Variant report

Variant	nsv894667
Chromosome Location	chr9:140473729-140518576
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3452)
CpG islands
(count:1893)
Chromatin interactive
region (count:144)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3452 , 50 per page) page: 1 2 3 4 5 6 7 ... 70

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:140514701-140514718	K562	blood:	n/a	n/a
2	ARID3A	chr9:140473271-140473827	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:140512995-140513194	K562	blood:	n/a	n/a
4	ARID3A	chr9:140476767-140476847	K562	blood:	n/a	n/a
5	ARID3A	chr9:140476704-140476869	HepG2	liver:	n/a	n/a
6	ATF1	chr9:140485031-140485339	K562	blood:	n/a	n/a
7	ATF1	chr9:140512908-140513272	K562	blood:	n/a	n/a
8	ATF2	chr9:140512882-140513291	GM12878	blood:	n/a	n/a
9	ATF2	chr9:140512846-140513342	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr9:140512599-140513361	GM12878	blood:	n/a	n/a
11	ATF2	chr9:140513019-140513356	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF3	chr9:140499555-140499816	K562	blood:	n/a	chr9:140499631-140499640
13	ATF3	chr9:140513192-140513485	HepG2	liver:	n/a	chr9:140513400-140513409
14	ATF3	chr9:140500314-140500576	K562	blood:	n/a	n/a
15	ATF3	chr9:140506272-140506563	K562	blood:	n/a	n/a
16	ATF3	chr9:140512941-140513477	K562	blood:	n/a	chr9:140513400-140513409
17	ATF3	chr9:140513089-140513438	A549	lung:	n/a	chr9:140513400-140513409
18	ATF3	chr9:140512666-140513485	A549	lung:	n/a	chr9:140513400-140513409
19	ATF3	chr9:140513263-140513470	GM12878	blood:	n/a	chr9:140513400-140513409
20	ATF3	chr9:140513171-140513459	H1-hESC	embryonic stem cell:	n/a	chr9:140513400-140513409
21	ATF3	chr9:140506242-140506580	K562	blood:	n/a	n/a
22	ATF3	chr9:140513079-140513492	K562	blood:	n/a	chr9:140513400-140513409
23	BACH1	chr9:140512354-140512455	K562	blood:	n/a	n/a
24	BACH1	chr9:140485179-140485711	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr9:140506296-140506570	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr9:140474840-140475003	K562	blood:	n/a	n/a
27	BCL3	chr9:140506032-140508286	A549	lung:	n/a	n/a
28	BCL3	chr9:140505934-140508793	A549	lung:	n/a	n/a
29	BCL3	chr9:140512432-140513462	GM12878	blood:	n/a	n/a
30	BCL3	chr9:140472964-140473771	A549	lung:	n/a	chr9:140473056-140473069
31	BCL3	chr9:140473114-140473744	A549	lung:	n/a	n/a
32	BCL3	chr9:140512082-140513429	A549	lung:	n/a	n/a
33	BCL3	chr9:140512554-140513408	A549	lung:	n/a	n/a
34	BCLAF1	chr9:140473000-140473748	GM12878	blood:	n/a	chr9:140473056-140473069
35	BCLAF1	chr9:140512590-140513424	GM12878	blood:	n/a	n/a
36	BHLHE40	chr9:140513901-140514002	GM12878	blood:	n/a	n/a
37	BHLHE40	chr9:140500196-140500599	K562	blood:	n/a	chr9:140500319-140500335
38	BHLHE40	chr9:140506203-140506789	K562	blood:	n/a	n/a
39	BHLHE40	chr9:140512971-140513406	K562	blood:	n/a	n/a
40	BHLHE40	chr9:140512827-140513435	GM12878	blood:	n/a	n/a
41	BHLHE40	chr9:140499561-140499836	K562	blood:	n/a	n/a
42	BHLHE40	chr9:140513027-140513435	HepG2	liver:	n/a	n/a
43	BHLHE40	chr9:140499598-140499770	GM12878	blood:	n/a	n/a
44	BHLHE40	chr9:140506261-140506575	A549	lung:	n/a	n/a
45	BHLHE40	chr9:140484981-140485173	GM12878	blood:	n/a	chr9:140484994-140485010
46	BHLHE40	chr9:140501892-140502243	HepG2	liver:	n/a	n/a
47	BHLHE40	chr9:140484293-140484320	K562	blood:	n/a	n/a
48	BHLHE40	chr9:140500257-140500479	GM12878	blood:	n/a	chr9:140500319-140500335
49	BHLHE40	chr9:140499614-140499783	HepG2	liver:	n/a	n/a
50	BHLHE40	chr9:140506344-140506505	GM12878	blood:	n/a	n/a

(count:1893 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140514016-140514066	ovcar-3	ovarian:	n/a
2	chr9:140499132-140499182	ECC-1	luminal epithelium:	n/a
3	chr9:140514016-140514066	ovcar-3	ovarian:	n/a
4	chr9:140499132-140499182	ECC-1	luminal epithelium:	n/a
5	chr9:140513113-140513163	HRE	kidney:	n/a
6	chr9:140484220-140484270	Jurkat	blood:	n/a
7	chr9:140473704-140473754	Jurkat	blood:	n/a
8	chr9:140485596-140485646	CMK	blood:	n/a
9	chr9:140513113-140513163	NT2-D1	testis:	n/a
10	chr9:140514016-140514066	HepG2	liver:	n/a
11	chr9:140512455-140512505	HMEC	breast:	n/a
12	chr9:140485596-140485646	HUVEC	blood vessel:	n/a
13	chr9:140499623-140499673	ProgFib	skin:	n/a
14	chr9:140476961-140477011	NHBE	bronchial:	n/a
15	chr9:140502926-140502976	NHBE	bronchial:	n/a
16	chr9:140485596-140485646	AG09319	gingival:	n/a
17	chr9:140476961-140477011	ovcar-3	ovarian:	n/a
18	chr9:140483477-140483527	NHDF-neo	bronchial:	n/a
19	chr9:140512513-140512563	Jurkat	blood:	n/a
20	chr9:140500208-140500258	IMR90	lung:	fetal
21	chr9:140510480-140510530	NHBE	bronchial:	n/a
22	chr9:140512513-140512563	AG09309	skin:	n/a
23	chr9:140500813-140500863	T-47D	breast:	n/a
24	chr9:140502926-140502976	AG09309	skin:	n/a
25	chr9:140487898-140487948	Hela-S3	cervix:	n/a
26	chr9:140499623-140499673	HRE	kidney:	n/a
27	chr9:140481498-140481548	GM06990	blood:	n/a
28	chr9:140477134-140477184	HRCEpiC	kidney:	n/a
29	chr9:140512455-140512505	SK-N-MC	brain:	n/a
30	chr9:140481498-140481548	PANC-1	pancreas:	n/a
31	chr9:140512455-140512505	SK-N-SH_RA	brain:	n/a
32	chr9:140501305-140501355	MCF-7	breast:	n/a
33	chr9:140500208-140500258	H1-hESC	embryonic stem cell:	embryo
34	chr9:140473875-140473925	Caco-2	colon:	n/a
35	chr9:140484977-140485027	AG09319	gingival:	n/a
36	chr9:140499623-140499673	HCF	heart:	n/a
37	chr9:140499623-140499673	Jurkat	blood:	n/a
38	chr9:140512455-140512505	RPTEC	kidney:	n/a
39	chr9:140473680-140473730	HPAEpiC	pulmonary alveolar:	n/a
40	chr9:140500680-140500730	GM06990	blood:	n/a
41	chr9:140500037-140500087	U87	brain:	n/a
42	chr9:140513113-140513163	HRCEpiC	kidney:	n/a
43	chr9:140500208-140500258	HRPEpiC	eye:	n/a
44	chr9:140514016-140514066	GM19239	blood:	n/a
45	chr9:140481498-140481548	BJ	skin:	n/a
46	chr9:140500813-140500863	H1-hESC	embryonic stem cell:	embryo
47	chr9:140500037-140500087	GM12878	blood:	n/a
48	chr9:140514016-140514066	HCF	heart:	n/a
49	chr9:140483477-140483527	MCF-7	breast:	n/a
50	chr9:140500680-140500730	Hepatocyte	liver:	n/a

(count:144 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:140477211..140479524-chr9:140496943..140498868,3	K562	blood:
2	chr9:140473487..140475608-chr9:140520167..140523048,2	K562	blood:
3	chr11:61559954..61560588-chr9:140506302..140506842,2	Hela-S3	cervix:
4	chr9:140487600..140490866-chr9:140491246..140493751,4	MCF-7	breast:
5	chr9:140472065..140474628-chr9:140492745..140495141,2	MCF-7	breast:
6	chr9:140510301..140512347-chr9:140541289..140543188,2	MCF-7	breast:
7	chr9:140482616..140489091-chr9:140495925..140503345,17	MCF-7	breast:
8	chr9:140487223..140489967-chr9:140490391..140493317,2	K562	blood:
9	chr9:140491452..140494377-chr9:140498511..140500095,2	K562	blood:
10	chr9:140482066..140484246-chr9:140508462..140511181,2	K562	blood:
11	chr17:8059167..8059999-chr9:140506144..140506746,2	Hela-S3	cervix:
12	chr9:140487259..140491195-chr9:140511184..140515704,4	K562	blood:
13	chr9:140431100..140433802-chr9:140474645..140476543,2	K562	blood:
14	chr9:140513748..140516192-chr9:140572995..140575836,2	MCF-7	breast:
15	chr9:140481624..140488545-chr9:140511605..140516057,16	MCF-7	breast:
16	chr9:140512840..140515056-chr9:140515180..140517797,2	K562	blood:
17	chr5:108745145..108746117-chr9:140500319..140500843,2	Hela-S3	cervix:
18	chr14:67826020..67826820-chr9:140484636..140485558,2	Hela-S3	cervix:
19	chr16:30537615..30538179-chr9:140506214..140507038,2	Hela-S3	cervix:
20	chr9:140481402..140486615-chr9:140511490..140514947,5	K562	blood:
21	chr9:140492027..140494879-chr9:140495137..140497726,4	K562	blood:
22	chr9:140482416..140489757-chr9:140495738..140502746,21	K562	blood:
23	chr14:96967956..96969589-chr9:140512244..140513858,2	MCF-7	breast:
24	chr9:140469278..140479132-chr9:140503165..140510984,27	MCF-7	breast:
25	chr9:140482103..140484736-chr9:140493235..140494793,2	MCF-7	breast:
26	chr17:80817947..80820292-chr9:140513382..140515787,2	MCF-7	breast:
27	chr9:140473638..140477283-chr9:140490504..140494912,4	K562	blood:
28	chr9:140135182..140137272-chr9:140472466..140474673,2	K562	blood:
29	chr9:140444420..140448721-chr9:140471876..140474832,3	K562	blood:
30	chr9:140483300..140485633-chr9:140485903..140489005,3	MCF-7	breast:
31	chr9:140477211..140479524-chr9:140496943..140498868,3	K562	blood:
32	chr9:140473450..140475457-chr9:140537565..140540083,2	K562	blood:
33	chr9:140481390..140486340-chr9:140509681..140515296,7	K562	blood:
34	chr9:140481390..140486340-chr9:140509681..140515296,7	K562	blood:
35	chr9:140439204..140441132-chr9:140473629..140475589,2	MCF-7	breast:
36	chr9:140447049..140448753-chr9:140497892..140500070,2	K562	blood:
37	chr9:140443433..140448155-chr9:140497818..140502870,8	MCF-7	breast:
38	chr9:140515440..140517099-chr9:140525922..140527990,2	K562	blood:
39	chr9:140138222..140140007-chr9:140479470..140482098,2	K562	blood:
40	chr15:80213455..80216232-chr9:140505941..140507985,2	MCF-7	breast:
41	chr9:140475531..140477283-chr9:140490504..140492982,2	K562	blood:
42	chr9:140485611..140487134-chr9:140558504..140560713,2	MCF-7	breast:
43	chr9:140512988..140515143-chr9:140515432..140518984,3	K562	blood:
44	chr9:140412905..140414820-chr9:140475554..140478292,2	K562	blood:
45	chr9:140470139..140471923-chr9:140487419..140488929,2	MCF-7	breast:
46	chr9:140444528..140447263-chr9:140504669..140508200,5	MCF-7	breast:
47	chr9:140473167..140475529-chr9:140487290..140489947,2	MCF-7	breast:
48	chr9:140470600..140473358-chr9:140498484..140501413,2	K562	blood:
49	chr22:30238285..30239003-chr9:140485780..140486690,2	MCF-7	breast:
50	chr9:140470766..140479486-chr9:140497266..140502997,13	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARRDC1-1	chr9:140477241-140479475	NONHSAT135743

No data

Variant related genes	Relation type
ZMYND19	TF binding region
ARRDC1	TF binding region
EHMT1	TF binding region
C9orf37	TF binding region
DPH7	TF binding region
ZMYND19	CpG island
ARRDC1	CpG island
EHMT1	CpG island
C9orf37	CpG island
DPH7	CpG island
ENSG00000207601	chromatin interactions
ENSG00000263933	chromatin interactions
ENSG00000198113	chromatin interactions
ENSG00000260806	chromatin interactions
ENSG00000165724	chromatin interactions
ENSG00000258938	chromatin interactions
ENSG00000100916	chromatin interactions
ENSG00000268996	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000134001	chromatin interactions
ENSG00000169957	chromatin interactions
ENSG00000177239	chromatin interactions
ENSG00000244968	chromatin interactions
ENSG00000198961	chromatin interactions
ENSG00000148399	chromatin interactions
ENSG00000167716	chromatin interactions
ENSG00000090060	chromatin interactions
ENSG00000133858	chromatin interactions
ENSG00000168209	chromatin interactions
ENSG00000134824	chromatin interactions
ENSG00000006125	chromatin interactions
ENSG00000100554	chromatin interactions
ENSG00000130653	chromatin interactions
ENSG00000113594	chromatin interactions
ENSG00000141556	chromatin interactions
ENSG00000188229	chromatin interactions
ENSG00000168496	chromatin interactions
ENSG00000173653	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000181090	chromatin interactions
ENSG00000239705	chromatin interactions
ENSG00000179094	chromatin interactions
ENSG00000258498	chromatin interactions
ENSG00000197070	chromatin interactions
ENSG00000197191	chromatin interactions
ENSG00000165802	chromatin interactions
ENSG00000203987	chromatin interactions
ENSG00000182154	chromatin interactions
ENSG00000180953	chromatin interactions
ENSG00000144580	chromatin interactions
ENSG00000245080	chromatin interactions
ENSG00000044574	chromatin interactions
ENSG00000259332	chromatin interactions
ENSG00000259642	chromatin interactions
ENSG00000257028	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000203993	chromatin interactions

Extended variants
information (count: 1987 )
Associated
traits (count: 20 )

Variant overlapped rSNPs/rCNVs (count:1987 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4962243	chr9:140473729-140473730	Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
2	rs184770699	chr9:140473733-140473734	Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
3	rs538616560	chr9:140473752-140473753	Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
4	rs535935652	chr9:140473757-140473758	Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
5	rs558929747	chr9:140473764-140473765	Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
6	rs7044756	chr9:140473920-140473921	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
7	rs555631467	chr9:140473921-140473922	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
8	rs538061723	chr9:140473928-140473929	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
9	rs554422709	chr9:140473936-140473937	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
10	rs34136878	chr9:140473994-140473995	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
11	rs374907865	chr9:140474000-140474001	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
12	rs574883328	chr9:140474002-140474003	Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
13	rs532772516	chr9:140474081-140474082	Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
14	rs540410496	chr9:140474105-140474106	Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
15	rs554233720	chr9:140474106-140474107	Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
16	rs10116052	chr9:140474114-140474115	Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs142114429	chr9:140474171-140474172	Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
18	rs368398810	chr9:140474194-140474195	Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
19	rs576298825	chr9:140474216-140474217	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
20	rs563238551	chr9:140474217-140474218	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
21	rs531923641	chr9:140474220-140474221	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
22	rs548854362	chr9:140474259-140474260	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
23	rs368529233	chr9:140474265-140474266	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
24	rs562087247	chr9:140474313-140474314	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
25	rs563617932	chr9:140474321-140474322	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
26	rs2770817	chr9:140474354-140474355	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs546407433	chr9:140474360-140474361	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
28	rs180922873	chr9:140474366-140474367	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
29	rs527652058	chr9:140474403-140474404	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
30	rs532163440	chr9:140474436-140474437	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
31	rs34872323	chr9:140474437-140474438	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
32	rs375426156	chr9:140474467-140474468	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
33	rs117941367	chr9:140474473-140474474	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
34	rs539666315	chr9:140474477-140474478	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
35	rs112818926	chr9:140474492-140474493	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
36	rs548453291	chr9:140474523-140474524	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
37	rs2257839	chr9:140474526-140474527	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs186340686	chr9:140474528-140474529	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs375881509	chr9:140474537-140474538	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
40	rs189570491	chr9:140474543-140474544	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
41	rs576892667	chr9:140474553-140474554	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
42	rs569790056	chr9:140474554-140474555	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
43	rs539468761	chr9:140474558-140474559	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
44	rs556090902	chr9:140474580-140474581	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
45	rs181545479	chr9:140474606-140474607	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
46	rs542206656	chr9:140474616-140474617	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
47	rs562385079	chr9:140474639-140474640	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
48	rs146940539	chr9:140474655-140474656	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
49	rs112453357	chr9:140474669-140474670	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
50	rs541582668	chr9:140474670-140474671	Weak transcription Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:20)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:3380 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140471800-140474000	Active TSS	H9 Cell Line	embryonic stem cell
2	chr9:140472000-140473800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr9:140472000-140473800	Active TSS	Right Atrium	heart
4	chr9:140472200-140474000	Active TSS	iPS-15b Cell Line	embryonic stem cell
5	chr9:140472200-140474000	Active TSS	iPS-20b Cell Line	embryonic stem cell
6	chr9:140472200-140474200	Active TSS	HepG2	liver
7	chr9:140472400-140473800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr9:140472400-140473800	Active TSS	Breast Myoepithelial Primary Cells	Breast
9	chr9:140472400-140473800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
10	chr9:140472400-140473800	Active TSS	Fetal Intestine Large	intestine
11	chr9:140472400-140473800	Active TSS	Fetal Kidney	kidney
12	chr9:140472400-140474000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
13	chr9:140472400-140474000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr9:140472400-140474000	Active TSS	Pancreatic Islets	Pancreatic Islet
15	chr9:140472400-140474200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr9:140472600-140473800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr9:140472600-140473800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr9:140472600-140473800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr9:140472600-140473800	Active TSS	Primary T cells from cord blood	blood
20	chr9:140472600-140473800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr9:140472600-140473800	Active TSS	Primary T killer memory cells from peripheral blood	blood
22	chr9:140472600-140473800	Active TSS	Aorta	Aorta
23	chr9:140472600-140473800	Active TSS	Brain Anterior Caudate	brain
24	chr9:140472600-140473800	Active TSS	Brain Cingulate Gyrus	brain
25	chr9:140472600-140473800	Active TSS	Colonic Mucosa	Colon
26	chr9:140472600-140473800	Active TSS	Colon Smooth Muscle	Colon
27	chr9:140472600-140473800	Active TSS	Fetal Brain Female	brain
28	chr9:140472600-140473800	Active TSS	Fetal Intestine Small	intestine
29	chr9:140472600-140473800	Active TSS	Fetal Stomach	stomach
30	chr9:140472600-140473800	Active TSS	Gastric	stomach
31	chr9:140472600-140473800	Active TSS	Left Ventricle	heart
32	chr9:140472600-140473800	Active TSS	Lung	lung
33	chr9:140472600-140473800	Active TSS	Psoas Muscle	Psoas
34	chr9:140472600-140473800	Active TSS	Rectal Mucosa Donor 29	rectum
35	chr9:140472600-140473800	Active TSS	Rectal Smooth Muscle	rectum
36	chr9:140472600-140474000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr9:140472600-140474000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr9:140472600-140474000	Active TSS	iPS-18 Cell Line	embryonic stem cell
39	chr9:140472600-140474000	Active TSS	Brain Angular Gyrus	brain
40	chr9:140472600-140474000	Active TSS	Ovary	ovary
41	chr9:140472600-140474000	Active TSS	Thymus	Thymus
42	chr9:140472600-140474000	Active TSS	HSMMtube	muscle
43	chr9:140472600-140474200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr9:140472600-140474400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr9:140472600-140474600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr9:140472800-140473800	Active TSS	Primary hematopoietic stem cells	blood
47	chr9:140472800-140473800	Active TSS	Liver	Liver
48	chr9:140472800-140473800	Active TSS	Brain Germinal Matrix	brain
49	chr9:140472800-140473800	Active TSS	Duodenum Smooth Muscle	Duodenum
50	chr9:140472800-140473800	Active TSS	Fetal Lung	lung

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