Variant report

Variant	esv3324978
Chromosome Location	chr15:74218524-74221272
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:411)
CpG islands
(count:1161)
Chromatin interactive
region (count:6)
LncRNA
region (count:13)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:411 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr15:74219976-74220340	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr15:74218554-74218886	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr15:74219283-74219300	H1-hESC	embryonic stem cell:	n/a	n/a
4	CCNT2	chr15:74219206-74219259	K562	blood:	n/a	n/a
5	CEBPB	chr15:74219122-74219348	IMR90	lung:	n/a	n/a
6	CEBPB	chr15:74219110-74219447	HepG2	liver:	n/a	n/a
7	CEBPB	chr15:74218623-74219073	ECC-1	luminal epithelium:	n/a	n/a
8	CEBPB	chr15:74219145-74219413	HepG2	liver:	n/a	n/a
9	CHD1	chr15:74219589-74219728	H1-hESC	embryonic stem cell:	n/a	n/a
10	CHD1	chr15:74217903-74221545	IMR90	lung:	n/a	n/a
11	CHD2	chr15:74220084-74220505	H1-hESC	embryonic stem cell:	n/a	n/a
12	CREB1	chr15:74219939-74220302	A549	lung:	n/a	n/a
13	CTBP2	chr15:74218578-74219345	H1-hESC	embryonic stem cell:	n/a	n/a
14	CTBP2	chr15:74219961-74220611	H1-hESC	embryonic stem cell:	n/a	n/a
15	CTCF	chr15:74220035-74220470	HepG2	liver:	n/a	chr15:74220350-74220366
16	CTCF	chr15:74220140-74220430	HEK293	kidney:	n/a	chr15:74220350-74220366
17	CTCF	chr15:74220300-74220450	AG04450	lung:	n/a	chr15:74220350-74220366
18	CTCF	chr15:74220220-74220370	GM12864	blood:	n/a	chr15:74220350-74220366
19	CTCF	chr15:74220320-74220470	HCPEpiC	choroid plexus:	n/a	chr15:74220350-74220366
20	CTCF	chr15:74220040-74220190	A549	lung:	n/a	n/a
21	CTCF	chr15:74220049-74220268	GM13977	blood:	n/a	n/a
22	CTCF	chr15:74220660-74220810	AG04450	lung:	n/a	chr15:74220699-74220708
23	CTCF	chr15:74219982-74220413	K562	blood:	n/a	chr15:74220350-74220366
24	CTCF	chr15:74220029-74220500	MCF-7	breast:	n/a	chr15:74220350-74220366
25	CTCF	chr15:74220141-74220403	T-47D	breast:	n/a	chr15:74220350-74220366
26	CTCF	chr15:74220320-74220470	HCFaa	heart:	n/a	chr15:74220350-74220366
27	CTCF	chr15:74220056-74220400	LNCaP	prostate:	n/a	chr15:74220350-74220366
28	CTCF	chr15:74220042-74220486	Fibrobl	skin:	n/a	chr15:74220350-74220366
29	CTCF	chr15:74220320-74220470	HPAF	blood vessel:	n/a	chr15:74220350-74220366
30	CTCF	chr15:74220320-74220470	HPF	lung:	n/a	chr15:74220350-74220366
31	CTCF	chr15:74220080-74220230	GM12870	blood:	n/a	n/a
32	CTCF	chr15:74220280-74220430	HRPEpiC	eye:	n/a	chr15:74220350-74220366
33	CTCF	chr15:74220280-74220430	HCPEpiC	choroid plexus:	n/a	chr15:74220350-74220366
34	CTCF	chr15:74220120-74220270	HL-60	blood:	n/a	n/a
35	CTCF	chr15:74220023-74220501	K562	blood:	n/a	chr15:74220350-74220366
36	CTCF	chr15:74220317-74220390	HepG2	liver:	n/a	chr15:74220350-74220366
37	CTCF	chr15:74220120-74220270	HepG2	liver:	n/a	n/a
38	CTCF	chr15:74220260-74220410	Hela-S3	cervix:	n/a	chr15:74220350-74220366
39	CTCF	chr15:74219965-74220473	T-47D	breast:	n/a	chr15:74220350-74220366
40	CTCF	chr15:74220260-74220410	HCT-116	colon:	n/a	chr15:74220350-74220366
41	CTCF	chr15:74220300-74220450	BE2_C	brain:	n/a	chr15:74220350-74220366
42	CTCF	chr15:74220064-74220407	GM10248	blood:	n/a	chr15:74220350-74220366
43	CTCF	chr15:74220280-74220430	HEEpiC	esophagus:	n/a	chr15:74220350-74220366
44	CTCF	chr15:74219863-74220764	HCT-116	colon:	n/a	chr15:74220699-74220708 chr15:74220350-74220366
45	CTCF	chr15:74220360-74220510	GM12872	blood:	n/a	n/a
46	CTCF	chr15:74220240-74220390	BJ	skin:	n/a	chr15:74220350-74220366
47	CTCF	chr15:74220307-74220469	Kidney_OC	kidney:	n/a	chr15:74220350-74220366
48	CTCF	chr15:74219929-74220680	HCT-116	colon:	n/a	chr15:74220350-74220366
49	CTCF	chr15:74220240-74220390	GM12866	blood:	n/a	chr15:74220350-74220366
50	CTCF	chr15:74219880-74220646	MCF-7	breast:	n/a	chr15:74220350-74220366

(count:1161 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:74219307-74219357	NH-A	brain:	n/a
2	chr15:74220517-74220567	ProgFib	skin:	n/a
3	chr15:74219307-74219357	NH-A	brain:	n/a
4	chr15:74220517-74220567	ProgFib	skin:	n/a
5	chr15:74220255-74220305	AoSMC	blood vessel:	n/a
6	chr15:74218904-74218954	BJ	skin:	n/a
7	chr15:74218733-74218783	GM19239	blood:	n/a
8	chr15:74220517-74220567	SKMC	muscle:	n/a
9	chr15:74218733-74218783	K562	blood:	n/a
10	chr15:74219307-74219357	U87	brain:	n/a
11	chr15:74219948-74219998	H1-hESC	embryonic stem cell:	embryo
12	chr15:74218904-74218954	HNPCEpiC	eye:	n/a
13	chr15:74219669-74219719	ProgFib	skin:	n/a
14	chr15:74219669-74219719	SAEC	small airway:	n/a
15	chr15:74218529-74218579	HNPCEpiC	eye:	n/a
16	chr15:74219645-74219695	NB4	blood:	n/a
17	chr15:74220017-74220067	Caco-2	colon:	n/a
18	chr15:74218767-74218817	IMR90	lung:	fetal
19	chr15:74218767-74218817	CMK	blood:	n/a
20	chr15:74218767-74218817	HCM	heart:	n/a
21	chr15:74220776-74220826	SK-N-SH	brain:	n/a
22	chr15:74218715-74218765	NB4	blood:	n/a
23	chr15:74219669-74219719	NB4	blood:	n/a
24	chr15:74218904-74218954	HCPEpiC	choroid plexus:	n/a
25	chr15:74219645-74219695	GM12878	blood:	n/a
26	chr15:74220255-74220305	HL-60	blood:	n/a
27	chr15:74220259-74220309	HL-60	blood:	n/a
28	chr15:74218715-74218765	SKMC	muscle:	n/a
29	chr15:74218767-74218817	NHDF-neo	bronchial:	n/a
30	chr15:74218767-74218817	T-47D	breast:	n/a
31	chr15:74220517-74220567	HRCEpiC	kidney:	n/a
32	chr15:74219669-74219719	Caco-2	colon:	n/a
33	chr15:74220259-74220309	PrEC	prostate:	n/a
34	chr15:74219307-74219357	HCT-116	colon:	n/a
35	chr15:74218733-74218783	CMK	blood:	n/a
36	chr15:74220017-74220067	NH-A	brain:	n/a
37	chr15:74219669-74219719	HEK293	kidney:	embryo
38	chr15:74218529-74218579	K562	blood:	n/a
39	chr15:74218529-74218579	HL-60	blood:	n/a
40	chr15:74218780-74218830	NT2-D1	testis:	n/a
41	chr15:74218733-74218783	Hela-S3	cervix:	n/a
42	chr15:74218715-74218765	HNPCEpiC	eye:	n/a
43	chr15:74218715-74218765	ProgFib	skin:	n/a
44	chr15:74218921-74218971	AG09309	skin:	n/a
45	chr15:74218921-74218971	AG10803	skin:	n/a
46	chr15:74218921-74218971	ProgFib	skin:	n/a
47	chr15:74219645-74219695	HL-60	blood:	n/a
48	chr15:74218697-74218747	AG09319	gingival:	n/a
49	chr15:74220295-74220345	MCF-7	breast:	n/a
50	chr15:74218733-74218783	Caco-2	colon:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:74163735..74170089-chr15:74218002..74222715,6	MCF-7	breast:
2	chr15:74220838..74222691-chr15:74242303..74245094,2	MCF-7	breast:
3	chr15:74190385..74192621-chr15:74220750..74222967,2	MCF-7	breast:
4	chr15:74217306..74220336-chr15:74236509..74239961,4	MCF-7	breast:
5	chr15:72523731..72525453-chr15:74219224..74220936,2	MCF-7	breast:
6	chr15:73976691..73979215-chr15:74216849..74218653,2	MCF-7	breast:

(count:13 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-STOML1-1	chr15:74220406-74220589	NONHSAT047180
2	lnc-STOML1-1	chr15:74218581-74218683	ENSG00000261801.1
3	lnc-STOML1-1	chr15:74219995-74220127	NONHSAT047182
4	lnc-STOML1-1	chr15:74218581-74218639	ENSG00000261801.1
5	lnc-STOML1-1	chr15:74218581-74218672	ENSG00000261801.1
6	lnc-STOML1-1	chr15:74220406-74220589	NONHSAT047179
7	lnc-STOML1-1	chr15:74219995-74220036	ENSG00000261801.1
8	lnc-STOML1-1	chr15:74220406-74220544	ENSG00000261801.1
9	lnc-STOML1-1	chr15:74219995-74220036	ENSG00000261801.1
10	lnc-STOML1-1	chr15:74219995-74220127	NONHSAT047178
11	lnc-STOML1-1	chr15:74219995-74220127	ENSG00000244984
12	lnc-STOML1-1	chr15:74220406-74220589	ENSG00000244984
13	lnc-STOML1-1	chr15:74215217-74218788	NONHSAT047190

No data

Variant related genes	Relation type
LOXL1	TF binding region
LOXL1-AS1	TF binding region
LOXL1	CpG island
LOXL1-AS1	CpG island
ENSG00000129038	chromatin interactions
ENSG00000067225	chromatin interactions
ENSG00000167139	chromatin interactions
ENSG00000103855	chromatin interactions
ENSG00000260624	chromatin interactions
PANX1	miRNA target sites
ANO6	miRNA target sites

Extended variants
information (count: 104 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:104 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs531819569	chr15:74218525-74218526	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
2	rs542642696	chr15:74218529-74218530	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
3	rs570369624	chr15:74218620-74218621	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
4	rs534640733	chr15:74218624-74218625	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
5	rs552930324	chr15:74218642-74218643	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
6	rs79899706	chr15:74218653-74218654	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	Overlapped CNVs	n/a
7	rs574375807	chr15:74218671-74218672	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
8	rs369568365	chr15:74218712-74218713	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
9	rs541894579	chr15:74218742-74218743	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
10	rs149302857	chr15:74218744-74218745	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
11	rs575433516	chr15:74218765-74218766	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
12	rs546372498	chr15:74218773-74218774	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
13	rs564681268	chr15:74218780-74218781	Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	Overlapped CNVs	n/a
14	rs528787915	chr15:74218807-74218808	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs540618668	chr15:74218830-74218831	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs562093042	chr15:74218874-74218875	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs529236362	chr15:74218896-74218897	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs550972788	chr15:74218949-74218950	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs561304085	chr15:74218977-74218978	Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs75630278	chr15:74219017-74219018	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs533257322	chr15:74219027-74219028	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs144581728	chr15:74219052-74219053	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs111575289	chr15:74219072-74219073	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs115031006	chr15:74219075-74219076	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs377486747	chr15:74219107-74219108	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs193092387	chr15:74219116-74219117	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs535078529	chr15:74219208-74219209	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs556999748	chr15:74219217-74219218	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs370368960	chr15:74219227-74219228	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs148248187	chr15:74219277-74219278	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs199674562	chr15:74219279-74219280	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs545964567	chr15:74219291-74219292	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs368210432	chr15:74219308-74219309	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs568267928	chr15:74219346-74219347	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs372318716	chr15:74219373-74219374	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs573507169	chr15:74219455-74219456	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs540908534	chr15:74219466-74219467	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs201884374	chr15:74219482-74219483	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs1048661	chr15:74219546-74219547	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs140374183	chr15:74219556-74219557	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
41	rs368501200	chr15:74219564-74219565	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs3825942	chr15:74219582-74219583	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	disease
43	rs371771169	chr15:74219596-74219597	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs78803776	chr15:74219599-74219600	Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs138183635	chr15:74219602-74219603	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
46	rs145943705	chr15:74219606-74219607	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
47	rs567703890	chr15:74219607-74219608	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
48	rs138426608	chr15:74219621-74219622	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
49	rs528240156	chr15:74219627-74219628	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
50	rs376477337	chr15:74219651-74219652	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Prostate cancer	16573809	CNVD
Autism	17322880	CNVD
phobic disorder	16773131	CNVD
Autism	21480499	CNVD
Disorders of sex development	22290220	CNVD
Mental retardation	19951919	CNVD
Mental retardation	16773131	CNVD
T-cell lymphomas	19863542	CNVD
15q24 microdeletion syndrome	22180641	CNVD
15q24 microdeletion syndrome	19921647	CNVD
Disease	22216833	CNVD
Mental retardation	17360722	CNVD
15q24 microdeletion syndrome	22216833	CNVD
15q24 microdeletion syndrome	22283845	CNVD
Developmental delay	17932688	CNVD
craniofacial dysmorphism	17932688	CNVD
digital and genital abnormalities	17932688	CNVD
Breast cancer	21364760	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Bipolar disorder	19114987	CNVD
Cancer	20164919	CNVD

Chromatin state (count:560 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74212200-74218600	Enhancers	Fetal Heart	heart
2	chr15:74213600-74218800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr15:74213600-74218800	Enhancers	Left Ventricle	heart
4	chr15:74213600-74218800	Enhancers	Right Ventricle	heart
5	chr15:74213600-74219000	Enhancers	Stomach Mucosa	stomach
6	chr15:74213800-74218800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
7	chr15:74214000-74218600	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr15:74214000-74218800	Enhancers	Ovary	ovary
9	chr15:74214200-74218800	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr15:74214400-74218800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr15:74214600-74218600	Flanking Active TSS	HSMM	muscle
12	chr15:74214600-74218800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr15:74214800-74218800	Weak transcription	Brain Angular Gyrus	brain
14	chr15:74214800-74219200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
15	chr15:74215200-74218800	Enhancers	Primary hematopoietic stem cells short term culture	blood
16	chr15:74215400-74219400	Enhancers	Primary T cells fromperipheralblood	blood
17	chr15:74215600-74219000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
18	chr15:74215600-74219000	Enhancers	Primary T helper cells PMA-I stimulated	--
19	chr15:74215600-74219000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
20	chr15:74215800-74218800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr15:74215800-74218800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
22	chr15:74215800-74218800	Enhancers	Placenta	Placenta
23	chr15:74215800-74219400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
24	chr15:74216000-74219000	Enhancers	Primary T helper cells fromperipheralblood	blood
25	chr15:74216000-74219400	Enhancers	Primary T helper naive cells from peripheral blood	blood
26	chr15:74216000-74219400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr15:74216400-74218600	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr15:74216400-74218600	Flanking Active TSS	NHLF	lung
29	chr15:74216800-74218600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr15:74216800-74218800	Weak transcription	Fetal Kidney	kidney
31	chr15:74216800-74220800	Flanking Active TSS	Stomach Smooth Muscle	stomach
32	chr15:74217000-74218800	Bivalent Enhancer	Fetal Thymus	thymus
33	chr15:74217200-74218800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr15:74217200-74218800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr15:74217200-74218800	Weak transcription	Right Atrium	heart
36	chr15:74217200-74219600	Weak transcription	A549	lung
37	chr15:74217400-74218800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
38	chr15:74217400-74219200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
39	chr15:74217600-74219200	Weak transcription	Primary T cells from cord blood	blood
40	chr15:74217800-74218600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr15:74217800-74218600	Flanking Active TSS	NHDF-Ad	bronchial
42	chr15:74217800-74219000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
43	chr15:74217800-74219200	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr15:74217800-74220400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr15:74218000-74218600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr15:74218000-74218600	Weak transcription	Brain Hippocampus Middle	brain
47	chr15:74218000-74218600	Bivalent Enhancer	Fetal Intestine Small	intestine
48	chr15:74218000-74218600	Flanking Active TSS	HSMMtube	muscle
49	chr15:74218000-74218600	Flanking Active TSS	Osteobl	bone
50	chr15:74218000-74218800	Weak transcription	Brain Inferior Temporal Lobe	brain

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