chr11:63536047..63538392-chr11:63603133..63607498,3	MCF-7	breast:
17	chr11:63535590..63537125-chr11:63584534..63586620,2	MCF-7	breast:
18	chr11:63536456..63536965-chr21:41500878..41501548,2	MCF-7	breast:
19	chr11:63532131..63535124-chr11:63579146..63582872,4	K562	blood:
20	chr11:63535119..63536110-chr11:63688278..63689081,3	K562	blood:
21	chr11:63534031..63536529-chr11:63677173..63679815,2	K562	blood:
22	chr11:63536780..63538591-chr11:63740958..63743379,2	K562	blood:
23	chr11:63448182..63450282-chr11:63533461..63536298,4	MCF-7	breast:
24	chr11:63535711..63538179-chr11:63649382..63651942,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ATL3-1	chr11:63534816-63535026	ENSG00000255651.2
2	lnc-ATL3-1	chr11:63535956-63536113	ENSG00000255651.2
3	lnc-RCOR2-1	chr11:63538430-63538655	XLOC_009458
4	lnc-ATL3-1	chr11:63535956-63536113	ENSG00000255651.1
5	lnc-ATL3-1	chr11:63534858-63534962	NONHSAT021906
6	lnc-ATL3-1	chr11:63534956-63535026	ENSG00000255651.1
7	lnc-ATL3-1	chr11:63535956-63536058	NONHSAT021906

Variant related genes	Relation type
C11orf95	TF binding region
ENSG00000255651	TF binding region
C11orf95	CpG island
ENSG00000255651	CpG island
ENSG00000133318	chromatin interactions
ENSG00000110583	chromatin interactions
ENSG00000167771	chromatin interactions
ENSG00000256280	chromatin interactions
ENSG00000176340	chromatin interactions
ENSG00000072518	chromatin interactions
ENSG00000256100	chromatin interactions
ENSG00000202089	chromatin interactions
ENSG00000168005	chromatin interactions
ENSG00000188070	chromatin interactions
PSIP1	miRNA target sites

Extended variants
information (count: 135 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:135 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs112625007	chr11:63534569-63534570	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
2	rs367555014	chr11:63534571-63534572	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
3	rs556589235	chr11:63534588-63534589	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
4	rs61928237	chr11:63534596-63534597	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs539160500	chr11:63534598-63534599	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs552861902	chr11:63534657-63534658	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs540006394	chr11:63534659-63534660	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs541805123	chr11:63534679-63534680	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs111714159	chr11:63534741-63534742	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
10	rs558375911	chr11:63534771-63534772	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
11	rs186711937	chr11:63534800-63534801	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs562005503	chr11:63534816-63534817	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
13	rs575655317	chr11:63534890-63534891	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
14	rs75184779	chr11:63534933-63534934	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
15	rs563682294	chr11:63534951-63534952	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
16	rs374466132	chr11:63534964-63534965	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	Overlapped CNVs	n/a
17	rs35378336	chr11:63535088-63535089	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs77190267	chr11:63535107-63535108	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs552660980	chr11:63535115-63535116	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs190613753	chr11:63535124-63535125	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs528670841	chr11:63535145-63535146	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs112531363	chr11:63535148-63535149	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs560648208	chr11:63535150-63535151	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs114366680	chr11:63535159-63535160	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs568413682	chr11:63535161-63535162	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs537354333	chr11:63535201-63535202	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs550123039	chr11:63535206-63535207	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs532713248	chr11:63535220-63535221	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs143397717	chr11:63535233-63535234	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs539088194	chr11:63535240-63535241	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs546097625	chr11:63535267-63535268	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs199656025	chr11:63535282-63535283	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs562962809	chr11:63535306-63535307	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs553014571	chr11:63535357-63535358	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs572892533	chr11:63535380-63535381	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs535633473	chr11:63535384-63535385	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs555274747	chr11:63535403-63535404	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs575569277	chr11:63535412-63535413	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs544534341	chr11:63535462-63535463	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs368146735	chr11:63535488-63535489	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
41	rs563645711	chr11:63535526-63535527	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs146715282	chr11:63535551-63535552	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
43	rs531713597	chr11:63535573-63535574	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs548172060	chr11:63535658-63535659	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs35177480	chr11:63535680-63535681	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
46	rs545913096	chr11:63535709-63535710	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
47	rs140628142	chr11:63535721-63535722	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs528627190	chr11:63535779-63535780	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs548719549	chr11:63536114-63536115	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
50	rs561957810	chr11:63536134-63536135	Active TSS Weak transcription Bivalent/Poised TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	21785460	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Prostate cancer	18779856	CNVD
Cancer	17160897	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:655 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63509000-63534800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr11:63511000-63534800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
3	chr11:63516000-63534800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
4	chr11:63519400-63534800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr11:63521200-63534600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
6	chr11:63521400-63534400	Weak transcription	Primary B cells from cord blood	blood
7	chr11:63521400-63534800	Weak transcription	Primary T helper cells fromperipheralblood	blood
8	chr11:63525000-63534400	Weak transcription	HSMMtube	muscle
9	chr11:63525800-63534600	Weak transcription	Primary T helper cells PMA-I stimulated	--
10	chr11:63526200-63534600	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr11:63526600-63534800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr11:63526600-63534800	Weak transcription	Small Intestine	intestine
13	chr11:63528400-63534600	Weak transcription	Primary monocytes fromperipheralblood	blood
14	chr11:63528800-63534400	Weak transcription	Monocytes-CD14+_RO01746	blood
15	chr11:63529200-63534400	Enhancers	Fetal Brain Male	brain
16	chr11:63529200-63534400	Weak transcription	K562	blood
17	chr11:63529200-63534600	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr11:63529200-63534800	Weak transcription	Primary T cells from cord blood	blood
19	chr11:63529200-63534800	Enhancers	Fetal Heart	heart
20	chr11:63529400-63534400	Weak transcription	Osteobl	bone
21	chr11:63529400-63534800	Enhancers	Fetal Lung	lung
22	chr11:63529600-63534400	Weak transcription	NHDF-Ad	bronchial
23	chr11:63531200-63534400	Weak transcription	Brain Angular Gyrus	brain
24	chr11:63531200-63534400	Weak transcription	NHEK	skin
25	chr11:63531200-63534800	Weak transcription	Brain Substantia Nigra	brain
26	chr11:63531200-63534800	Weak transcription	Esophagus	oesophagus
27	chr11:63531200-63534800	Weak transcription	Left Ventricle	heart
28	chr11:63531400-63534800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr11:63531400-63535000	Enhancers	Placenta Amnion	Placenta Amnion
30	chr11:63531800-63534400	Genic enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr11:63532200-63534400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr11:63532200-63534600	Enhancers	A549	lung
33	chr11:63532400-63535000	Flanking Active TSS	HepG2	liver
34	chr11:63532600-63534400	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr11:63532600-63534400	Weak transcription	Rectal Smooth Muscle	rectum
36	chr11:63532600-63534400	Enhancers	Stomach Smooth Muscle	stomach
37	chr11:63532600-63534600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr11:63532600-63535000	Weak transcription	Gastric	stomach
39	chr11:63532600-63535200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
40	chr11:63532800-63534600	Enhancers	Duodenum Smooth Muscle	Duodenum
41	chr11:63532800-63534800	Enhancers	ES-I3 Cell Line	embryonic stem cell
42	chr11:63532800-63535000	Enhancers	Pancreas	Pancrea
43	chr11:63532800-63535600	Transcr. at gene 5' and 3'	Fetal Intestine Small	intestine
44	chr11:63533000-63534600	Enhancers	HUES48 Cell Line	embryonic stem cell
45	chr11:63533000-63534600	Enhancers	Brain Hippocampus Middle	brain
46	chr11:63533000-63534600	Enhancers	Brain Inferior Temporal Lobe	brain
47	chr11:63533000-63534600	Transcr. at gene 5' and 3'	Fetal Intestine Large	intestine
48	chr11:63533000-63534800	Enhancers	Rectal Mucosa Donor 31	rectum
49	chr11:63533200-63534400	Enhancers	iPS-18 Cell Line	embryonic stem cell
50	chr11:63533200-63534400	Enhancers	Breast Myoepithelial Primary Cells	Breast

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