Variant report

Variant esv3326078
Chromosome Location chr5:41710992-41743453
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:380 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:41718200-41718400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr5:41718400-41718800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr5:41721000-41722000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr5:41721200-41722200 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr5:41721800-41722000 Enhancers HSMMtube muscle
6 chr5:41722000-41736800 Weak transcription HSMMtube muscle
7 chr5:41722600-41722800 Enhancers Right Atrium heart
8 chr5:41722600-41723000 Enhancers Fetal Muscle Leg muscle
9 chr5:41722600-41723000 Enhancers Ovary ovary
10 chr5:41722800-41723000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr5:41722800-41723000 ZNF genes & repeats Aorta Aorta
12 chr5:41722800-41723000 Enhancers GM12878-XiMat blood
13 chr5:41723000-41724800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr5:41723000-41735800 Weak transcription GM12878-XiMat blood
15 chr5:41723000-41739200 Weak transcription Aorta Aorta
16 chr5:41725200-41725400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr5:41725200-41725400 Enhancers Right Ventricle heart
18 chr5:41725400-41725600 Enhancers Fetal Kidney kidney
19 chr5:41725400-41728400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:41725400-41739200 Weak transcription Right Ventricle heart
21 chr5:41725600-41747400 Weak transcription Fetal Kidney kidney
22 chr5:41726000-41726600 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr5:41726600-41736000 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr5:41726600-41736000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr5:41726800-41728400 Weak transcription Primary T cells from cord blood blood
26 chr5:41727000-41730600 Weak transcription Left Ventricle heart
27 chr5:41727200-41727400 Enhancers Fetal Brain Female brain
28 chr5:41727200-41728800 Weak transcription Fetal Thymus thymus
29 chr5:41727200-41730600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr5:41727200-41735200 Weak transcription Stomach Smooth Muscle stomach
31 chr5:41727200-41735800 Weak transcription Lung lung
32 chr5:41727200-41738400 Weak transcription Thymus Thymus
33 chr5:41727400-41729000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr5:41727400-41729000 Weak transcription Dnd41 blood
35 chr5:41727400-41730400 Weak transcription Primary T cells fromperipheralblood blood
36 chr5:41727400-41730400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr5:41727400-41735400 Weak transcription Hela-S3 cervix
38 chr5:41727400-41751400 Weak transcription Fetal Brain Female brain
39 chr5:41727600-41730400 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr5:41727600-41735400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr5:41727600-41735400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr5:41727600-41738400 Weak transcription Gastric stomach
43 chr5:41727600-41738400 Weak transcription Rectal Smooth Muscle rectum
44 chr5:41727800-41738400 Weak transcription Brain Inferior Temporal Lobe brain
45 chr5:41727800-41747200 Weak transcription NH-A brain
46 chr5:41727800-41758200 Weak transcription Esophagus oesophagus
47 chr5:41728000-41739200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr5:41728200-41728600 Weak transcription Primary B cells from cord blood blood
49 chr5:41728200-41738400 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr5:41728400-41729000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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