Variant report

Variant rs12344960
Chromosome Location chr9:140484530-140484531
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140483600-140484600 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
2 chr9:140483600-140485600 Active TSS HUES64 Cell Line embryonic stem cell
3 chr9:140483600-140486200 Active TSS A549 lung
4 chr9:140483600-140486400 Active TSS H9 Cell Line embryonic stem cell
5 chr9:140483600-140486400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr9:140483800-140484600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr9:140483800-140484600 Flanking Active TSS Adipose Nuclei Adipose
8 chr9:140483800-140484600 Flanking Active TSS Colonic Mucosa Colon
9 chr9:140483800-140484600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
10 chr9:140483800-140484800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr9:140483800-140485800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr9:140483800-140486000 Active TSS ES-I3 Cell Line embryonic stem cell
13 chr9:140483800-140486200 Active TSS HUES6 Cell Line embryonic stem cell
14 chr9:140484000-140484600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
15 chr9:140484000-140484800 Flanking Active TSS Primary hematopoietic stem cells blood
16 chr9:140484000-140485600 Active TSS iPS-20b Cell Line embryonic stem cell
17 chr9:140484000-140485600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr9:140484000-140485600 Active TSS Muscle Satellite Cultured Cells --
19 chr9:140484000-140485600 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr9:140484000-140485600 Active TSS Colon Smooth Muscle Colon
21 chr9:140484000-140485600 Active TSS Small Intestine intestine
22 chr9:140484000-140485600 Active TSS HMEC breast
23 chr9:140484000-140485800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr9:140484000-140485800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr9:140484000-140485800 Active TSS Pancreatic Islets Pancreatic Islet
26 chr9:140484000-140485800 Active TSS HepG2 liver
27 chr9:140484000-140485800 Active TSS NHDF-Ad bronchial
28 chr9:140484000-140485800 Active TSS NHEK skin
29 chr9:140484000-140486200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr9:140484000-140486200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr9:140484000-140486200 Active TSS HUES48 Cell Line embryonic stem cell
32 chr9:140484200-140485000 Active TSS Right Atrium heart
33 chr9:140484200-140485200 Active TSS Brain Germinal Matrix brain
34 chr9:140484200-140485200 Weak transcription Stomach Mucosa stomach
35 chr9:140484200-140485400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr9:140484200-140485400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
37 chr9:140484200-140485400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
38 chr9:140484200-140485400 Active TSS Primary T cells from cord blood blood
39 chr9:140484200-140485400 Active TSS Primary T helper cells PMA-I stimulated --
40 chr9:140484200-140485400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
41 chr9:140484200-140485400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
42 chr9:140484200-140485400 Active TSS Brain Cingulate Gyrus brain
43 chr9:140484200-140485400 Active TSS Dnd41 blood
44 chr9:140484200-140485400 Active TSS HSMMtube muscle
45 chr9:140484200-140485600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
46 chr9:140484200-140485600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr9:140484200-140485600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr9:140484200-140485600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
49 chr9:140484200-140485600 Active TSS Brain Angular Gyrus brain
50 chr9:140484200-140485600 Active TSS Brain Hippocampus Middle brain

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