Variant report

Variant esv3343462
Chromosome Location chr20:13974977-13977925
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:306 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13971600-13975200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr20:13971800-13975400 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr20:13972000-13975400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr20:13973800-13975600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr20:13974000-13976000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
6 chr20:13974600-13975200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr20:13975200-13975400 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
8 chr20:13975200-13975400 Enhancers Adipose Nuclei Adipose
9 chr20:13975200-13975400 Enhancers Stomach Mucosa stomach
10 chr20:13975200-13975400 Enhancers HMEC breast
11 chr20:13975200-13975800 ZNF genes & repeats Primary hematopoietic stem cells blood
12 chr20:13975200-13976600 Active TSS ES-I3 Cell Line embryonic stem cell
13 chr20:13975200-13976600 Active TSS iPS-18 Cell Line embryonic stem cell
14 chr20:13975200-13976800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr20:13975200-13976800 Active TSS HUES64 Cell Line embryonic stem cell
16 chr20:13975200-13977000 Active TSS Psoas Muscle Psoas
17 chr20:13975200-13977400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr20:13975200-13977600 Active TSS Duodenum Smooth Muscle Duodenum
19 chr20:13975200-13978000 Active TSS Pancreatic Islets Pancreatic Islet
20 chr20:13975400-13975600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr20:13975400-13975600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr20:13975400-13975600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
23 chr20:13975400-13975600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr20:13975400-13975600 ZNF genes & repeats Brain Inferior Temporal Lobe brain
25 chr20:13975400-13975600 Enhancers Esophagus oesophagus
26 chr20:13975400-13975600 ZNF genes & repeats Fetal Intestine Small intestine
27 chr20:13975400-13975600 Active TSS Skeletal Muscle Female skeletal muscle
28 chr20:13975400-13975600 Bivalent/Poised TSS Monocytes-CD14+_RO01746 blood
29 chr20:13975400-13975600 Active TSS NH-A brain
30 chr20:13975400-13975800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
31 chr20:13975400-13975800 Flanking Active TSS Stomach Mucosa stomach
32 chr20:13975400-13975800 Flanking Active TSS HMEC breast
33 chr20:13975400-13976000 Flanking Active TSS Adipose Nuclei Adipose
34 chr20:13975400-13976200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr20:13975400-13976400 Active TSS H1 Cell Line embryonic stem cell
36 chr20:13975400-13976600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr20:13975400-13976600 Active TSS HUES48 Cell Line embryonic stem cell
38 chr20:13975400-13976600 Active TSS HUES6 Cell Line embryonic stem cell
39 chr20:13975400-13976600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
40 chr20:13975400-13976600 Active TSS Fetal Brain Female brain
41 chr20:13975400-13976800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr20:13975400-13976800 Active TSS iPS-15b Cell Line embryonic stem cell
43 chr20:13975400-13976800 Active TSS Brain Cingulate Gyrus brain
44 chr20:13975400-13976800 Active TSS Skeletal Muscle Male skeletal muscle
45 chr20:13975400-13976800 Active TSS A549 lung
46 chr20:13975400-13976800 Active TSS NHEK skin
47 chr20:13975400-13977000 Active TSS ES-WA7 Cell Line embryonic stem cell
48 chr20:13975400-13977000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr20:13975400-13977000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
50 chr20:13975400-13977000 Active TSS ES-UCSF4 Cell Line embryonic stem cell

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