Variant report

Variant	esv3333136
Chromosome Location	chr22:31704947-31758417
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2013)
CpG islands
(count:1099)
Chromatin interactive
region (count:81)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2013 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr22:31709400-31709574	HepG2	liver:	n/a	n/a
2	ARID3A	chr22:31709376-31709564	K562	blood:	n/a	n/a
3	ARID3A	chr22:31735051-31735555	HepG2	liver:	n/a	n/a
4	ARID3A	chr22:31742833-31743138	HepG2	liver:	n/a	n/a
5	ARID3A	chr22:31746414-31746945	HepG2	liver:	n/a	n/a
6	ARID3A	chr22:31741855-31742012	HepG2	liver:	n/a	n/a
7	ATF2	chr22:31738736-31740519	H1-hESC	embryonic stem cell:	n/a	chr22:31740483-31740497
8	ATF2	chr22:31742718-31743223	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr22:31743248-31743867	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr22:31739256-31739910	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr22:31743480-31743941	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr22:31741717-31742056	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr22:31743420-31744016	GM12878	blood:	n/a	n/a
14	ATF2	chr22:31741749-31742049	GM12878	blood:	n/a	n/a
15	ATF3	chr22:31741808-31742159	GM12878	blood:	n/a	chr22:31742051-31742060
16	ATF3	chr22:31741822-31742111	K562	blood:	n/a	chr22:31742051-31742060
17	BACH1	chr22:31739195-31739521	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr22:31742727-31743927	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr22:31741656-31742492	H1-hESC	embryonic stem cell:	n/a	n/a
20	BATF	chr22:31725843-31726089	GM12878	blood:	n/a	chr22:31725979-31725990
21	BATF	chr22:31727266-31727418	GM12878	blood:	n/a	n/a
22	BCL11A	chr22:31739289-31739599	H1-hESC	embryonic stem cell:	n/a	n/a
23	BCL11A	chr22:31739384-31739548	H1-hESC	embryonic stem cell:	n/a	n/a
24	BCL3	chr22:31742644-31743227	GM12878	blood:	n/a	n/a
25	BCLAF1	chr22:31742681-31743033	GM12878	blood:	n/a	n/a
26	BCLAF1	chr22:31741640-31742160	GM12878	blood:	n/a	chr22:31742038-31742051 chr22:31741940-31741953
27	BCLAF1	chr22:31743103-31744033	GM12878	blood:	n/a	chr22:31743466-31743479 chr22:31743289-31743302
28	BCLAF1	chr22:31741603-31742115	GM12878	blood:	n/a	chr22:31742038-31742051 chr22:31741940-31741953
29	BHLHE40	chr22:31731018-31731025	HepG2	liver:	n/a	n/a
30	BHLHE40	chr22:31739979-31740200	GM12878	blood:	n/a	n/a
31	BHLHE40	chr22:31741505-31743828	GM12878	blood:	n/a	chr22:31743287-31743303 chr22:31742497-31742513 chr22:31741619-31741635
32	BHLHE40	chr22:31742313-31742551	A549	lung:	n/a	chr22:31742497-31742513
33	BHLHE40	chr22:31709318-31709605	GM12878	blood:	n/a	n/a
34	BHLHE40	chr22:31741519-31743187	HepG2	liver:	n/a	chr22:31742497-31742513 chr22:31741619-31741635
35	BHLHE40	chr22:31742318-31742559	HepG2	liver:	n/a	chr22:31742497-31742513
36	BHLHE40	chr22:31709493-31709604	K562	blood:	n/a	n/a
37	BHLHE40	chr22:31741794-31741994	A549	lung:	n/a	n/a
38	BHLHE40	chr22:31741517-31742660	K562	blood:	n/a	chr22:31742497-31742513 chr22:31741619-31741635
39	BHLHE40	chr22:31735120-31735690	HepG2	liver:	n/a	n/a
40	BHLHE40	chr22:31740564-31740752	GM12878	blood:	n/a	n/a
41	BHLHE40	chr22:31742296-31742554	HepG2	liver:	n/a	chr22:31742497-31742513
42	BRCA1	chr22:31741842-31742031	HepG2	liver:	n/a	n/a
43	BRCA1	chr22:31743502-31743965	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr22:31743119-31743129	GM12878	blood:	n/a	n/a
45	BRCA1	chr22:31742350-31742495	Hela-S3	cervix:	n/a	n/a
46	BRCA1	chr22:31735263-31735315	HepG2	liver:	n/a	n/a
47	BRCA1	chr22:31740380-31740555	H1-hESC	embryonic stem cell:	n/a	n/a
48	BRCA1	chr22:31748014-31748050	HepG2	liver:	n/a	n/a
49	CCNT2	chr22:31741777-31742518	K562	blood:	n/a	n/a
50	CCNT2	chr22:31741319-31741451	K562	blood:	n/a	n/a

(count:1099 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr22:31740944-31740994	SKMC	muscle:	n/a
2	chr22:31740944-31740994	SKMC	muscle:	n/a
3	chr22:31742478-31742528	PFSK-1	brain:	n/a
4	chr22:31742955-31743005	HNPCEpiC	eye:	n/a
5	chr22:31741741-31741791	K562	blood:	n/a
6	chr22:31741284-31741334	GM06990	blood:	n/a
7	chr22:31737754-31737804	Hela-S3	cervix:	n/a
8	chr22:31741284-31741334	AG10803	skin:	n/a
9	chr22:31739936-31739986	HEEpiC	esophagus:	n/a
10	chr22:31742478-31742528	NHDF-neo	bronchial:	n/a
11	chr22:31743738-31743788	GM06990	blood:	n/a
12	chr22:31742478-31742528	ECC-1	luminal epithelium:	n/a
13	chr22:31742484-31742534	SAEC	small airway:	n/a
14	chr22:31743488-31743538	HEEpiC	esophagus:	n/a
15	chr22:31742484-31742534	SK-N-MC	brain:	n/a
16	chr22:31739936-31739986	Jurkat	blood:	n/a
17	chr22:31741284-31741334	BJ	skin:	n/a
18	chr22:31742478-31742528	GM19239	blood:	n/a
19	chr22:31741731-31741781	AG04449	skin:	fetal
20	chr22:31742484-31742534	SKMC	muscle:	n/a
21	chr22:31739936-31739986	SAEC	small airway:	n/a
22	chr22:31746540-31746590	BJ	skin:	n/a
23	chr22:31737754-31737804	SKMC	muscle:	n/a
24	chr22:31742478-31742528	BJ	skin:	n/a
25	chr22:31743488-31743538	Caco-2	colon:	n/a
26	chr22:31741284-31741334	HEK293	kidney:	embryo
27	chr22:31742478-31742528	MCF10A-Er-Src	breast:	n/a
28	chr22:31743488-31743538	AG09309	skin:	n/a
29	chr22:31743558-31743608	HMEC	breast:	n/a
30	chr22:31746540-31746590	H1-hESC	embryonic stem cell:	embryo
31	chr22:31743738-31743788	HRE	kidney:	n/a
32	chr22:31742484-31742534	NT2-D1	testis:	n/a
33	chr22:31736976-31737026	HepG2	liver:	n/a
34	chr22:31738549-31738599	HMEC	breast:	n/a
35	chr22:31741741-31741791	HL-60	blood:	n/a
36	chr22:31739936-31739986	IMR90	lung:	fetal
37	chr22:31741731-31741781	HMEC	breast:	n/a
38	chr22:31743738-31743788	MCF10A-Er-Src	breast:	n/a
39	chr22:31742955-31743005	ovcar-3	ovarian:	n/a
40	chr22:31742478-31742528	HPAEpiC	pulmonary alveolar:	n/a
41	chr22:31742478-31742528	HRCEpiC	kidney:	n/a
42	chr22:31746540-31746590	HL-60	blood:	n/a
43	chr22:31742478-31742528	GM12878	blood:	n/a
44	chr22:31746540-31746590	MCF10A-Er-Src	breast:	n/a
45	chr22:31722284-31722334	SKMC	muscle:	n/a
46	chr22:31736976-31737026	HCPEpiC	choroid plexus:	n/a
47	chr22:31722284-31722334	ECC-1	luminal epithelium:	n/a
48	chr22:31742955-31743005	PFSK-1	brain:	n/a
49	chr22:31736976-31737026	HIPEpiC	eye:	n/a
50	chr22:31742955-31743005	GM12891	blood:	n/a

(count:81 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr22:31741632..31742462-chr22:31794953..31795605,3	Hela-S3	cervix:
2	chr22:31687347..31689011-chr22:31741919..31743859,2	K562	blood:
3	chr22:31642721..31645848-chr22:31739450..31742880,5	MCF-7	breast:
4	chr12:92539147..92539724-chr22:31742125..31742858,2	Hela-S3	cervix:
5	chr22:31696471..31699232-chr22:31743755..31746050,2	MCF-7	breast:
6	chr22:31685063..31688809-chr22:31720351..31723222,3	MCF-7	breast:
7	chr22:31707932..31710940-chr22:31717264..31720146,3	MCF-7	breast:
8	chr22:31741916..31742662-chr9:100745388..100746260,2	Hela-S3	cervix:
9	chr22:31709484..31711779-chr22:31717632..31720402,2	MCF-7	breast:
10	chr20:33542963..33543794-chr22:31742378..31743055,2	Hela-S3	cervix:
11	chr22:31684664..31691252-chr22:31735490..31744100,29	MCF-7	breast:
12	chr22:31741315..31744300-chr22:31752063..31756398,4	K562	blood:
13	chr22:31743200..31743724-chr6:34204462..34205262,2	Hela-S3	cervix:
14	chr22:31687094..31690101-chr22:31724407..31726965,4	MCF-7	breast:
15	chr22:31742290..31744009-chr22:31883766..31886602,4	MCF-7	breast:
16	chr22:31719691..31721873-chr22:31722366..31726598,4	K562	blood:
17	chr22:31749139..31751086-chr22:31794921..31796685,2	MCF-7	breast:
18	chr22:31684965..31688899-chr22:31705650..31709359,6	MCF-7	breast:
19	chr22:31722169..31724178-chr22:31726123..31728271,2	MCF-7	breast:
20	chr22:31685375..31688611-chr22:31722629..31725429,4	MCF-7	breast:
21	chr22:31707565..31712483-chr22:31737116..31742544,8	MCF-7	breast:
22	chr22:31739363..31741917-chr22:31884740..31886779,4	MCF-7	breast:
23	chr22:31707932..31710940-chr22:31717264..31720146,3	MCF-7	breast:
24	chr22:31686050..31689406-chr22:31717543..31719955,3	MCF-7	breast:
25	chr22:31478095..31480171-chr22:31731632..31733527,2	K562	blood:
26	chr22:31707982..31709625-chr22:31739101..31740843,2	MCF-7	breast:
27	chr22:31722952..31725262-chr22:31725598..31728239,2	K562	blood:
28	chr22:31683915..31694680-chr22:31733392..31744713,34	MCF-7	breast:
29	chr22:31735875..31738019-chr22:32032337..32033886,2	MCF-7	breast:
30	chr22:31668479..31670467-chr22:31707850..31710837,2	MCF-7	breast:
31	chr22:31719691..31721873-chr22:31722366..31726598,4	K562	blood:
32	chr22:31736945..31739713-chr22:32022907..32024552,2	MCF-7	breast:
33	chr22:31716552..31720411-chr22:31737188..31740902,8	MCF-7	breast:
34	chr22:31646685..31649420-chr22:31724397..31725968,2	MCF-7	breast:
35	chr22:31722952..31725262-chr22:31725598..31728239,2	K562	blood:
36	chr22:31688219..31688930-chr22:31709001..31709570,2	MCF-7	breast:
37	chr22:31736345..31738425-chr22:31795224..31798140,2	K562	blood:
38	chr22:31706292..31708029-chr22:31741316..31744278,3	MCF-7	breast:
39	chr22:31741801..31743589-chr22:31885070..31888024,2	K562	blood:
40	chr22:31709484..31711779-chr22:31717632..31720402,2	MCF-7	breast:
41	chr22:31709668..31711529-chr22:31730640..31732953,2	MCF-7	breast:
42	chr22:31740767..31742486-chr9:131903487..131906077,2	MCF-7	breast:
43	chr22:31737150..31739439-chr22:31822511..31824172,2	MCF-7	breast:
44	chr22:31700681..31703376-chr22:31737373..31738951,2	K562	blood:
45	chr22:31738670..31747056-chr22:31790500..31799012,36	MCF-7	breast:
46	chr22:31686966..31689242-chr22:31718785..31721540,3	MCF-7	breast:
47	chr22:31717116..31718707-chr22:31727268..31729171,2	MCF-7	breast:
48	chr2:27545885..27546452-chr22:31741459..31742305,2	Hela-S3	cervix:
49	chr22:31741223..31743821-chr22:31744774..31746588,4	K562	blood:
50	chr22:31693951..31696638-chr22:31709561..31711095,2	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PIK3IP1-1	chr22:31736663-31737669	NONHSAT084880
2	lnc-PIK3IP1-1	chr22:31738883-31739577	NONHSAT084880
3	lnc-LIMK2-2	chr22:31705176-31706049	NONHSAT084875
4	lnc-LIMK2-2	chr22:31703844-31705019	NONHSAT084875
5	lnc-AC005003.1-1	chr22:31733654-31734007	ENSG00000228839.1
6	lnc-AC005003.1-1	chr22:31731335-31731402	ENSG00000228839.1
7	lnc-AC005003.1-1	chr22:31733654-31734007	ENSG00000228839.1

No data

Variant related genes	Relation type
ENSG00000213888	TF binding region
PATZ1	TF binding region
ENSG00000228839	TF binding region
ENSG00000213888	CpG island
PATZ1	CpG island
ENSG00000228839	CpG island
ENSG00000273387	chromatin interactions
ENSG00000263931	chromatin interactions
ENSG00000122986	chromatin interactions
ENSG00000185721	chromatin interactions
ENSG00000128245	chromatin interactions
ENSG00000183963	chromatin interactions
ENSG00000119383	chromatin interactions
ENSG00000161203	chromatin interactions
ENSG00000133639	chromatin interactions
ENSG00000100100	chromatin interactions
ENSG00000100105	chromatin interactions
ENSG00000137309	chromatin interactions
ENSG00000241878	chromatin interactions
ENSG00000128254	chromatin interactions
ENSG00000128016	chromatin interactions
ENSG00000168209	chromatin interactions
ENSG00000153487	chromatin interactions
ENSG00000182541	chromatin interactions
ENSG00000115204	chromatin interactions
ENSG00000198089	chromatin interactions
ENSG00000136938	chromatin interactions
ENSG00000184708	chromatin interactions
ENSG00000212542	chromatin interactions
ENSG00000228839	chromatin interactions
ENSG00000213888	chromatin interactions
ENSG00000100983	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000245904	chromatin interactions

Extended variants
information (count: 1859 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:1859 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs397831839	chr22:31704958-31704959	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
2	rs555796292	chr22:31704963-31704964	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
3	rs186829359	chr22:31704981-31704982	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
4	rs556010154	chr22:31705044-31705045	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs575876458	chr22:31705098-31705099	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs191705896	chr22:31705141-31705142	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs558411740	chr22:31705158-31705159	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs574351910	chr22:31705278-31705279	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
9	rs397868189	chr22:31705390-31705391	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
10	rs576806975	chr22:31705395-31705396	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
11	rs183515900	chr22:31705436-31705437	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
12	rs537310029	chr22:31705472-31705473	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
13	rs5753556	chr22:31705490-31705491	Weak transcription Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs577257277	chr22:31705515-31705516	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
15	rs541392810	chr22:31705659-31705660	Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
16	rs138580746	chr22:31705675-31705676	Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
17	rs559043070	chr22:31705685-31705686	Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
18	rs572615746	chr22:31705709-31705710	Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
19	rs564370607	chr22:31705751-31705752	Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
20	rs577626564	chr22:31705785-31705786	Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
21	rs5753557	chr22:31705864-31705865	Weak transcription Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
22	rs9609254	chr22:31705942-31705943	Weak transcription Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs12169137	chr22:31706008-31706009	Weak transcription Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
24	rs12169141	chr22:31706012-31706013	Weak transcription Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
25	rs141221062	chr22:31706039-31706040	Weak transcription Strong transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
26	rs150330131	chr22:31706071-31706072	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs34690197	chr22:31706079-31706080	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs186739302	chr22:31706175-31706176	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs533032095	chr22:31706186-31706187	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs546981604	chr22:31706189-31706190	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs566836241	chr22:31706194-31706195	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs548827688	chr22:31706233-31706234	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs111673984	chr22:31706235-31706236	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs529412807	chr22:31706242-31706243	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs549475987	chr22:31706263-31706264	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs185697296	chr22:31706272-31706273	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs36036843	chr22:31706291-31706292	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs569504066	chr22:31706339-31706340	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs138017646	chr22:31706376-31706377	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs149513197	chr22:31706383-31706384	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs578201365	chr22:31706384-31706385	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs549349324	chr22:31706388-31706389	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs534189408	chr22:31706428-31706429	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs552564906	chr22:31706437-31706438	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs76251739	chr22:31706535-31706536	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs35873638	chr22:31706536-31706537	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs397868121	chr22:31706538-31706539	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs74520449	chr22:31706540-31706541	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs34316486	chr22:31706559-31706560	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs367963642	chr22:31706634-31706635	Weak transcription Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Velocardiofacial syndrome	20111667	CNVD
Medulloblastoma	21979893	CNVD
sporadic solitary meningiomas	19589153	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Congenital heart defect	22511896	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Seminomas	18059402	CNVD
Cancer	16751803	CNVD
Metanephric adenoma	20802469	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Metachromatic leukodystrophy	18421352	CNVD
Basal cell lymphoma	17170743	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Breast cancer	21858162	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	16608533	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	22174824	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Wilms tumour	21544195	CNVD
Acute myeloid leukemia	21251322	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Lung cancer	18438408	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
small cell lung cancer	20016488	CNVD
Cancer	21183584	CNVD
Renal cell carcinoma	18765545	CNVD
Schizophrenia	19521646	CNVD
Schizophrenia	18990708	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Hepatocellular carcinoma	16750200	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	17322880	CNVD
Breast cancer	20409316	CNVD
Neurofibromatosis type 2	19566914	CNVD
Autism	19384346	CNVD
Myelofibrosis	22110671	CNVD
muscular dystrophy type 1D	21248746	CNVD
Leukoplakia	24403051	CNVD
Ovarian neoplasms	16753589	CNVD
Pancreatic cancer	17952125	CNVD
Amyotrophic lateral sclerosis	20858604	CNVD
Breast cancer	22522925	CNVD
Breast cancer	17142309	CNVD
Autism	22543975	CNVD

Chromatin state (count:1800 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31689400-31709000	Weak transcription	Placenta	Placenta
2	chr22:31692600-31709200	Weak transcription	Stomach Mucosa	stomach
3	chr22:31693400-31709200	Weak transcription	Rectal Smooth Muscle	rectum
4	chr22:31693800-31720000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr22:31697000-31709400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr22:31698000-31709200	Weak transcription	Adipose Nuclei	Adipose
7	chr22:31698400-31709200	Weak transcription	Fetal Intestine Small	intestine
8	chr22:31702000-31705400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr22:31702200-31709400	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr22:31702400-31705200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
11	chr22:31702400-31705600	Enhancers	Primary T helper cells fromperipheralblood	blood
12	chr22:31702600-31705000	Enhancers	Primary T helper naive cells from peripheral blood	blood
13	chr22:31703000-31705600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
14	chr22:31703000-31705600	Enhancers	Primary T killer memory cells from peripheral blood	blood
15	chr22:31703000-31709200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr22:31703200-31706400	Weak transcription	Primary T cells fromperipheralblood	blood
17	chr22:31704000-31705000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr22:31704200-31709200	Weak transcription	Stomach Smooth Muscle	stomach
19	chr22:31704800-31708800	Weak transcription	Primary T helper cells PMA-I stimulated	--
20	chr22:31704800-31709000	Weak transcription	Primary T cells from cord blood	blood
21	chr22:31704800-31709000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
22	chr22:31704800-31709200	Weak transcription	Primary B cells from peripheral blood	blood
23	chr22:31704800-31711400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chr22:31704800-31711600	Weak transcription	Primary B cells from cord blood	blood
25	chr22:31704800-31720200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
26	chr22:31705000-31708800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
27	chr22:31705000-31709000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
28	chr22:31705200-31705600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr22:31705400-31707600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
30	chr22:31705600-31705800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
31	chr22:31705600-31706200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr22:31705600-31709000	Weak transcription	Primary T helper cells fromperipheralblood	blood
33	chr22:31705600-31709000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
34	chr22:31705800-31709000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
35	chr22:31706200-31709200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
36	chr22:31706200-31721000	Weak transcription	HSMMtube	muscle
37	chr22:31706400-31708200	Strong transcription	Primary T cells fromperipheralblood	blood
38	chr22:31707600-31708400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
39	chr22:31708200-31708600	Weak transcription	Primary T cells fromperipheralblood	blood
40	chr22:31708400-31708800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
41	chr22:31708600-31709800	Enhancers	Primary T cells fromperipheralblood	blood
42	chr22:31708800-31709800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
43	chr22:31708800-31709800	Enhancers	Primary T helper naive cells from peripheral blood	blood
44	chr22:31708800-31710000	Enhancers	Primary T helper cells PMA-I stimulated	--
45	chr22:31708800-31711000	Enhancers	Breast Myoepithelial Primary Cells	Breast
46	chr22:31708800-31721400	Weak transcription	Ovary	ovary
47	chr22:31709000-31709200	Enhancers	Primary T cells from cord blood	blood
48	chr22:31709000-31709400	Weak transcription	HSMM	muscle
49	chr22:31709000-31709600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
50	chr22:31709000-31709600	Enhancers	Primary T killer memory cells from peripheral blood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links