Variant report

Variant esv3344055
Chromosome Location chr1:175873040-175887908
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:190 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175855200-175879400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:175855400-175879400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:175857200-175875800 Weak transcription Brain Germinal Matrix brain
4 chr1:175857600-175879400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:175858200-175879400 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:175858800-175876800 Weak transcription HSMM muscle
7 chr1:175858800-175879400 Weak transcription Fetal Muscle Trunk muscle
8 chr1:175858800-175879400 Weak transcription HSMMtube muscle
9 chr1:175859200-175879400 Weak transcription Fetal Muscle Leg muscle
10 chr1:175862400-175879400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:175863200-175906400 Weak transcription Muscle Satellite Cultured Cells --
12 chr1:175863400-175879400 Weak transcription Primary T cells from cord blood blood
13 chr1:175864800-175878000 Weak transcription Fetal Brain Female brain
14 chr1:175865200-175879400 Weak transcription Fetal Lung lung
15 chr1:175865400-175879400 Weak transcription Fetal Stomach stomach
16 chr1:175866600-175876200 Weak transcription Ovary ovary
17 chr1:175868200-175877000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:175869600-175879400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:175870000-175873200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:175870000-175879400 Weak transcription Duodenum Mucosa Duodenum
21 chr1:175870200-175879400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr1:175870600-175874400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:175871400-175878400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:175871400-175879600 Weak transcription Psoas Muscle Psoas
25 chr1:175871600-175875000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:175871800-175879400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:175871800-175879400 Weak transcription Aorta Aorta
28 chr1:175871800-175879400 Weak transcription Pancreas Pancrea
29 chr1:175872000-175876800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:175872400-175873400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:175872400-175874000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:175872600-175873400 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
33 chr1:175872800-175879400 Weak transcription Left Ventricle heart
34 chr1:175873000-175873200 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
35 chr1:175873200-175873400 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
36 chr1:175873200-175875000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:175873400-175875000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:175873800-175874000 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
39 chr1:175874000-175874400 Bivalent Enhancer H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr1:175874000-175879400 Weak transcription Lung lung
41 chr1:175874400-175876200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:175874400-175945600 Weak transcription A549 lung
43 chr1:175874600-175874800 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
44 chr1:175874800-175875000 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
45 chr1:175874800-175875000 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
46 chr1:175875000-175875400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:175875000-175876600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:175875000-175882800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:175875400-175875800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:175875600-175875800 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell

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