Variant report

Variant rs2234391
Chromosome Location chr3:49842625-49842626
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49840800-49843600 Flanking Active TSS Adipose Nuclei Adipose
2 chr3:49840800-49843600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr3:49841000-49843600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
4 chr3:49841000-49845000 Enhancers Liver Liver
5 chr3:49841200-49843400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
6 chr3:49841200-49843600 Flanking Active TSS Primary hematopoietic stem cells blood
7 chr3:49841200-49843600 Flanking Active TSS HUVEC blood vessel
8 chr3:49841400-49842800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
9 chr3:49841400-49844200 Transcr. at gene 5' and 3' Fetal Stomach stomach
10 chr3:49841400-49845200 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr3:49841400-49845800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
12 chr3:49841400-49845800 Enhancers Primary T helper naive cells from peripheral blood blood
13 chr3:49841400-49846400 Weak transcription Ovary ovary
14 chr3:49841400-49847000 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr3:49841600-49842800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr3:49841600-49843000 Enhancers Pancreas Pancrea
17 chr3:49841600-49843400 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
18 chr3:49841600-49843400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr3:49841600-49843600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr3:49841600-49843600 Enhancers Psoas Muscle Psoas
21 chr3:49841600-49844000 Enhancers Primary T cells from cord blood blood
22 chr3:49841600-49844000 Enhancers Fetal Brain Male brain
23 chr3:49841600-49844400 Enhancers NH-A brain
24 chr3:49841600-49845000 Enhancers Primary mononuclear cells fromperipheralblood Blood
25 chr3:49841600-49845400 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr3:49841600-49845600 Enhancers Primary monocytes fromperipheralblood blood
27 chr3:49841600-49845800 Enhancers Dnd41 blood
28 chr3:49841600-49846000 Enhancers Primary T helper cells PMA-I stimulated --
29 chr3:49841600-49846200 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr3:49841600-49850400 Weak transcription Small Intestine intestine
31 chr3:49841800-49842800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr3:49841800-49842800 Genic enhancers Esophagus oesophagus
33 chr3:49841800-49842800 Active TSS Fetal Brain Female brain
34 chr3:49841800-49842800 Bivalent Enhancer Fetal Thymus thymus
35 chr3:49841800-49842800 Genic enhancers K562 blood
36 chr3:49841800-49843000 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr3:49841800-49843200 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr3:49841800-49843400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr3:49841800-49843400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr3:49841800-49843400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr3:49841800-49843400 Enhancers Rectal Mucosa Donor 29 rectum
42 chr3:49841800-49843600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:49841800-49843600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr3:49841800-49843600 Enhancers Aorta Aorta
45 chr3:49841800-49843600 Enhancers Colon Smooth Muscle Colon
46 chr3:49841800-49844000 Enhancers Primary T cells fromperipheralblood blood
47 chr3:49841800-49844000 Enhancers Primary T helper cells fromperipheralblood blood
48 chr3:49841800-49844000 Enhancers NHDF-Ad bronchial
49 chr3:49841800-49844200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr3:49841800-49844400 Weak transcription Gastric stomach

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