Variant report

Variant	esv3327868
Chromosome Location	chr19:35759137-35761985
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:890)
CpG islands
(count:733)
Chromatin interactive
region (count:48)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:890 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:35760575-35760765	K562	blood:	n/a	n/a
2	ARID3A	chr19:35760427-35760580	HepG2	liver:	n/a	n/a
3	ATF2	chr19:35760455-35760756	GM12878	blood:	n/a	n/a
4	ATF3	chr19:35760436-35760816	K562	blood:	n/a	n/a
5	ATF3	chr19:35759681-35759888	HepG2	liver:	n/a	n/a
6	ATF3	chr19:35760302-35760774	A549	lung:	n/a	n/a
7	ATF3	chr19:35759746-35759868	GM12878	blood:	n/a	n/a
8	ATF3	chr19:35759677-35759909	K562	blood:	n/a	n/a
9	BACH1	chr19:35760675-35760868	K562	blood:	n/a	n/a
10	BCL3	chr19:35757335-35759150	A549	lung:	n/a	chr19:35758899-35758908
11	BCL3	chr19:35758185-35759297	GM12878	blood:	n/a	chr19:35759169-35759182 chr19:35758899-35758908
12	BCL3	chr19:35760271-35760993	A549	lung:	n/a	n/a
13	BCLAF1	chr19:35760253-35760766	GM12878	blood:	n/a	n/a
14	BCLAF1	chr19:35760340-35760864	GM12878	blood:	n/a	n/a
15	BCLAF1	chr19:35758285-35759163	GM12878	blood:	n/a	chr19:35758899-35758908
16	BHLHE40	chr19:35760333-35760901	K562	blood:	n/a	n/a
17	BHLHE40	chr19:35758694-35759266	GM12878	blood:	n/a	n/a
18	BHLHE40	chr19:35759679-35760018	K562	blood:	n/a	n/a
19	BHLHE40	chr19:35758512-35759202	K562	blood:	n/a	n/a
20	BHLHE40	chr19:35760367-35760860	HepG2	liver:	n/a	n/a
21	BHLHE40	chr19:35759714-35759937	GM12878	blood:	n/a	n/a
22	BHLHE40	chr19:35760408-35760892	GM12878	blood:	n/a	n/a
23	BRCA1	chr19:35760430-35760606	H1-hESC	embryonic stem cell:	n/a	n/a
24	BRCA1	chr19:35760534-35760858	Hela-S3	cervix:	n/a	n/a
25	CBX3	chr19:35760325-35760913	K562	blood:	n/a	n/a
26	CBX3	chr19:35760636-35760809	K562	blood:	n/a	n/a
27	CCNT2	chr19:35757482-35760936	K562	blood:	n/a	chr19:35759171-35759180 chr19:35759236-35759245 chr19:35760462-35760471
28	CEBPB	chr19:35760460-35760899	Hela-S3	cervix:	n/a	n/a
29	CEBPD	chr19:35759959-35760606	HepG2	liver:	n/a	n/a
30	CEBPD	chr19:35760315-35760634	K562	blood:	n/a	n/a
31	CEBPD	chr19:35758719-35759384	HepG2	liver:	n/a	n/a
32	CHD1	chr19:35760352-35760835	GM12878	blood:	n/a	n/a
33	CHD1	chr19:35760356-35760564	H1-hESC	embryonic stem cell:	n/a	n/a
34	CHD1	chr19:35759515-35759643	GM12878	blood:	n/a	chr19:35759548-35759558
35	CHD2	chr19:35758217-35759420	Hela-S3	cervix:	n/a	n/a
36	CHD2	chr19:35759728-35760026	Hela-S3	cervix:	n/a	n/a
37	CHD2	chr19:35760374-35760890	GM12878	blood:	n/a	n/a
38	CHD2	chr19:35760353-35760734	K562	blood:	n/a	n/a
39	CHD2	chr19:35758749-35759279	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD2	chr19:35758127-35759348	K562	blood:	n/a	n/a
41	CHD2	chr19:35761123-35761137	GM12878	blood:	n/a	n/a
42	CHD2	chr19:35758851-35759317	GM12878	blood:	n/a	n/a
43	CHD2	chr19:35760280-35760887	Hela-S3	cervix:	n/a	n/a
44	CHD2	chr19:35760770-35760898	HepG2	liver:	n/a	n/a
45	CHD2	chr19:35760410-35760540	HepG2	liver:	n/a	n/a
46	CHD2	chr19:35760441-35760831	H1-hESC	embryonic stem cell:	n/a	n/a
47	CREB1	chr19:35760629-35760841	A549	lung:	n/a	n/a
48	CREB1	chr19:35758306-35760043	A549	lung:	n/a	n/a
49	CREB1	chr19:35760200-35761059	HepG2	liver:	n/a	n/a
50	CREB1	chr19:35760271-35760949	A549	lung:	n/a	n/a

(count:733 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:35759698-35759748	HPAEpiC	pulmonary alveolar:	n/a
2	chr19:35759698-35759748	HPAEpiC	pulmonary alveolar:	n/a
3	chr19:35759696-35759746	PANC-1	pancreas:	n/a
4	chr19:35760861-35760911	HPAEpiC	pulmonary alveolar:	n/a
5	chr19:35759185-35759235	HNPCEpiC	eye:	n/a
6	chr19:35761678-35761728	HUVEC	blood vessel:	n/a
7	chr19:35760677-35760727	GM12878	blood:	n/a
8	chr19:35759233-35759283	T-47D	breast:	n/a
9	chr19:35760554-35760604	SK-N-SH	brain:	n/a
10	chr19:35760861-35760911	AoSMC	blood vessel:	n/a
11	chr19:35761678-35761728	HPAEpiC	pulmonary alveolar:	n/a
12	chr19:35759698-35759748	NT2-D1	testis:	n/a
13	chr19:35760554-35760604	NHBE	bronchial:	n/a
14	chr19:35759230-35759280	HRCEpiC	kidney:	n/a
15	chr19:35760554-35760604	K562	blood:	n/a
16	chr19:35759230-35759280	NB4	blood:	n/a
17	chr19:35760861-35760911	IMR90	lung:	fetal
18	chr19:35760554-35760604	PFSK-1	brain:	n/a
19	chr19:35759698-35759748	PFSK-1	brain:	n/a
20	chr19:35759233-35759283	HRCEpiC	kidney:	n/a
21	chr19:35759995-35760045	PFSK-1	brain:	n/a
22	chr19:35759696-35759746	SAEC	small airway:	n/a
23	chr19:35759696-35759746	GM12891	blood:	n/a
24	chr19:35760677-35760727	HAEpiC	amniotic membrane:	n/a
25	chr19:35761435-35761485	MCF10A-Er-Src	breast:	n/a
26	chr19:35759696-35759746	HCM	heart:	n/a
27	chr19:35761435-35761485	ECC-1	luminal epithelium:	n/a
28	chr19:35759692-35759742	HRPEpiC	eye:	n/a
29	chr19:35761435-35761485	NB4	blood:	n/a
30	chr19:35760861-35760911	RPTEC	kidney:	n/a
31	chr19:35759696-35759746	PFSK-1	brain:	n/a
32	chr19:35759692-35759742	H1-hESC	embryonic stem cell:	embryo
33	chr19:35761678-35761728	HIPEpiC	eye:	n/a
34	chr19:35761435-35761485	HIPEpiC	eye:	n/a
35	chr19:35761678-35761728	AG09309	skin:	n/a
36	chr19:35761435-35761485	PrEC	prostate:	n/a
37	chr19:35761678-35761728	LNCaP	prostate:	n/a
38	chr19:35761435-35761485	GM06990	blood:	n/a
39	chr19:35760677-35760727	HCT-116	colon:	n/a
40	chr19:35759995-35760045	CMK	blood:	n/a
41	chr19:35759698-35759748	NB4	blood:	n/a
42	chr19:35759696-35759746	HepG2	liver:	n/a
43	chr19:35759230-35759280	HMEC	breast:	n/a
44	chr19:35759995-35760045	AG09309	skin:	n/a
45	chr19:35759185-35759235	Caco-2	colon:	n/a
46	chr19:35760861-35760911	HEEpiC	esophagus:	n/a
47	chr19:35759230-35759280	AG09319	gingival:	n/a
48	chr19:35760677-35760727	NHDF-neo	bronchial:	n/a
49	chr19:35759698-35759748	MCF-7	breast:	n/a
50	chr19:35759696-35759746	ECC-1	luminal epithelium:	n/a

(count:48 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:35760565..35761068-chr19:36036654..36037399,2	MCF-7	breast:
2	chr19:35758844..35760411-chr19:36208018..36210634,2	MCF-7	breast:
3	chr19:35757401..35760609-chr19:35817502..35820242,3	MCF-7	breast:
4	chr19:35644831..35647736-chr19:35757479..35762010,7	K562	blood:
5	chr19:35758925..35762628-chr19:36133039..36136228,4	MCF-7	breast:
6	chr19:35621827..35625973-chr19:35758783..35761524,4	K562	blood:
7	chr19:35631425..35638367-chr19:35753629..35761294,12	MCF-7	breast:
8	chr19:35759065..35761020-chr19:35999917..36001765,3	MCF-7	breast:
9	chr19:35489265..35492467-chr19:35757325..35761392,4	MCF-7	breast:
10	chr19:35606190..35608948-chr19:35758089..35760564,2	MCF-7	breast:
11	chr19:35653961..35658211-chr19:35756444..35760028,4	K562	blood:
12	chr19:35757352..35763490-chr19:35798817..35804347,10	MCF-7	breast:
13	chr19:35755149..35764508-chr19:35799437..35813142,44	MCF-7	breast:
14	chr19:35759152..35761759-chr19:35938790..35942242,3	MCF-7	breast:
15	chr19:35703379..35705750-chr19:35757891..35759671,2	K562	blood:
16	chr19:35758851..35760622-chr19:36036103..36038320,2	MCF-7	breast:
17	chr19:35756917..35760158-chr19:36118192..36121519,3	K562	blood:
18	chr19:35760524..35761090-chr19:35804405..35805080,2	MCF-7	breast:
19	chr19:35739649..35740153-chr19:35760440..35761040,2	K562	blood:
20	chr19:35758290..35762202-chr19:35770035..35773582,5	K562	blood:
21	chr19:35758518..35761825-chr19:35766786..35769886,4	K562	blood:
22	chr19:35760212..35761043-chr19:35985491..35986483,3	K562	blood:
23	chr19:35653961..35659020-chr19:35755691..35760689,8	K562	blood:
24	chr19:35738397..35739313-chr19:35760217..35761209,4	K562	blood:
25	chr19:35759344..35762217-chr19:35841314..35843989,4	MCF-7	breast:
26	chr19:35759096..35761188-chr19:36236088..36238876,2	MCF-7	breast:
27	chr19:35758876..35761296-chr19:36162627..36164596,2	MCF-7	breast:
28	chr19:35557704..35558690-chr19:35758364..35759482,3	K562	blood:
29	chr19:35631019..35636055-chr19:35759105..35762052,6	K562	blood:
30	chr19:35632786..35634532-chr19:35758751..35760736,2	MCF-7	breast:
31	chr19:35759827..35760405-chr19:35809677..35810195,2	MCF-7	breast:
32	chr19:35757743..35760122-chr19:36207492..36209553,2	MCF-7	breast:
33	chr19:35601805..35607657-chr19:35757139..35762248,8	MCF-7	breast:
34	chr19:35760013..35761636-chr19:35979753..35981551,2	MCF-7	breast:
35	chr19:35760058..35760782-chr19:35985935..35986619,2	MCF-7	breast:
36	chr19:35761264..35763399-chr19:35801388..35804082,2	K562	blood:
37	chr19:35758155..35760598-chr19:35818136..35820258,3	MCF-7	breast:
38	chr19:35757206..35760502-chr19:36133299..36134978,3	K562	blood:
39	chr19:35758432..35759374-chr8:145149684..145150200,2	Hela-S3	cervix:
40	chr19:35643953..35647244-chr19:35757991..35762600,5	K562	blood:
41	chr19:35519701..35523372-chr19:35759122..35762184,3	MCF-7	breast:
42	chr19:35758351..35760547-chr19:36035244..36036936,2	K562	blood:
43	chr19:35758781..35763844-chr19:35840402..35843897,5	K562	blood:
44	chr19:35632199..35636848-chr19:35758097..35761761,8	K562	blood:
45	chr19:35758596..35761330-chr19:35808386..35811398,6	MCF-7	breast:
46	chr19:35606807..35607648-chr19:35759190..35759979,2	MCF-7	breast:
47	chr19:35758542..35759413-chr9:89335512..89336479,2	Hela-S3	cervix:
48	chr19:35757826..35762091-chr19:35999806..36002359,4	MCF-7	breast:

No data

Variant related genes	Relation type
USF2	TF binding region
USF2	CpG island
ENSG00000105699	chromatin interactions
ENSG00000105698	chromatin interactions
ENSG00000089327	chromatin interactions
ENSG00000105711	chromatin interactions
ENSG00000236144	chromatin interactions
ENSG00000266964	chromatin interactions
ENSG00000126254	chromatin interactions
ENSG00000126262	chromatin interactions
ENSG00000126266	chromatin interactions
ENSG00000226510	chromatin interactions
ENSG00000012124	chromatin interactions
ENSG00000089356	chromatin interactions
ENSG00000179091	chromatin interactions
ENSG00000188508	chromatin interactions
ENSG00000188223	chromatin interactions
ENSG00000153902	chromatin interactions
ENSG00000205155	chromatin interactions
ENSG00000105697	chromatin interactions
ENSG00000267120	chromatin interactions
ENSG00000161265	chromatin interactions
ENSG00000221946	chromatin interactions
ENSG00000272333	chromatin interactions
ENSG00000269303	chromatin interactions
ENSG00000161249	chromatin interactions
ENSG00000105695	chromatin interactions
ENSG00000089351	chromatin interactions
ENSG00000105672	chromatin interactions
ENSG00000105677	chromatin interactions

Extended variants
information (count: 106 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:106 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs113187656	chr19:35759140-35759141	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
2	rs531934263	chr19:35759244-35759245	Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
3	rs2853335	chr19:35759249-35759250	Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
4	rs148565969	chr19:35759255-35759256	Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
5	rs369711945	chr19:35759362-35759363	Active TSS Weak transcription	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
6	rs34490906	chr19:35759374-35759375	Active TSS Weak transcription	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
7	rs199688886	chr19:35759409-35759410	Active TSS Weak transcription	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
8	rs35519669	chr19:35759412-35759413	Active TSS Weak transcription	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
9	rs201180094	chr19:35759610-35759611	Active TSS Weak transcription	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
10	rs568675042	chr19:35759656-35759657	Active TSS Weak transcription	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
11	rs2515621	chr19:35760167-35760168	Active TSS Weak transcription	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
12	rs368002921	chr19:35760322-35760323	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
13	rs370348965	chr19:35760324-35760325	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
14	rs570741556	chr19:35760340-35760341	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
15	rs539849325	chr19:35760342-35760343	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
16	rs374238178	chr19:35760369-35760370	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
17	rs200773644	chr19:35760373-35760374	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
18	rs569973377	chr19:35760409-35760410	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	27 gene(s)	Overlapped CNVs	n/a
19	rs2272539	chr19:35760413-35760414	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	26 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs555094179	chr19:35760448-35760449	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
21	rs140201728	chr19:35760452-35760453	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
22	rs372675105	chr19:35760464-35760465	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
23	rs540688534	chr19:35760605-35760606	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
24	rs2515622	chr19:35760622-35760623	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	26 gene(s)	Overlapped CNVs	n/a
25	rs368165249	chr19:35760756-35760757	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	25 gene(s)	Overlapped CNVs	n/a
26	rs543449268	chr19:35760766-35760767	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	25 gene(s)	Overlapped CNVs	n/a
27	rs111781333	chr19:35760847-35760848	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region Chromatin interactive region	25 gene(s)	Overlapped CNVs	n/a
28	rs555503800	chr19:35760880-35760881	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	25 gene(s)	Overlapped CNVs	n/a
29	rs150053370	chr19:35760931-35760932	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region Chromatin interactive region	25 gene(s)	Overlapped CNVs	n/a
30	rs563149461	chr19:35760937-35760938	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription	TF binding region Chromatin interactive region	25 gene(s)	Overlapped CNVs	n/a
31	rs576764367	chr19:35761038-35761039	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	25 gene(s)	Overlapped CNVs	n/a
32	rs11882423	chr19:35761078-35761079	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
33	rs535308077	chr19:35761080-35761081	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
34	rs371635668	chr19:35761089-35761090	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
35	rs562230304	chr19:35761100-35761101	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
36	rs117832846	chr19:35761101-35761102	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
37	rs547552177	chr19:35761102-35761103	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
38	rs184469201	chr19:35761105-35761106	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
39	rs113867458	chr19:35761121-35761122	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
40	rs550107205	chr19:35761126-35761127	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
41	rs569715966	chr19:35761174-35761175	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
42	rs535334880	chr19:35761183-35761184	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
43	rs548878393	chr19:35761188-35761189	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	24 gene(s)	Overlapped CNVs	n/a
44	rs565520878	chr19:35761192-35761193	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
45	rs146788054	chr19:35761193-35761194	Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
46	rs557561538	chr19:35761217-35761218	Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
47	rs577629131	chr19:35761229-35761230	Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
48	rs553536992	chr19:35761234-35761235	Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
49	rs189964011	chr19:35761239-35761240	Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	19 gene(s)	Overlapped CNVs	n/a
50	rs374238676	chr19:35761302-35761303	Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	18 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Ovarian cancer	21397856	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Ovarian cancer	20844748	CNVD
Non-small cell lung cancer	21829676	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cancer	21183584	CNVD
Honadal dysgenesis	21048976	CNVD
Neurodevelopmental disorder	22521361	CNVD
Endometrial cancer	23636398	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Gastric cancer	21811585	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Multiple myeloma	17550852	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD

Chromatin state (count:486 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:35757600-35761000	Active TSS	Hela-S3	cervix
2	chr19:35757600-35761000	Active TSS	HSMM	muscle
3	chr19:35757600-35761200	Active TSS	NH-A	brain
4	chr19:35757800-35760600	Active TSS	Lung	lung
5	chr19:35757800-35760800	Active TSS	Ovary	ovary
6	chr19:35757800-35761000	Active TSS	HUES6 Cell Line	embryonic stem cell
7	chr19:35757800-35761000	Active TSS	iPS-15b Cell Line	embryonic stem cell
8	chr19:35757800-35761000	Active TSS	iPS-20b Cell Line	embryonic stem cell
9	chr19:35757800-35761000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr19:35757800-35761000	Active TSS	HSMMtube	muscle
11	chr19:35758000-35759200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr19:35758000-35759200	Transcr. at gene 5' and 3'	Right Atrium	heart
13	chr19:35758000-35760800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr19:35758000-35760800	Active TSS	Duodenum Smooth Muscle	Duodenum
15	chr19:35758000-35760800	Active TSS	Left Ventricle	heart
16	chr19:35758000-35760800	Active TSS	Psoas Muscle	Psoas
17	chr19:35758000-35760800	Active TSS	Small Intestine	intestine
18	chr19:35758000-35761000	Active TSS	HUES64 Cell Line	embryonic stem cell
19	chr19:35758000-35761000	Active TSS	Aorta	Aorta
20	chr19:35758000-35761000	Active TSS	Brain Angular Gyrus	brain
21	chr19:35758000-35761000	Active TSS	Fetal Intestine Large	intestine
22	chr19:35758000-35761000	Active TSS	A549	lung
23	chr19:35758000-35761000	Active TSS	NHLF	lung
24	chr19:35758000-35761200	Active TSS	ES-I3 Cell Line	embryonic stem cell
25	chr19:35758000-35761200	Active TSS	iPS-18 Cell Line	embryonic stem cell
26	chr19:35758000-35761200	Active TSS	Colon Smooth Muscle	Colon
27	chr19:35758000-35761200	Active TSS	Pancreatic Islets	Pancreatic Islet
28	chr19:35758200-35759200	Active TSS	Primary T helper cells PMA-I stimulated	--
29	chr19:35758200-35760600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr19:35758200-35760600	Active TSS	Right Ventricle	heart
31	chr19:35758200-35760600	Active TSS	Dnd41	blood
32	chr19:35758200-35760600	Active TSS	K562	blood
33	chr19:35758200-35760800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr19:35758200-35760800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr19:35758200-35760800	Active TSS	Breast Myoepithelial Primary Cells	Breast
36	chr19:35758200-35760800	Active TSS	Primary T cells from cord blood	blood
37	chr19:35758200-35760800	Active TSS	Primary T helper naive cells fromperipheralblood	blood
38	chr19:35758200-35760800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr19:35758200-35760800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr19:35758200-35760800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr19:35758200-35760800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr19:35758200-35760800	Active TSS	Brain Hippocampus Middle	brain
43	chr19:35758200-35760800	Active TSS	Duodenum Mucosa	Duodenum
44	chr19:35758200-35760800	Active TSS	Placenta Amnion	Placenta Amnion
45	chr19:35758200-35760800	Active TSS	Sigmoid Colon	Sigmoid Colon
46	chr19:35758200-35760800	Active TSS	Thymus	Thymus
47	chr19:35758200-35761000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr19:35758200-35761000	Active TSS	HUES48 Cell Line	embryonic stem cell
49	chr19:35758200-35761000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
50	chr19:35758200-35761000	Active TSS	Fetal Brain Female	brain

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