Variant report

Variant	esv3356841
Chromosome Location	chr3:49758498-49761296
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:543)
CpG islands
(count:427)
Chromatin interactive
region (count:16)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:543 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr3:49761210-49761863	K562	blood:	n/a	n/a
2	ATF2	chr3:49760632-49761907	H1-hESC	embryonic stem cell:	n/a	chr3:49761099-49761113
3	ATF2	chr3:49760749-49761717	GM12878	blood:	n/a	chr3:49761099-49761113
4	ATF3	chr3:49760789-49760976	K562	blood:	n/a	n/a
5	ATF3	chr3:49761204-49761550	H1-hESC	embryonic stem cell:	n/a	chr3:49761395-49761415 chr3:49761406-49761426 chr3:49761395-49761404
6	ATF3	chr3:49760689-49761095	GM12878	blood:	n/a	n/a
7	ATF3	chr3:49761172-49761682	K562	blood:	n/a	chr3:49761395-49761415 chr3:49761406-49761426 chr3:49761395-49761404
8	ATF3	chr3:49761157-49761640	H1-hESC	embryonic stem cell:	n/a	chr3:49761395-49761415 chr3:49761406-49761426 chr3:49761395-49761404
9	BCL3	chr3:49761145-49761925	A549	lung:	n/a	n/a
10	BCL3	chr3:49761148-49761881	A549	lung:	n/a	n/a
11	BCL3	chr3:49758158-49758662	A549	lung:	n/a	n/a
12	BCL3	chr3:49761022-49761872	GM12878	blood:	n/a	n/a
13	BCL3	chr3:49761098-49761642	K562	blood:	n/a	n/a
14	BCLAF1	chr3:49761142-49761858	GM12878	blood:	n/a	n/a
15	BHLHE40	chr3:49760721-49760921	K562	blood:	n/a	n/a
16	BHLHE40	chr3:49761281-49762244	K562	blood:	n/a	n/a
17	BHLHE40	chr3:49760675-49762354	GM12878	blood:	n/a	n/a
18	BRCA1	chr3:49761218-49761809	HepG2	liver:	n/a	n/a
19	CCNT2	chr3:49761175-49761993	K562	blood:	n/a	n/a
20	CEBPD	chr3:49761255-49761897	HepG2	liver:	n/a	n/a
21	CHD1	chr3:49760901-49761372	GM12878	blood:	n/a	n/a
22	CHD1	chr3:49760218-49762139	IMR90	lung:	n/a	n/a
23	CHD2	chr3:49760816-49761920	Hela-S3	cervix:	n/a	n/a
24	CHD2	chr3:49760940-49761876	H1-hESC	embryonic stem cell:	n/a	n/a
25	CHD2	chr3:49760953-49761864	GM12878	blood:	n/a	n/a
26	CHD2	chr3:49761048-49761863	K562	blood:	n/a	n/a
27	CHD2	chr3:49760829-49761156	HepG2	liver:	n/a	n/a
28	CREB1	chr3:49760452-49762540	HepG2	liver:	n/a	n/a
29	CREB1	chr3:49760696-49761883	HepG2	liver:	n/a	n/a
30	CREB1	chr3:49761211-49761620	A549	lung:	n/a	n/a
31	CREB1	chr3:49761107-49761717	ECC-1	luminal epithelium:	n/a	n/a
32	CREB1	chr3:49760695-49762232	GM12878	blood:	n/a	n/a
33	CREB1	chr3:49760626-49761975	H1-hESC	embryonic stem cell:	n/a	n/a
34	CREB1	chr3:49761112-49761737	ECC-1	luminal epithelium:	n/a	n/a
35	CREB1	chr3:49760778-49761792	K562	blood:	n/a	n/a
36	CREB1	chr3:49760807-49761871	A549	lung:	n/a	n/a
37	CREB1	chr3:49760972-49761906	K562	blood:	n/a	n/a
38	CREB1	chr3:49760670-49761866	H1-hESC	embryonic stem cell:	n/a	n/a
39	CTCF	chr3:49760200-49760350	HBMEC	blood vessel:	n/a	n/a
40	CTCF	chr3:49760940-49761090	Hela-S3	cervix:	n/a	n/a
41	CTCF	chr3:49760920-49761070	SK-N-SH_RA	brain:	n/a	n/a
42	CTCF	chr3:49760780-49760930	HepG2	liver:	n/a	n/a
43	CTCF	chr3:49760220-49760370	HEEpiC	esophagus:	n/a	n/a
44	CTCF	chr3:49760980-49761130	SK-N-SH_RA	brain:	n/a	n/a
45	CTCF	chr3:49760940-49761090	HCPEpiC	choroid plexus:	n/a	n/a
46	CTCF	chr3:49760980-49761130	BJ	skin:	n/a	n/a
47	CTCF	chr3:49761006-49761093	GM19240	blood:	n/a	n/a
48	CTCF	chr3:49760980-49761130	HRPEpiC	eye:	n/a	n/a
49	CTCF	chr3:49761008-49761049	MCF-7	breast:	n/a	n/a
50	CTCF	chr3:49761050-49761052	MCF-7	breast:	n/a	n/a

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:49759312-49759362	AG09319	gingival:	n/a
2	chr3:49760915-49760965	NHBE	bronchial:	n/a
3	chr3:49759312-49759362	K562	blood:	n/a
4	chr3:49760249-49760299	GM12892	blood:	n/a
5	chr3:49761040-49761090	GM06990	blood:	n/a
6	chr3:49759312-49759362	H1-hESC	embryonic stem cell:	embryo
7	chr3:49761211-49761261	HEK293	kidney:	embryo
8	chr3:49760249-49760299	K562	blood:	n/a
9	chr3:49761188-49761238	GM19239	blood:	n/a
10	chr3:49760915-49760965	HepG2	liver:	n/a
11	chr3:49761188-49761238	GM12878	blood:	n/a
12	chr3:49760249-49760299	HepG2	liver:	n/a
13	chr3:49761040-49761090	HL-60	blood:	n/a
14	chr3:49761188-49761238	IMR90	lung:	fetal
15	chr3:49761211-49761261	GM12892	blood:	n/a
16	chr3:49761211-49761261	PFSK-1	brain:	n/a
17	chr3:49760915-49760965	Hela-S3	cervix:	n/a
18	chr3:49760915-49760965	HRE	kidney:	n/a
19	chr3:49761040-49761090	Caco-2	colon:	n/a
20	chr3:49761188-49761238	PFSK-1	brain:	n/a
21	chr3:49761188-49761238	HCPEpiC	choroid plexus:	n/a
22	chr3:49761251-49761301	HRE	kidney:	n/a
23	chr3:49759312-49759362	AG04449	skin:	fetal
24	chr3:49759312-49759362	HMEC	breast:	n/a
25	chr3:49761211-49761261	U87	brain:	n/a
26	chr3:49761040-49761090	HRCEpiC	kidney:	n/a
27	chr3:49761211-49761261	Jurkat	blood:	n/a
28	chr3:49761040-49761090	HCF	heart:	n/a
29	chr3:49761251-49761301	GM12891	blood:	n/a
30	chr3:49760915-49760965	ECC-1	luminal epithelium:	n/a
31	chr3:49761251-49761301	HCPEpiC	choroid plexus:	n/a
32	chr3:49759312-49759362	BJ	skin:	n/a
33	chr3:49761211-49761261	NH-A	brain:	n/a
34	chr3:49761251-49761301	ovcar-3	ovarian:	n/a
35	chr3:49761211-49761261	GM19239	blood:	n/a
36	chr3:49761251-49761301	Caco-2	colon:	n/a
37	chr3:49761040-49761090	SK-N-MC	brain:	n/a
38	chr3:49761211-49761261	HCT-116	colon:	n/a
39	chr3:49761188-49761238	ECC-1	luminal epithelium:	n/a
40	chr3:49760915-49760965	HEEpiC	esophagus:	n/a
41	chr3:49761251-49761301	HRPEpiC	eye:	n/a
42	chr3:49761251-49761301	NHBE	bronchial:	n/a
43	chr3:49761040-49761090	HEEpiC	esophagus:	n/a
44	chr3:49761040-49761090	BJ	skin:	n/a
45	chr3:49761040-49761090	HepG2	liver:	n/a
46	chr3:49760915-49760965	GM12892	blood:	n/a
47	chr3:49760249-49760299	T-47D	breast:	n/a
48	chr3:49761251-49761301	H1-hESC	embryonic stem cell:	embryo
49	chr3:49761040-49761090	NH-A	brain:	n/a
50	chr3:49761211-49761261	GM12878	blood:	n/a

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:49761055..49763701-chr3:49764283..49769369,4	MCF-7	breast:
2	chr3:49725817..49728685-chr3:49758847..49761125,3	K562	blood:
3	chr1:244998074..244998716-chr3:49761202..49761902,2	Hela-S3	cervix:
4	chr3:49758578..49761116-chr3:49892581..49894496,2	MCF-7	breast:
5	chr3:49711233..49713399-chr3:49759820..49762894,3	K562	blood:
6	chr3:49760500..49762249-chr3:49875481..49878236,2	MCF-7	breast:
7	chr3:49759986..49763114-chr3:49822374..49825754,4	MCF-7	breast:
8	chr3:49760682..49761597-chr9:19379865..19380804,2	Hela-S3	cervix:
9	chr3:49760862..49761497-chrX:38662870..38663573,2	Hela-S3	cervix:
10	chr3:49759227..49762200-chr3:49837244..49838747,2	MCF-7	breast:
11	chr3:49724901..49726999-chr3:49761086..49763587,3	MCF-7	breast:
12	chr3:49758598..49759428-chr5:130506085..130506631,2	Hela-S3	cervix:
13	chr3:49710197..49713072-chr3:49759630..49762760,3	MCF-7	breast:
14	chr3:49715479..49718306-chr3:49759884..49762675,3	K562	blood:
15	chr3:49711183..49713399-chr3:49759820..49761645,3	K562	blood:
16	chr3:49760150..49762136-chr6:26123661..26125632,2	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AMIGO3-2	chr3:49760687-49760901	NONHSAT089733
2	lnc-AMIGO3-2	chr3:49760165-49760547	NONHSAT089733
3	lnc-RNF123-1	chr3:49760258-49762050	NONHSAT089734
4	lnc-AMIGO3-2	chr3:49761031-49761376	NONHSAT089733

No data

Variant related genes	Relation type
AMIGO3	TF binding region
AMIGO3	CpG island
ENSG00000164068	chromatin interactions
ENSG00000176095	chromatin interactions
ENSG00000238123	chromatin interactions
ENSG00000180573	chromatin interactions
ENSG00000165175	chromatin interactions
ENSG00000180596	chromatin interactions
ENSG00000186687	chromatin interactions
ENSG00000173531	chromatin interactions
ENSG00000183763	chromatin interactions
ENSG00000187492	chromatin interactions
ENSG00000164062	chromatin interactions
ENSG00000203667	chromatin interactions
ENSG00000137154	chromatin interactions

Extended variants
information (count: 165 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:165 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs371254158	chr3:49758529-49758530	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs200170860	chr3:49758548-49758549	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs376781574	chr3:49758594-49758595	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs199933786	chr3:49758630-49758631	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs185245937	chr3:49758684-49758685	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs146833478	chr3:49758685-49758686	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs372013548	chr3:49758704-49758705	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs561212361	chr3:49758706-49758707	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs531884204	chr3:49758714-49758715	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs375162605	chr3:49758741-49758742	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs543835310	chr3:49758749-49758750	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs565233253	chr3:49758758-49758759	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs4768	chr3:49758764-49758765	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
14	rs74944821	chr3:49758780-49758781	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs375127888	chr3:49758787-49758788	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs566389723	chr3:49758810-49758811	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs192049545	chr3:49758820-49758821	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs77498109	chr3:49758831-49758832	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs548803801	chr3:49758850-49758851	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs569409104	chr3:49758856-49758857	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs536698208	chr3:49758927-49758928	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
22	rs367820087	chr3:49759004-49759005	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
23	rs570077731	chr3:49759032-49759033	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs1046598	chr3:49759044-49759045	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs114836451	chr3:49759117-49759118	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs150039459	chr3:49759129-49759130	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs202151835	chr3:49759145-49759146	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs200992117	chr3:49759149-49759150	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs370738203	chr3:49759156-49759157	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs372660006	chr3:49759164-49759165	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs150478395	chr3:49759197-49759198	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs143218268	chr3:49759203-49759204	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs184127567	chr3:49759220-49759221	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs565395732	chr3:49759230-49759231	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
35	rs139041816	chr3:49759238-49759239	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
36	rs147074020	chr3:49759251-49759252	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
37	rs397509422	chr3:49759268-49759269	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs369228844	chr3:49759278-49759279	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs199922550	chr3:49759280-49759281	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
40	rs541447888	chr3:49759281-49759282	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs559784211	chr3:49759315-49759316	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
42	rs372512288	chr3:49759318-49759319	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs201260267	chr3:49759320-49759321	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs372736168	chr3:49759327-49759328	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs533341318	chr3:49759341-49759342	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs71324991	chr3:49759370-49759371	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs371672108	chr3:49759375-49759376	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs55816606	chr3:49759389-49759390	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs147714661	chr3:49759410-49759411	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs144421130	chr3:49759412-49759413	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Kartagener syndrome	16639409	CNVD
Biliary cancer	19435499	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute myeloid leukemia	17268525	CNVD
Salivary gland tumor	18059337	CNVD
Gastric cancer	16891809	CNVD
Night blindness	17160897	CNVD
Cancer	17160897	CNVD
Breast cancer	20409316	CNVD
Lung cancer	17297452	CNVD
Multiple myeloma	16616336	CNVD
Effusion lymphoma	18079361	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Urothelial cell carcinoma	18451213	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medullary thyroid carcinoma	18765511	CNVD
abnormal development	18461090	CNVD
Developmental delay	21147756	CNVD
Urothelial carcinoma	21177765	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:531 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49740600-49759800	Weak transcription	Hela-S3	cervix
2	chr3:49752600-49759800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr3:49753000-49759600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr3:49753600-49759400	Weak transcription	K562	blood
5	chr3:49757000-49759800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr3:49757200-49760000	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr3:49757200-49760200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr3:49757200-49760400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr3:49757200-49760400	Weak transcription	Psoas Muscle	Psoas
10	chr3:49757200-49760400	Weak transcription	Small Intestine	intestine
11	chr3:49757400-49759600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
12	chr3:49757400-49759800	Strong transcription	NHLF	lung
13	chr3:49757400-49760000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
14	chr3:49757400-49760000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr3:49757400-49760000	Weak transcription	Right Atrium	heart
16	chr3:49757400-49760200	Weak transcription	Primary hematopoietic stem cells	blood
17	chr3:49757400-49760200	Weak transcription	Fetal Kidney	kidney
18	chr3:49757400-49760600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr3:49757600-49759600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr3:49757600-49759800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
21	chr3:49757600-49759800	Genic enhancers	Skeletal Muscle Male	skeletal muscle
22	chr3:49757600-49759800	Genic enhancers	Dnd41	blood
23	chr3:49757600-49760200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
24	chr3:49757600-49760200	Weak transcription	Fetal Heart	heart
25	chr3:49757800-49759200	Strong transcription	Brain Anterior Caudate	brain
26	chr3:49757800-49759400	Strong transcription	Lung	lung
27	chr3:49757800-49759600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr3:49757800-49759600	Strong transcription	GM12878-XiMat	blood
29	chr3:49757800-49759800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr3:49757800-49759800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr3:49757800-49759800	Strong transcription	Fetal Stomach	stomach
32	chr3:49757800-49759800	Strong transcription	Placenta Amnion	Placenta Amnion
33	chr3:49757800-49760000	Weak transcription	Brain Angular Gyrus	brain
34	chr3:49757800-49760000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
35	chr3:49757800-49760000	Weak transcription	Fetal Brain Male	brain
36	chr3:49757800-49760000	Strong transcription	Fetal Thymus	thymus
37	chr3:49757800-49760000	Genic enhancers	Stomach Mucosa	stomach
38	chr3:49757800-49760200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr3:49757800-49760200	Strong transcription	Fetal Intestine Small	intestine
40	chr3:49758000-49758600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
41	chr3:49758000-49758800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr3:49758000-49759000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr3:49758000-49759000	Strong transcription	Colonic Mucosa	Colon
44	chr3:49758000-49759600	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr3:49758000-49759600	Strong transcription	Liver	Liver
46	chr3:49758000-49759600	Genic enhancers	Gastric	stomach
47	chr3:49758000-49759600	Strong transcription	Rectal Mucosa Donor 29	rectum
48	chr3:49758000-49759800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr3:49758000-49759800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
50	chr3:49758000-49759800	Strong transcription	Muscle Satellite Cultured Cells	--

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