Variant report

Variant rs2295413
Chromosome Location chr20:13975789-13975790
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13974000-13976000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
2 chr20:13975200-13975800 ZNF genes & repeats Primary hematopoietic stem cells blood
3 chr20:13975200-13976600 Active TSS ES-I3 Cell Line embryonic stem cell
4 chr20:13975200-13976600 Active TSS iPS-18 Cell Line embryonic stem cell
5 chr20:13975200-13976800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr20:13975200-13976800 Active TSS HUES64 Cell Line embryonic stem cell
7 chr20:13975200-13977000 Active TSS Psoas Muscle Psoas
8 chr20:13975200-13977400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr20:13975200-13977600 Active TSS Duodenum Smooth Muscle Duodenum
10 chr20:13975200-13978000 Active TSS Pancreatic Islets Pancreatic Islet
11 chr20:13975400-13975800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
12 chr20:13975400-13975800 Flanking Active TSS Stomach Mucosa stomach
13 chr20:13975400-13975800 Flanking Active TSS HMEC breast
14 chr20:13975400-13976000 Flanking Active TSS Adipose Nuclei Adipose
15 chr20:13975400-13976200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr20:13975400-13976400 Active TSS H1 Cell Line embryonic stem cell
17 chr20:13975400-13976600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr20:13975400-13976600 Active TSS HUES48 Cell Line embryonic stem cell
19 chr20:13975400-13976600 Active TSS HUES6 Cell Line embryonic stem cell
20 chr20:13975400-13976600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
21 chr20:13975400-13976600 Active TSS Fetal Brain Female brain
22 chr20:13975400-13976800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr20:13975400-13976800 Active TSS iPS-15b Cell Line embryonic stem cell
24 chr20:13975400-13976800 Active TSS Brain Cingulate Gyrus brain
25 chr20:13975400-13976800 Active TSS Skeletal Muscle Male skeletal muscle
26 chr20:13975400-13976800 Active TSS A549 lung
27 chr20:13975400-13976800 Active TSS NHEK skin
28 chr20:13975400-13977000 Active TSS ES-WA7 Cell Line embryonic stem cell
29 chr20:13975400-13977000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr20:13975400-13977000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
31 chr20:13975400-13977000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
32 chr20:13975400-13977000 Active TSS Breast Myoepithelial Primary Cells Breast
33 chr20:13975400-13977000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr20:13975400-13977000 Active TSS Muscle Satellite Cultured Cells --
35 chr20:13975400-13977000 Active TSS Liver Liver
36 chr20:13975400-13977000 Active TSS Brain Angular Gyrus brain
37 chr20:13975400-13977000 Active TSS Brain Anterior Caudate brain
38 chr20:13975400-13977000 Active TSS Colon Smooth Muscle Colon
39 chr20:13975400-13977000 Active TSS Fetal Lung lung
40 chr20:13975400-13977000 Active TSS Rectal Mucosa Donor 29 rectum
41 chr20:13975400-13977000 Bivalent/Poised TSS Thymus Thymus
42 chr20:13975400-13977200 Active TSS Aorta Aorta
43 chr20:13975400-13977200 Active TSS Brain Hippocampus Middle brain
44 chr20:13975400-13977200 Active TSS Fetal Intestine Large intestine
45 chr20:13975400-13977200 Active TSS Fetal Kidney kidney
46 chr20:13975400-13977200 Active TSS Ovary ovary
47 chr20:13975400-13977200 Active TSS Rectal Mucosa Donor 31 rectum
48 chr20:13975400-13977200 Active TSS Rectal Smooth Muscle rectum
49 chr20:13975400-13977200 Active TSS Hela-S3 cervix
50 chr20:13975400-13977200 Active TSS HSMMtube muscle

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