Variant report

Variant rs563149461
Chromosome Location chr19:35760937-35760938
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:35757600-35761000 Active TSS Hela-S3 cervix
2 chr19:35757600-35761000 Active TSS HSMM muscle
3 chr19:35757600-35761200 Active TSS NH-A brain
4 chr19:35757800-35761000 Active TSS HUES6 Cell Line embryonic stem cell
5 chr19:35757800-35761000 Active TSS iPS-15b Cell Line embryonic stem cell
6 chr19:35757800-35761000 Active TSS iPS-20b Cell Line embryonic stem cell
7 chr19:35757800-35761000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr19:35757800-35761000 Active TSS HSMMtube muscle
9 chr19:35758000-35761000 Active TSS HUES64 Cell Line embryonic stem cell
10 chr19:35758000-35761000 Active TSS Aorta Aorta
11 chr19:35758000-35761000 Active TSS Brain Angular Gyrus brain
12 chr19:35758000-35761000 Active TSS Fetal Intestine Large intestine
13 chr19:35758000-35761000 Active TSS A549 lung
14 chr19:35758000-35761000 Active TSS NHLF lung
15 chr19:35758000-35761200 Active TSS ES-I3 Cell Line embryonic stem cell
16 chr19:35758000-35761200 Active TSS iPS-18 Cell Line embryonic stem cell
17 chr19:35758000-35761200 Active TSS Colon Smooth Muscle Colon
18 chr19:35758000-35761200 Active TSS Pancreatic Islets Pancreatic Islet
19 chr19:35758200-35761000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr19:35758200-35761000 Active TSS HUES48 Cell Line embryonic stem cell
21 chr19:35758200-35761000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
22 chr19:35758200-35761000 Active TSS Fetal Brain Female brain
23 chr19:35758200-35761000 Active TSS Gastric stomach
24 chr19:35758200-35761000 Active TSS Rectal Mucosa Donor 29 rectum
25 chr19:35758200-35761000 Active TSS GM12878-XiMat blood
26 chr19:35758200-35761000 Active TSS HepG2 liver
27 chr19:35758200-35761000 Active TSS HUVEC blood vessel
28 chr19:35758200-35761000 Active TSS NHEK skin
29 chr19:35758200-35761000 Active TSS Osteobl bone
30 chr19:35758200-35761200 Active TSS H9 Cell Line embryonic stem cell
31 chr19:35758200-35761200 Active TSS Muscle Satellite Cultured Cells --
32 chr19:35758200-35761200 Active TSS Rectal Smooth Muscle rectum
33 chr19:35758400-35761000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr19:35758400-35761000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr19:35758400-35761000 Active TSS Brain Cingulate Gyrus brain
36 chr19:35758400-35761000 Active TSS Brain Inferior Temporal Lobe brain
37 chr19:35758400-35761200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr19:35758600-35761000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr19:35758600-35761000 Active TSS Brain Anterior Caudate brain
40 chr19:35758800-35761000 Active TSS H1 Cell Line embryonic stem cell
41 chr19:35759000-35761000 Weak transcription Fetal Lung lung
42 chr19:35759000-35761000 Weak transcription Stomach Mucosa stomach
43 chr19:35760200-35761000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr19:35760200-35761000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
45 chr19:35760200-35761000 Active TSS Brain Substantia Nigra brain
46 chr19:35760400-35761000 Active TSS Primary T helper naive cells from peripheral blood blood
47 chr19:35760400-35761000 Active TSS Primary T killer memory cells from peripheral blood blood
48 chr19:35760400-35761000 Enhancers Fetal Brain Male brain
49 chr19:35760400-35761200 Active TSS Fetal Kidney kidney
50 chr19:35760600-35761000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived

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