Variant report

Variant	rs4768
Chromosome Location	chr3:49758764-49758765
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:87)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:87 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:49757537-49762490	GM12878	blood:	n/a	n/a
2	POLR2A	chr3:49758190-49762295	A549	lung:	n/a	n/a
3	POLR2A	chr3:49754469-49762505	GM12892	blood:	n/a	n/a
4	POLR2A	chr3:49757717-49759415	SK-N-SH	brain:	n/a	n/a
5	POLR2A	chr3:49757690-49758945	GM12891	blood:	n/a	n/a
6	POLR2A	chr3:49757841-49761975	PBDE	blood:	n/a	n/a
7	POLR2A	chr3:49755286-49762590	SK-N-MC	brain:	n/a	n/a
8	POLR2A	chr3:49757627-49758822	GM12878	blood:	n/a	n/a
9	POLR2A	chr3:49758111-49758847	GM12891	blood:	n/a	n/a
10	POLR2A	chr3:49757873-49762519	HepG2	liver:	n/a	n/a
11	POLR2A	chr3:49754970-49763587	HepG2	liver:	n/a	n/a
12	POLR2A	chr3:49757939-49758883	K562	blood:	n/a	n/a
13	POLR2A	chr3:49757798-49760188	K562	blood:	n/a	n/a
14	POLR2A	chr3:49757923-49759433	HepG2	liver:	n/a	n/a
15	USF2	chr3:49758550-49759354	Hela-S3	cervix:	n/a	n/a
16	POLR2A	chr3:49757849-49759240	HCT-116	colon:	n/a	n/a
17	POLR2A	chr3:49757760-49765712	HepG2	liver:	n/a	n/a
18	POLR2A	chr3:49757971-49758871	MCF-7	breast:	n/a	n/a
19	POLR2A	chr3:49757632-49759077	GM12891	blood:	n/a	n/a
20	PML	chr3:49758219-49759068	GM12878	blood:	n/a	n/a
21	POLR2A	chr3:49757899-49759232	GM18526	blood:	n/a	n/a
22	POLR2A	chr3:49755382-49762475	MCF-7	breast:	n/a	n/a
23	POLR2A	chr3:49757686-49761996	ECC-1	luminal epithelium:	n/a	n/a
24	POLR2A	chr3:49758185-49758933	HepG2	liver:	n/a	n/a
25	POLR2A	chr3:49757676-49762669	K562	blood:	n/a	n/a
26	POLR2A	chr3:49757729-49759041	GM12878	blood:	n/a	n/a
27	POLR2A	chr3:49757898-49759505	GM12892	blood:	n/a	n/a
28	POLR2A	chr3:49758289-49758937	HCT-116	colon:	n/a	n/a
29	POLR2A	chr3:49757768-49760063	U87	brain:	n/a	n/a
30	POLR2A	chr3:49757859-49758966	SK-N-SH	brain:	n/a	n/a
31	POLR2A	chr3:49758291-49759466	K562	blood:	n/a	n/a
32	POLR2A	chr3:49757795-49760139	GM19193	blood:	n/a	n/a
33	POLR2A	chr3:49755367-49758782	H1-hESC	embryonic stem cell:	n/a	n/a
34	POLR2A	chr3:49757653-49762558	U87	brain:	n/a	n/a
35	POLR2A	chr3:49758669-49758996	K562	blood:	n/a	n/a
36	POLR2A	chr3:49757667-49758835	GM12892	blood:	n/a	n/a
37	POLR2A	chr3:49752889-49762689	GM12892	blood:	n/a	n/a
38	POLR2A	chr3:49758065-49762291	Hela-S3	cervix:	n/a	n/a
39	POLR2A	chr3:49757912-49758895	GM19099	blood:	n/a	n/a
40	POLR2A	chr3:49757964-49759378	GM18505	blood:	n/a	n/a
41	POLR2A	chr3:49758213-49759300	GM15510	blood:	n/a	n/a
42	POLR2A	chr3:49757757-49762595	GM12878	blood:	n/a	n/a
43	POLR2A	chr3:49757826-49758856	Raji	blood:	n/a	n/a
44	POLR2A	chr3:49758270-49759468	PANC-1	pancreas:	n/a	n/a
45	POLR2A	chr3:49757849-49763169	Hela-S3	cervix:	n/a	n/a
46	POLR2A	chr3:49757775-49759748	Hela-S3	cervix:	n/a	n/a
47	POLR2A	chr3:49757724-49762442	HL-60	blood:	n/a	n/a
48	POLR2A	chr3:49757757-49759348	SK-N-MC	brain:	n/a	n/a
49	PBX3	chr3:49755730-49759087	SK-N-SH	brain:	n/a	n/a
50	POLR2A	chr3:49757731-49761986	GM12878	blood:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:49758598..49759428-chr5:130506085..130506631,2	Hela-S3	cervix:
2	chr3:49758578..49761116-chr3:49892581..49894496,2	MCF-7	breast:

No data

Variant related genes	Relation type
AMIGO3	TF binding region
ENSG00000186687	Chromatin interaction
ENSG00000183763	Chromatin interaction

Extended variants
information (count: 110 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:105)

rs_ID	r²[population]
rs10049413	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1049256	1.00[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs10865958	0.87[ASN][1000 genomes]
rs10865959	0.88[CHB][hapmap];0.82[YRI][hapmap];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11130214	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];0.95[TSI][hapmap];0.95[YRI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11130216	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11130218	0.82[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11130219	0.82[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11130221	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1128535	0.84[JPT][hapmap];0.87[ASN][1000 genomes]
rs11709680	0.82[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11710675	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11714957	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11715304	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11716575	0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11717256	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11717463	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11920900	1.00[CEU][hapmap];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12381242	0.96[ASN][1000 genomes]
rs12490656	0.89[ASN][1000 genomes]
rs12496226	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13063621	0.94[ASN][1000 genomes]
rs13084243	0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13085679	0.87[ASN][1000 genomes]
rs13086130	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13086465	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13090611	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1317140	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13316065	1.00[CEU][hapmap];0.80[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1491986	0.82[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1799843	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.97[TSI][hapmap];0.87[YRI][hapmap];0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1799845	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2234385	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2234391	0.96[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs2246832	0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs2247036	0.85[ASN][1000 genomes]
rs2271960	0.96[CHD][hapmap];0.89[GIH][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs2271961	0.96[CHD][hapmap];0.87[GIH][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs2276864	1.00[CEU][hapmap];0.88[CHB][hapmap];0.83[JPT][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2291542	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2307021	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2352967	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2352974	0.96[CHD][hapmap];0.93[GIH][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs2352975	1.00[CEU][hapmap];0.90[CHB][hapmap];0.85[JPT][hapmap];0.87[YRI][hapmap];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34451146	0.94[ASN][1000 genomes]
rs34522271	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34614773	0.96[ASN][1000 genomes]
rs34735338	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35210174	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35261599	0.82[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs35474403	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3749237	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3749240	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs3749241	0.99[ASN][1000 genomes]
rs3811695	0.94[ASN][1000 genomes]
rs3811696	0.96[ASN][1000 genomes]
rs3819325	0.84[ASN][1000 genomes]
rs4519692	0.81[ASN][1000 genomes]
rs4855841	0.93[ASN][1000 genomes]
rs4855850	0.94[ASN][1000 genomes]
rs4855862	0.82[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4855867	0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs57648519	0.94[ASN][1000 genomes]
rs59906301	0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60205400	0.94[ASN][1000 genomes]
rs62260715	0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62260719	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62260729	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6446295	0.96[ASN][1000 genomes]
rs6766836	0.94[ASN][1000 genomes]
rs6775384	0.92[CHD][hapmap];0.81[GIH][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs6785549	0.82[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];0.86[JPT][hapmap];0.94[ASN][1000 genomes]
rs6802890	0.91[CHD][hapmap];0.93[GIH][hapmap];0.93[JPT][hapmap];0.92[ASN][1000 genomes]
rs6804655	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];0.86[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs695238	0.96[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs71324996	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7372725	0.86[ASN][1000 genomes]
rs7372730	0.88[ASN][1000 genomes]
rs7372966	0.95[CHD][hapmap];0.93[GIH][hapmap];0.86[ASN][1000 genomes]
rs7374183	0.95[CHD][hapmap];0.93[GIH][hapmap];0.86[ASN][1000 genomes]
rs7374277	0.86[ASN][1000 genomes]
rs7429353	0.86[ASN][1000 genomes]
rs7431078	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7431106	0.82[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];0.94[ASN][1000 genomes]
rs7618501	0.95[ASN][1000 genomes]
rs7618519	0.96[ASN][1000 genomes]
rs7629936	0.90[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.85[JPT][hapmap];0.95[YRI][hapmap];0.89[ASN][1000 genomes]
rs7634886	0.92[ASN][1000 genomes]
rs7634902	1.00[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs7645061	0.96[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs7648987	0.96[CHD][hapmap];0.91[GIH][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs7649348	1.00[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9814765	0.92[ASN][1000 genomes]
rs9815766	0.82[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9819511	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9850465	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9853458	0.92[ASN][1000 genomes]
rs9855505	0.95[CHD][hapmap];0.93[GIH][hapmap];0.86[ASN][1000 genomes]
rs9859153	0.82[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9865480	0.92[ASN][1000 genomes]
rs9871654	0.93[ASN][1000 genomes]
rs9872864	0.95[CHD][hapmap];0.93[GIH][hapmap];0.86[ASN][1000 genomes]
rs9873183	0.92[ASN][1000 genomes]
rs9876508	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9882639	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508217	chr3:49615446-49769896	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	esv1796352	chr3:49687101-49949959	Genic enhancers Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
3	esv1825898	chr3:49688948-49764849	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
4	esv1796605	chr3:49744556-49760567	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
5	esv3356841	chr3:49758498-49761296	Flanking Active TSS Weak transcription Strong transcription Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs4768	RBM6	Cis_1M	lymphoblastoid	RTeQTL
rs4768	UCN2	cis	cerebellum	SCAN
rs4768	RNF123	cis	cerebellum	SCAN
rs4768	RBM6	cis	Nerve Tibial	GTEx
rs4768	RBM6	cis	parietal	SCAN
rs4768	C3orf54	cis	cerebellum	SCAN
rs4768	WDR6	cis	parietal	SCAN
rs4768	WDR6	cis	Whole Blood	GTEx
rs4768	AMT	cis	cerebellum	SCAN
rs4768	CCDC71	cis	cerebellum	SCAN
rs4768	ALS2CL	cis	cerebellum	SCAN
rs4768	P4HTM	cis	parietal	SCAN

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49740600-49759800	Weak transcription	Hela-S3	cervix
2	chr3:49752600-49759800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr3:49753000-49759600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr3:49753600-49759400	Weak transcription	K562	blood
5	chr3:49757000-49759800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr3:49757200-49760000	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr3:49757200-49760200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr3:49757200-49760400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr3:49757200-49760400	Weak transcription	Psoas Muscle	Psoas
10	chr3:49757200-49760400	Weak transcription	Small Intestine	intestine
11	chr3:49757400-49759600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
12	chr3:49757400-49759800	Strong transcription	NHLF	lung
13	chr3:49757400-49760000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
14	chr3:49757400-49760000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr3:49757400-49760000	Weak transcription	Right Atrium	heart
16	chr3:49757400-49760200	Weak transcription	Primary hematopoietic stem cells	blood
17	chr3:49757400-49760200	Weak transcription	Fetal Kidney	kidney
18	chr3:49757400-49760600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr3:49757600-49759600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr3:49757600-49759800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
21	chr3:49757600-49759800	Genic enhancers	Skeletal Muscle Male	skeletal muscle
22	chr3:49757600-49759800	Genic enhancers	Dnd41	blood
23	chr3:49757600-49760200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
24	chr3:49757600-49760200	Weak transcription	Fetal Heart	heart
25	chr3:49757800-49759200	Strong transcription	Brain Anterior Caudate	brain
26	chr3:49757800-49759400	Strong transcription	Lung	lung
27	chr3:49757800-49759600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr3:49757800-49759600	Strong transcription	GM12878-XiMat	blood
29	chr3:49757800-49759800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr3:49757800-49759800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr3:49757800-49759800	Strong transcription	Fetal Stomach	stomach
32	chr3:49757800-49759800	Strong transcription	Placenta Amnion	Placenta Amnion
33	chr3:49757800-49760000	Weak transcription	Brain Angular Gyrus	brain
34	chr3:49757800-49760000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
35	chr3:49757800-49760000	Weak transcription	Fetal Brain Male	brain
36	chr3:49757800-49760000	Strong transcription	Fetal Thymus	thymus
37	chr3:49757800-49760000	Genic enhancers	Stomach Mucosa	stomach
38	chr3:49757800-49760200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr3:49757800-49760200	Strong transcription	Fetal Intestine Small	intestine
40	chr3:49758000-49758800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
41	chr3:49758000-49759000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr3:49758000-49759000	Strong transcription	Colonic Mucosa	Colon
43	chr3:49758000-49759600	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr3:49758000-49759600	Strong transcription	Liver	Liver
45	chr3:49758000-49759600	Genic enhancers	Gastric	stomach
46	chr3:49758000-49759600	Strong transcription	Rectal Mucosa Donor 29	rectum
47	chr3:49758000-49759800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr3:49758000-49759800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
49	chr3:49758000-49759800	Strong transcription	Muscle Satellite Cultured Cells	--
50	chr3:49758000-49759800	Genic enhancers	Duodenum Mucosa	Duodenum

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