Variant report

Variant	rs538616560
Chromosome Location	chr9:140473752-140473753
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:162)
CpG islands
(count:61)
Chromatin interactive
region (count:17)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:162 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr9:140472948-140474025	Hela-S3	cervix:	n/a	n/a
2	MAX	chr9:140472835-140473986	HepG2	liver:	n/a	chr9:140473040-140473050
3	MAX	chr9:140472967-140473813	H1-hESC	embryonic stem cell:	n/a	chr9:140473040-140473050
4	GABPA	chr9:140472799-140474067	MCF-7	breast:	n/a	n/a
5	HCFC1	chr9:140472953-140473785	K562	blood:	n/a	n/a
6	NFATC1	chr9:140472977-140473764	GM12878	blood:	n/a	n/a
7	PML	chr9:140472938-140473766	K562	blood:	n/a	n/a
8	CTCF	chr9:140473297-140473761	Fibrobl	skin:	n/a	chr9:140473451-140473467 chr9:140473501-140473514
9	PBX3	chr9:140472913-140473815	A549	lung:	n/a	chr9:140473415-140473435
10	EP300	chr9:140472915-140473774	ECC-1	luminal epithelium:	n/a	chr9:140473467-140473483
11	POLR2A	chr9:140472939-140473765	GM12878	blood:	n/a	n/a
12	CTCF	chr9:140473096-140473918	K562	blood:	n/a	chr9:140473451-140473467 chr9:140473501-140473514
13	POLR2A	chr9:140472938-140473863	HepG2	liver:	n/a	n/a
14	CTCF	chr9:140473280-140473823	GM12892	blood:	n/a	chr9:140473451-140473467 chr9:140473501-140473514
15	E2F6	chr9:140473202-140473799	K562	blood:	n/a	n/a
16	CTCF	chr9:140473297-140473845	GM12891	blood:	n/a	chr9:140473451-140473467 chr9:140473501-140473514
17	ZNF384	chr9:140473126-140473812	K562	blood:	n/a	n/a
18	POLR2A	chr9:140472874-140474097	HL-60	blood:	n/a	n/a
19	GABPA	chr9:140472794-140473918	K562	blood:	n/a	n/a
20	HEY1	chr9:140472869-140473753	HepG2	liver:	n/a	chr9:140473040-140473055
21	POLR2A	chr9:140472948-140473933	GM12878	blood:	n/a	n/a
22	NR2C2	chr9:140473009-140473780	Hela-S3	cervix:	n/a	chr9:140473381-140473388
23	POLR2A	chr9:140473087-140473915	GM12878	blood:	n/a	n/a
24	MAX	chr9:140472844-140473766	A549	lung:	n/a	chr9:140473040-140473050
25	SREBP2	chr9:140472777-140473839	GM12878	blood:	n/a	n/a
26	BCL3	chr9:140472964-140473771	A549	lung:	n/a	chr9:140473056-140473069
27	POLR2A	chr9:140472901-140473764	GM12892	blood:	n/a	n/a
28	YY1	chr9:140473237-140474016	H1-hESC	embryonic stem cell:	n/a	chr9:140473807-140473821
29	CBX3	chr9:140472951-140473799	HCT-116	colon:	n/a	n/a
30	MYC	chr9:140472844-140473781	MCF10A-Er-Src	breast:	n/a	chr9:140473040-140473050
31	TBL1XR1	chr9:140473224-140473756	K562	blood:	n/a	n/a
32	RCOR1	chr9:140473054-140473909	K562	blood:	n/a	n/a
33	TEAD4	chr9:140472959-140473772	K562	blood:	n/a	n/a
34	POLR2A	chr9:140472942-140473934	GM12878	blood:	n/a	n/a
35	GTF2F1	chr9:140473290-140473813	K562	blood:	n/a	n/a
36	CTCF	chr9:140473303-140473820	GM19240	blood:	n/a	chr9:140473451-140473467 chr9:140473501-140473514
37	POLR2A	chr9:140472960-140473861	GM19193	blood:	n/a	n/a
38	STAT5A	chr9:140473071-140474020	GM12878	blood:	n/a	n/a
39	MYC	chr9:140472841-140474003	K562	blood:	n/a	chr9:140473040-140473050
40	POLR2A	chr9:140472924-140473796	HUVEC	blood vessel:	n/a	n/a
41	ELF1	chr9:140473113-140473781	MCF-7	breast:	n/a	n/a
42	MAX	chr9:140472871-140473770	ECC-1	luminal epithelium:	n/a	chr9:140473040-140473050
43	POLR2A	chr9:140472915-140473955	GM12892	blood:	n/a	n/a
44	RAD21	chr9:140473237-140473758	ECC-1	luminal epithelium:	n/a	n/a
45	POLR2A	chr9:140472833-140473881	U87	brain:	n/a	n/a
46	POLR2A	chr9:140473580-140474008	A549	lung:	n/a	n/a
47	CCNT2	chr9:140473022-140473782	K562	blood:	n/a	n/a
48	POLR2A	chr9:140473655-140473982	GM12891	blood:	n/a	n/a
49	POLR2A	chr9:140472880-140474094	ECC-1	luminal epithelium:	n/a	n/a
50	POLR2A	chr9:140472890-140473966	ECC-1	luminal epithelium:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140473704-140473754	HMEC	breast:	n/a
2	chr9:140473704-140473754	SK-N-SH	brain:	n/a
3	chr9:140473704-140473754	HRCEpiC	kidney:	n/a
4	chr9:140473704-140473754	BJ	skin:	n/a
5	chr9:140473704-140473754	SK-N-MC	brain:	n/a
6	chr9:140473704-140473754	MCF10A-Er-Src	breast:	n/a
7	chr9:140473704-140473754	ProgFib	skin:	n/a
8	chr9:140473704-140473754	AoSMC	blood vessel:	n/a
9	chr9:140473704-140473754	NB4	blood:	n/a
10	chr9:140473704-140473754	HAEpiC	amniotic membrane:	n/a
11	chr9:140473704-140473754	ECC-1	luminal epithelium:	n/a
12	chr9:140473704-140473754	PFSK-1	brain:	n/a
13	chr9:140473704-140473754	GM12892	blood:	n/a
14	chr9:140473704-140473754	Caco-2	colon:	n/a
15	chr9:140473704-140473754	AG09309	skin:	n/a
16	chr9:140473704-140473754	GM12878	blood:	n/a
17	chr9:140473704-140473754	K562	blood:	n/a
18	chr9:140473704-140473754	PANC-1	pancreas:	n/a
19	chr9:140473704-140473754	HRE	kidney:	n/a
20	chr9:140473704-140473754	CMK	blood:	n/a
21	chr9:140473704-140473754	BE2_C	brain:	n/a
22	chr9:140473704-140473754	HepG2	liver:	n/a
23	chr9:140473704-140473754	NHBE	bronchial:	n/a
24	chr9:140473704-140473754	LNCaP	prostate:	n/a
25	chr9:140473704-140473754	NT2-D1	testis:	n/a
26	chr9:140473704-140473754	A549	lung:	n/a
27	chr9:140473704-140473754	GM06990	blood:	n/a
28	chr9:140473704-140473754	AG09319	gingival:	n/a
29	chr9:140473704-140473754	HCM	heart:	n/a
30	chr9:140473704-140473754	NHDF-neo	bronchial:	n/a
31	chr9:140473704-140473754	H1-hESC	embryonic stem cell:	embryo
32	chr9:140473704-140473754	U87	brain:	n/a
33	chr9:140473704-140473754	Jurkat	blood:	n/a
34	chr9:140473704-140473754	HCPEpiC	choroid plexus:	n/a
35	chr9:140473704-140473754	IMR90	lung:	fetal
36	chr9:140473704-140473754	HCF	heart:	n/a
37	chr9:140473704-140473754	T-47D	breast:	n/a
38	chr9:140473704-140473754	AG04449	skin:	fetal
39	chr9:140473704-140473754	HPAEpiC	pulmonary alveolar:	n/a
40	chr9:140473704-140473754	GM12891	blood:	n/a
41	chr9:140473704-140473754	HL-60	blood:	n/a
42	chr9:140473704-140473754	HCT-116	colon:	n/a
43	chr9:140473704-140473754	Hela-S3	cervix:	n/a
44	chr9:140473704-140473754	HEEpiC	esophagus:	n/a
45	chr9:140473704-140473754	HUVEC	blood vessel:	n/a
46	chr9:140473704-140473754	AG10803	skin:	n/a
47	chr9:140473704-140473754	NH-A	brain:	n/a
48	chr9:140473704-140473754	HNPCEpiC	eye:	n/a
49	chr9:140473704-140473754	GM19239	blood:	n/a
50	chr9:140473704-140473754	RPTEC	kidney:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:140469278..140479132-chr9:140503165..140510984,27	MCF-7	breast:
2	chr9:140469283..140475998-chr9:140510945..140517022,12	K562	blood:
3	chr9:140470766..140479486-chr9:140497266..140502997,13	MCF-7	breast:
4	chr9:140470852..140475352-chr9:140511735..140515041,9	MCF-7	breast:
5	chr9:140473450..140475457-chr9:140537565..140540083,2	K562	blood:
6	chr9:140439204..140441132-chr9:140473629..140475589,2	MCF-7	breast:
7	chr9:140444243..140447461-chr9:140473220..140477204,4	MCF-7	breast:
8	chr9:140473487..140475608-chr9:140520167..140523048,2	K562	blood:
9	chr9:140470526..140476841-chr9:140479974..140487037,14	MCF-7	breast:
10	chr9:140135182..140137272-chr9:140472466..140474673,2	K562	blood:
11	chr9:140457953..140460745-chr9:140471921..140474546,2	K562	blood:
12	chr9:140473011..140477060-chr9:140511720..140517022,6	K562	blood:
13	chr9:140471797..140473910-chr9:140767835..140770122,2	K562	blood:
14	chr9:140443274..140446260-chr9:140471876..140474598,3	K562	blood:
15	chr9:140473638..140477283-chr9:140490504..140494912,4	K562	blood:
16	chr9:140470445..140476327-chr9:140498022..140503450,9	K562	blood:
17	chr9:140444420..140448721-chr9:140471876..140474832,3	K562	blood:

No data

Variant related genes	Relation type
DPH7	TF binding region
DPH7	CpG island
ENSG00000203987	Chromatin interaction
ENSG00000130653	Chromatin interaction
ENSG00000188229	Chromatin interaction
ENSG00000165724	Chromatin interaction
ENSG00000148399	Chromatin interaction
ENSG00000181090	Chromatin interaction
ENSG00000182154	Chromatin interaction
ENSG00000197070	Chromatin interaction
ENSG00000263933	Chromatin interaction
ENSG00000203993	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894452	chr9:139598108-140523429	Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	450 gene(s)	inside rSNPs	diseases
2	nsv894499	chr9:139810595-140734161	Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
3	nsv894502	chr9:139823670-140487108	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	349 gene(s)	inside rSNPs	diseases
4	nsv531664	chr9:140110329-140725056	ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	275 gene(s)	inside rSNPs	diseases
5	nsv531654	chr9:140110329-141033187	Flanking Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	281 gene(s)	inside rSNPs	diseases
6	nsv1047563	chr9:140219047-140560852	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
7	nsv540357	chr9:140219047-140560852	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	97 gene(s)	inside rSNPs	diseases
8	nsv531602	chr9:140240417-140535223	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	96 gene(s)	inside rSNPs	diseases
9	nsv932633	chr9:140240417-141053535	Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
10	nsv1035524	chr9:140251014-140751633	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
11	nsv1053628	chr9:140260666-141005637	Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
12	nsv534215	chr9:140286134-141008915	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	n/a
13	nsv1035388	chr9:140306746-140654768	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	96 gene(s)	inside rSNPs	n/a
14	nsv831762	chr9:140338779-140514107	Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	82 gene(s)	inside rSNPs	n/a
15	nsv1039672	chr9:140343466-140707505	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	85 gene(s)	inside rSNPs	n/a
16	nsv540358	chr9:140343466-140707505	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	85 gene(s)	inside rSNPs	n/a
17	nsv1041512	chr9:140350404-140612859	Strong transcription Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	n/a
18	nsv540359	chr9:140350404-140612859	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	n/a
19	nsv616022	chr9:140372570-140523429	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	65 gene(s)	inside rSNPs	n/a
20	nsv616023	chr9:140372570-140602887	Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	n/a
21	nsv531603	chr9:140378700-140590977	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	n/a
22	nsv531665	chr9:140378700-141073897	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	n/a
23	nsv868924	chr9:140407572-141053525	Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	n/a
24	nsv1039933	chr9:140408112-141005637	Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	n/a
25	nsv531666	chr9:140409395-141015925	Weak transcription Active TSS Strong transcription Genic enhancers Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	68 gene(s)	inside rSNPs	n/a
26	nsv616024	chr9:140414410-140536098	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	n/a
27	nsv831763	chr9:140439831-140614021	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	60 gene(s)	inside rSNPs	n/a
28	nsv540364	chr9:140447860-140514807	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	n/a
29	esv3398333	chr9:140451462-140814795	Strong transcription Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	60 gene(s)	inside rSNPs	n/a
30	nsv1052036	chr9:140452641-141018985	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
31	nsv540365	chr9:140452641-141018985	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
32	nsv949702	chr9:140466816-141027939	Strong transcription Active TSS Genic enhancers Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	62 gene(s)	inside rSNPs	n/a
33	nsv531667	chr9:140468821-140936261	Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	n/a
34	nsv894665	chr9:140469600-140523429	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	n/a
35	nsv894666	chr9:140470564-140518576	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	n/a
36	nsv894667	chr9:140473729-140518576	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140471800-140474000	Active TSS	H9 Cell Line	embryonic stem cell
2	chr9:140472000-140473800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr9:140472000-140473800	Active TSS	Right Atrium	heart
4	chr9:140472200-140474000	Active TSS	iPS-15b Cell Line	embryonic stem cell
5	chr9:140472200-140474000	Active TSS	iPS-20b Cell Line	embryonic stem cell
6	chr9:140472200-140474200	Active TSS	HepG2	liver
7	chr9:140472400-140473800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr9:140472400-140473800	Active TSS	Breast Myoepithelial Primary Cells	Breast
9	chr9:140472400-140473800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
10	chr9:140472400-140473800	Active TSS	Fetal Intestine Large	intestine
11	chr9:140472400-140473800	Active TSS	Fetal Kidney	kidney
12	chr9:140472400-140474000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
13	chr9:140472400-140474000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr9:140472400-140474000	Active TSS	Pancreatic Islets	Pancreatic Islet
15	chr9:140472400-140474200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr9:140472600-140473800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr9:140472600-140473800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr9:140472600-140473800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr9:140472600-140473800	Active TSS	Primary T cells from cord blood	blood
20	chr9:140472600-140473800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr9:140472600-140473800	Active TSS	Primary T killer memory cells from peripheral blood	blood
22	chr9:140472600-140473800	Active TSS	Aorta	Aorta
23	chr9:140472600-140473800	Active TSS	Brain Anterior Caudate	brain
24	chr9:140472600-140473800	Active TSS	Brain Cingulate Gyrus	brain
25	chr9:140472600-140473800	Active TSS	Colonic Mucosa	Colon
26	chr9:140472600-140473800	Active TSS	Colon Smooth Muscle	Colon
27	chr9:140472600-140473800	Active TSS	Fetal Brain Female	brain
28	chr9:140472600-140473800	Active TSS	Fetal Intestine Small	intestine
29	chr9:140472600-140473800	Active TSS	Fetal Stomach	stomach
30	chr9:140472600-140473800	Active TSS	Gastric	stomach
31	chr9:140472600-140473800	Active TSS	Left Ventricle	heart
32	chr9:140472600-140473800	Active TSS	Lung	lung
33	chr9:140472600-140473800	Active TSS	Psoas Muscle	Psoas
34	chr9:140472600-140473800	Active TSS	Rectal Mucosa Donor 29	rectum
35	chr9:140472600-140473800	Active TSS	Rectal Smooth Muscle	rectum
36	chr9:140472600-140474000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr9:140472600-140474000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr9:140472600-140474000	Active TSS	iPS-18 Cell Line	embryonic stem cell
39	chr9:140472600-140474000	Active TSS	Brain Angular Gyrus	brain
40	chr9:140472600-140474000	Active TSS	Ovary	ovary
41	chr9:140472600-140474000	Active TSS	Thymus	Thymus
42	chr9:140472600-140474000	Active TSS	HSMMtube	muscle
43	chr9:140472600-140474200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr9:140472600-140474400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr9:140472600-140474600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr9:140472800-140473800	Active TSS	Primary hematopoietic stem cells	blood
47	chr9:140472800-140473800	Active TSS	Liver	Liver
48	chr9:140472800-140473800	Active TSS	Brain Germinal Matrix	brain
49	chr9:140472800-140473800	Active TSS	Duodenum Smooth Muscle	Duodenum
50	chr9:140472800-140473800	Active TSS	Fetal Lung	lung

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