Variant report

Variant	esv3341496
Chromosome Location	chr6:34663774-34665822
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:479)
CpG islands
(count:550)
Chromatin interactive
region (count:21)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:479 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:34664800-34665428	K562	blood:	n/a	n/a
2	ARID3A	chr6:34664598-34665247	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:34665665-34666071	K562	blood:	n/a	n/a
4	ATF1	chr6:34664551-34665370	K562	blood:	n/a	chr6:34664738-34664752
5	ATF1	chr6:34665710-34666066	K562	blood:	n/a	n/a
6	ATF2	chr6:34664580-34664909	H1-hESC	embryonic stem cell:	n/a	chr6:34664738-34664752
7	ATF2	chr6:34664580-34664940	H1-hESC	embryonic stem cell:	n/a	chr6:34664738-34664752
8	ATF2	chr6:34664567-34665160	GM12878	blood:	n/a	chr6:34664738-34664752
9	ATF2	chr6:34664633-34665178	GM12878	blood:	n/a	chr6:34664738-34664752
10	ATF3	chr6:34665657-34666102	K562	blood:	n/a	n/a
11	BACH1	chr6:34664749-34664975	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr6:34665701-34665768	K562	blood:	n/a	n/a
13	BATF	chr6:34665787-34665995	GM12878	blood:	n/a	chr6:34665889-34665900
14	BCL3	chr6:34664626-34665041	A549	lung:	n/a	chr6:34664876-34664889 chr6:34664808-34664817
15	BCLAF1	chr6:34664612-34665078	GM12878	blood:	n/a	chr6:34664876-34664889 chr6:34664808-34664817
16	BHLHE40	chr6:34664331-34664366	GM12878	blood:	n/a	n/a
17	BHLHE40	chr6:34664577-34665108	GM12878	blood:	n/a	n/a
18	BHLHE40	chr6:34664221-34665410	K562	blood:	n/a	n/a
19	BHLHE40	chr6:34664569-34664909	HepG2	liver:	n/a	n/a
20	BRCA1	chr6:34664433-34664441	HepG2	liver:	n/a	n/a
21	BRCA1	chr6:34664585-34665261	Hela-S3	cervix:	n/a	n/a
22	BRCA1	chr6:34664638-34664888	H1-hESC	embryonic stem cell:	n/a	n/a
23	BRCA1	chr6:34664299-34664380	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr6:34664697-34664897	HepG2	liver:	n/a	n/a
25	CBX3	chr6:34664354-34665410	K562	blood:	n/a	n/a
26	CBX3	chr6:34665415-34666102	K562	blood:	n/a	n/a
27	CCNT2	chr6:34664058-34665253	K562	blood:	n/a	chr6:34664807-34664816
28	CEBPB	chr6:34664135-34664288	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr6:34664601-34665305	A549	lung:	n/a	chr6:34665129-34665140
30	CEBPB	chr6:34664560-34665338	K562	blood:	n/a	chr6:34665129-34665140
31	CEBPB	chr6:34664588-34665293	MCF-7	breast:	n/a	chr6:34665129-34665140
32	CEBPB	chr6:34665761-34666038	K562	blood:	n/a	n/a
33	CEBPB	chr6:34664611-34664824	HepG2	liver:	n/a	n/a
34	CEBPB	chr6:34664569-34665432	K562	blood:	n/a	chr6:34665129-34665140
35	CEBPB	chr6:34664623-34665447	A549	lung:	n/a	chr6:34665129-34665140
36	CEBPB	chr6:34664565-34665304	HepG2	liver:	n/a	chr6:34665129-34665140
37	CEBPB	chr6:34664749-34665126	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr6:34664552-34665278	Hela-S3	cervix:	n/a	chr6:34665129-34665140
39	CEBPB	chr6:34664600-34665289	IMR90	lung:	n/a	chr6:34665129-34665140
40	CEBPD	chr6:34664242-34664904	HepG2	liver:	n/a	n/a
41	CEBPD	chr6:34664273-34665366	K562	blood:	n/a	n/a
42	CHD1	chr6:34663933-34665164	GM12878	blood:	n/a	n/a
43	CHD1	chr6:34662884-34665377	IMR90	lung:	n/a	n/a
44	CHD2	chr6:34664578-34665300	K562	blood:	n/a	n/a
45	CHD2	chr6:34664271-34664310	K562	blood:	n/a	n/a
46	CHD2	chr6:34664290-34664478	HepG2	liver:	n/a	n/a
47	CHD2	chr6:34664700-34664886	HepG2	liver:	n/a	n/a
48	CHD2	chr6:34664670-34664928	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD2	chr6:34664248-34665236	GM12878	blood:	n/a	n/a
50	CHD2	chr6:34664068-34664966	Hela-S3	cervix:	n/a	n/a

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:34664699-34664749	HCPEpiC	choroid plexus:	n/a
2	chr6:34664699-34664749	HCPEpiC	choroid plexus:	n/a
3	chr6:34665034-34665084	NHBE	bronchial:	n/a
4	chr6:34665156-34665206	AG10803	skin:	n/a
5	chr6:34664215-34664265	GM12891	blood:	n/a
6	chr6:34664215-34664265	GM12878	blood:	n/a
7	chr6:34664305-34664355	HRE	kidney:	n/a
8	chr6:34664305-34664355	NB4	blood:	n/a
9	chr6:34664488-34664538	Hepatocyte	liver:	n/a
10	chr6:34665156-34665206	NHDF-neo	bronchial:	n/a
11	chr6:34664215-34664265	T-47D	breast:	n/a
12	chr6:34664887-34664937	K562	blood:	n/a
13	chr6:34665156-34665206	LNCaP	prostate:	n/a
14	chr6:34664215-34664265	SK-N-SH	brain:	n/a
15	chr6:34664215-34664265	HEEpiC	esophagus:	n/a
16	chr6:34664215-34664265	ECC-1	luminal epithelium:	n/a
17	chr6:34665034-34665084	BJ	skin:	n/a
18	chr6:34664215-34664265	ProgFib	skin:	n/a
19	chr6:34665156-34665206	HMEC	breast:	n/a
20	chr6:34664215-34664265	SK-N-SH_RA	brain:	n/a
21	chr6:34664215-34664265	SAEC	small airway:	n/a
22	chr6:34665156-34665206	HCM	heart:	n/a
23	chr6:34665156-34665206	HepG2	liver:	n/a
24	chr6:34665156-34665206	SK-N-SH_RA	brain:	n/a
25	chr6:34665034-34665084	NB4	blood:	n/a
26	chr6:34664305-34664355	AG04449	skin:	fetal
27	chr6:34664488-34664538	SAEC	small airway:	n/a
28	chr6:34664812-34664862	PFSK-1	brain:	n/a
29	chr6:34664812-34664862	HRCEpiC	kidney:	n/a
30	chr6:34665156-34665206	HAEpiC	amniotic membrane:	n/a
31	chr6:34664887-34664937	HL-60	blood:	n/a
32	chr6:34665156-34665206	HL-60	blood:	n/a
33	chr6:34664812-34664862	HIPEpiC	eye:	n/a
34	chr6:34664488-34664538	ECC-1	luminal epithelium:	n/a
35	chr6:34664488-34664538	HUVEC	blood vessel:	n/a
36	chr6:34664215-34664265	AoSMC	blood vessel:	n/a
37	chr6:34664703-34664753	SKMC	muscle:	n/a
38	chr6:34664215-34664265	HL-60	blood:	n/a
39	chr6:34664812-34664862	H1-hESC	embryonic stem cell:	embryo
40	chr6:34665034-34665084	Jurkat	blood:	n/a
41	chr6:34664699-34664749	LNCaP	prostate:	n/a
42	chr6:34664215-34664265	H1-hESC	embryonic stem cell:	embryo
43	chr6:34665156-34665206	AG04449	skin:	fetal
44	chr6:34665034-34665084	HL-60	blood:	n/a
45	chr6:34664887-34664937	HRPEpiC	eye:	n/a
46	chr6:34664812-34664862	A549	lung:	n/a
47	chr6:34664812-34664862	NHBE	bronchial:	n/a
48	chr6:34664703-34664753	MCF-7	breast:	n/a
49	chr6:34664305-34664355	SK-N-SH_RA	brain:	n/a
50	chr6:34664703-34664753	T-47D	breast:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:34663247..34666328-chr6:34722695..34726583,8	K562	blood:
2	chr6:34662895..34664989-chr6:34725317..34726977,2	MCF-7	breast:
3	chr6:34663461..34666396-chr6:34758437..34761219,3	K562	blood:
4	chr6:34664585..34666258-chr6:34723626..34725241,2	MCF-7	breast:
5	chr6:34653279..34655876-chr6:34663256..34664778,2	MCF-7	breast:
6	chr6:34664965..34667279-chr6:34675934..34678672,3	K562	blood:
7	chr6:34659775..34661894-chr6:34663558..34666240,3	K562	blood:
8	chr6:34392408..34394621-chr6:34663502..34666102,2	K562	blood:
9	chr11:65624341..65625267-chr6:34664302..34664857,2	Hela-S3	cervix:
10	chr6:34665467..34667075-chr6:34685677..34688380,2	K562	blood:
11	chr6:34649586..34652220-chr6:34663564..34665833,2	MCF-7	breast:
12	chr6:34662430..34663990-chr6:34776772..34779550,2	MCF-7	breast:
13	chr6:34660360..34662631-chr6:34662736..34665398,3	K562	blood:
14	chr6:34663247..34666234-chr6:34723415..34727175,3	K562	blood:
15	chr6:34662945..34666396-chr6:34758284..34762755,7	K562	blood:
16	chr6:34433144..34435297-chr6:34663197..34665594,2	MCF-7	breast:
17	chr6:34657528..34660560-chr6:34662754..34664755,3	MCF-7	breast:
18	chr6:34664734..34666755-chr6:34668036..34669637,2	K562	blood:
19	chr6:34663907..34669185-chr6:34723600..34728462,6	MCF-7	breast:
20	chr6:34584121..34585997-chr6:34662703..34665284,2	K562	blood:
21	chr6:34665132..34667717-chr6:34706629..34708944,2	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SNRPC-2	chr6:34664722-34664774	ENSG00000272288.1
2	lnc-SNRPC-2	chr6:34664723-34664774	NONHSAT112145
3	lnc-SNRPC-2	chr6:34664936-34665339	NONHSAT112145
4	lnc-SNRPC-2	chr6:34664094-34664499	ENSG00000272288.1
5	lnc-SNRPC-2	chr6:34664936-34665247	ENSG00000272288.1
6	lnc-SNRPC-2	chr6:34664936-34665247	ENSG00000272288.1

No data

Variant related genes	Relation type
C6orf106	TF binding region
ENSG00000272288	TF binding region
C6orf106	CpG island
ENSG00000272288	CpG island
ENSG00000172757	chromatin interactions
ENSG00000216636	chromatin interactions
ENSG00000270800	chromatin interactions
ENSG00000265123	chromatin interactions
ENSG00000124562	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000238484	chromatin interactions
ENSG00000124507	chromatin interactions
ENSG00000220643	chromatin interactions
ENSG00000124614	chromatin interactions
ENSG00000239059	chromatin interactions
ENSG00000065060	chromatin interactions

Extended variants
information (count: 68 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:68 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs184733905	chr6:34663807-34663808	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
2	rs563059815	chr6:34663827-34663828	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
3	rs552732003	chr6:34663909-34663910	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
4	rs540505471	chr6:34663910-34663911	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
5	rs115212107	chr6:34663941-34663942	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
6	rs552027576	chr6:34663953-34663954	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
7	rs559949984	chr6:34663987-34663988	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
8	rs527420754	chr6:34664002-34664003	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
9	rs548695129	chr6:34664007-34664008	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
10	rs369103489	chr6:34664182-34664183	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
11	rs369663745	chr6:34664196-34664197	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
12	rs3800456	chr6:34664207-34664208	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
13	rs549630397	chr6:34664213-34664214	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
14	rs571228442	chr6:34664214-34664215	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
15	rs369638409	chr6:34664262-34664263	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
16	rs368472740	chr6:34664276-34664277	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	11 gene(s)	Overlapped CNVs	n/a
17	rs144020715	chr6:34664345-34664346	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
18	rs375296741	chr6:34664351-34664352	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
19	rs367859471	chr6:34664384-34664385	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
20	rs553942931	chr6:34664385-34664386	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
21	rs199639805	chr6:34664405-34664406	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
22	rs534349264	chr6:34664430-34664431	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
23	rs555454118	chr6:34664449-34664450	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
24	rs574119669	chr6:34664527-34664528	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
25	rs544636437	chr6:34664566-34664567	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
26	rs556869374	chr6:34664568-34664569	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
27	rs11758893	chr6:34664617-34664618	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
28	rs528082401	chr6:34664631-34664632	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
29	rs568394512	chr6:34664641-34664642	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
30	rs578251447	chr6:34664651-34664652	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
31	rs545260076	chr6:34664738-34664739	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
32	rs560783560	chr6:34664751-34664752	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
33	rs140595910	chr6:34664758-34664759	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	Overlapped CNVs	n/a
34	rs80222510	chr6:34664806-34664807	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
35	rs541473030	chr6:34664847-34664848	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
36	rs531179895	chr6:34664888-34664889	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
37	rs549367597	chr6:34664898-34664899	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
38	rs375763814	chr6:34664918-34664919	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
39	rs571169499	chr6:34664977-34664978	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
40	rs561791803	chr6:34664992-34664993	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
41	rs187907111	chr6:34665025-34665026	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
42	rs543045568	chr6:34665040-34665041	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
43	rs547272070	chr6:34665059-34665060	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
44	rs565895618	chr6:34665111-34665112	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
45	rs530647269	chr6:34665212-34665213	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
46	rs534022426	chr6:34665225-34665226	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	Overlapped CNVs	n/a
47	rs75403364	chr6:34665325-34665326	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
48	rs550725554	chr6:34665332-34665333	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	8 gene(s)	Overlapped CNVs	n/a
49	rs192470677	chr6:34665368-34665369	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
50	rs147712246	chr6:34665393-34665394	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:313 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34659800-34665600	Active TSS	GM12878-XiMat	blood
2	chr6:34661600-34663800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
3	chr6:34661600-34663800	Enhancers	Spleen	Spleen
4	chr6:34662200-34664000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
5	chr6:34662200-34664000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
6	chr6:34662200-34665400	Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr6:34662400-34663800	Flanking Active TSS	Duodenum Mucosa	Duodenum
8	chr6:34662600-34663800	Flanking Active TSS	Rectal Smooth Muscle	rectum
9	chr6:34662600-34664200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr6:34662600-34665400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr6:34662800-34663800	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr6:34662800-34663800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
13	chr6:34662800-34663800	Flanking Active TSS	Liver	Liver
14	chr6:34662800-34663800	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
15	chr6:34662800-34663800	Flanking Active TSS	Fetal Stomach	stomach
16	chr6:34662800-34663800	Flanking Active TSS	Fetal Thymus	thymus
17	chr6:34662800-34664000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr6:34662800-34664000	Flanking Active TSS	Primary T cells from cord blood	blood
19	chr6:34662800-34664000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
20	chr6:34662800-34664000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
21	chr6:34662800-34664000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr6:34662800-34664000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr6:34662800-34664000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
24	chr6:34662800-34664000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr6:34662800-34664000	Flanking Active TSS	Adipose Nuclei	Adipose
26	chr6:34662800-34664000	Flanking Active TSS	Brain Anterior Caudate	brain
27	chr6:34662800-34664000	Flanking Active TSS	Brain Germinal Matrix	brain
28	chr6:34662800-34664000	Flanking Active TSS	Brain Hippocampus Middle	brain
29	chr6:34662800-34664000	Flanking Active TSS	Brain Substantia Nigra	brain
30	chr6:34662800-34664000	Flanking Active TSS	Fetal Muscle Leg	muscle
31	chr6:34662800-34664000	Flanking Active TSS	HUVEC	blood vessel
32	chr6:34662800-34664200	Flanking Active TSS	Primary hematopoietic stem cells	blood
33	chr6:34662800-34664200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
34	chr6:34662800-34664200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
35	chr6:34662800-34664200	Active TSS	Right Atrium	heart
36	chr6:34662800-34664200	Flanking Active TSS	Dnd41	blood
37	chr6:34662800-34664200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
38	chr6:34662800-34665200	Active TSS	Aorta	Aorta
39	chr6:34662800-34665200	Active TSS	Esophagus	oesophagus
40	chr6:34662800-34665200	Active TSS	Fetal Muscle Trunk	muscle
41	chr6:34662800-34665400	Active TSS	ES-I3 Cell Line	embryonic stem cell
42	chr6:34662800-34665400	Active TSS	HSMMtube	muscle
43	chr6:34662800-34665600	Active TSS	Rectal Mucosa Donor 29	rectum
44	chr6:34663000-34663800	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
45	chr6:34663000-34663800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
46	chr6:34663000-34663800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
47	chr6:34663000-34663800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
48	chr6:34663000-34663800	Flanking Active TSS	Fetal Lung	lung
49	chr6:34663000-34663800	Flanking Active TSS	NH-A	brain
50	chr6:34663000-34664000	Flanking Active TSS	Primary B cells from peripheral blood	blood

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