No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs567149837 |
chr9:79008191-79008192 |
Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs2501922 |
chr9:79008243-79008244 |
Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
3 |
rs560684072 |
chr9:79008280-79008281 |
Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs2490581 |
chr9:79008284-79008285 |
Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs35432738 |
chr9:79008305-79008306 |
Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
6 |
rs568790342 |
chr9:79008309-79008310 |
Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs189433163 |
chr9:79008335-79008336 |
Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs544294683 |
chr9:79008357-79008358 |
Active TSS Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs7022515 |
chr9:79008451-79008452 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
10 |
rs551321602 |
chr9:79008457-79008458 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs140034228 |
chr9:79008477-79008478 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs533836054 |
chr9:79008485-79008486 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs553581908 |
chr9:79008501-79008502 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs536039425 |
chr9:79008518-79008519 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs368958613 |
chr9:79008636-79008637 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs62567919 |
chr9:79008644-79008645 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs7045064 |
chr9:79008674-79008675 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
18 |
rs142200055 |
chr9:79008693-79008694 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs558087953 |
chr9:79008722-79008723 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs151223786 |
chr9:79008750-79008751 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs540664429 |
chr9:79008800-79008801 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs560368648 |
chr9:79008845-79008846 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs529375790 |
chr9:79008876-79008877 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs542385496 |
chr9:79008878-79008879 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs562357582 |
chr9:79008912-79008913 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs531460894 |
chr9:79008938-79008939 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs551388311 |
chr9:79008942-79008943 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs41288757 |
chr9:79008947-79008948 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs527278919 |
chr9:79008973-79008974 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs547401852 |
chr9:79008975-79008976 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs147845416 |
chr9:79009015-79009016 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs368029943 |
chr9:79009033-79009034 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs188086740 |
chr9:79009034-79009035 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs141491972 |
chr9:79009046-79009047 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs149930087 |
chr9:79009049-79009050 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs558211577 |
chr9:79009051-79009052 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs148289048 |
chr9:79009069-79009070 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs555959241 |
chr9:79009076-79009077 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs371365472 |
chr9:79009100-79009101 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs2490582 |
chr9:79009106-79009107 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
41 |
rs3739729 |
chr9:79009139-79009140 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs373469309 |
chr9:79009180-79009181 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs11548954 |
chr9:79009204-79009205 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
44 |
rs11548952 |
chr9:79009236-79009237 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
45 |
rs11548956 |
chr9:79009251-79009252 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs7026641 |
chr9:79009256-79009257 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
47 |
rs370875961 |
chr9:79009289-79009290 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs142046364 |
chr9:79009290-79009291 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs3739730 |
chr9:79009347-79009348 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
50 |
rs542721406 |
chr9:79009354-79009355 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|