No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs553162910 |
chr9:140483977-140483978 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs150890156 |
chr9:140483982-140483983 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs573065792 |
chr9:140484035-140484036 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs538784711 |
chr9:140484046-140484047 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs370573611 |
chr9:140484061-140484062 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs114222989 |
chr9:140484065-140484066 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs575565909 |
chr9:140484100-140484101 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs544568348 |
chr9:140484114-140484115 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs115062061 |
chr9:140484133-140484134 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs574754159 |
chr9:140484195-140484196 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs540517923 |
chr9:140484234-140484235 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs191714020 |
chr9:140484255-140484256 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs145142141 |
chr9:140484256-140484257 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs532721401 |
chr9:140484339-140484340 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs551224772 |
chr9:140484374-140484375 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs564961087 |
chr9:140484401-140484402 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs530446752 |
chr9:140484421-140484422 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs550549762 |
chr9:140484436-140484437 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs567577151 |
chr9:140484440-140484441 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs565073797 |
chr9:140484459-140484460 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs536591259 |
chr9:140484494-140484495 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs2353078 |
chr9:140484517-140484518 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
23 |
rs12344960 |
chr9:140484530-140484531 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs564579895 |
chr9:140484597-140484598 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs140320057 |
chr9:140484641-140484642 |
Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
26 |
rs538792196 |
chr9:140484649-140484650 |
Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs558804846 |
chr9:140484785-140484786 |
Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs183541102 |
chr9:140484825-140484826 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs537859239 |
chr9:140484826-140484827 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs554582475 |
chr9:140484841-140484842 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs574486640 |
chr9:140484966-140484967 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs540550377 |
chr9:140485038-140485039 |
Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs554030867 |
chr9:140485044-140485045 |
Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs149675488 |
chr9:140485116-140485117 |
Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs546352807 |
chr9:140485172-140485173 |
Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs564834290 |
chr9:140485208-140485209 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs530587809 |
chr9:140485211-140485212 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs550845800 |
chr9:140485233-140485234 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs187099792 |
chr9:140485306-140485307 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs112490360 |
chr9:140485317-140485318 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs529698775 |
chr9:140485324-140485325 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs12685070 |
chr9:140485341-140485342 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs546931856 |
chr9:140485344-140485345 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs566729838 |
chr9:140485359-140485360 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs564485747 |
chr9:140485373-140485374 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs112420688 |
chr9:140485437-140485438 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs112591423 |
chr9:140485499-140485500 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs560889174 |
chr9:140485502-140485503 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs532208170 |
chr9:140485509-140485510 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs552307445 |
chr9:140485510-140485511 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|