Variant report

Variant	rs1317140
Chromosome Location	chr3:49878652-49878653
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr3:49878580-49878730	WI-38	lung:	n/a	chr3:49878645-49878655
2	CTCF	chr3:49878639-49878879	Gliobla	brain:	n/a	chr3:49878645-49878655
3	CTCF	chr3:49878613-49878923	K562	blood:	n/a	chr3:49878645-49878655
4	RAD21	chr3:49878636-49878980	ECC-1	luminal epithelium:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
5	CTCF	chr3:49878592-49878902	HUVEC	blood vessel:	n/a	chr3:49878645-49878655
6	RAD21	chr3:49878546-49878938	HepG2	liver:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
7	RAD21	chr3:49878488-49879037	A549	lung:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
8	ZNF143	chr3:49878631-49878925	GM12878	blood:	n/a	n/a
9	CTCF	chr3:49878611-49878903	GM12892	blood:	n/a	chr3:49878645-49878655
10	CTCF	chr3:49878623-49878885	MCF-7	breast:	n/a	chr3:49878645-49878655
11	SMC3	chr3:49878590-49878940	Hela-S3	cervix:	n/a	chr3:49878646-49878656
12	MAX	chr3:49878583-49878889	NB4	blood:	n/a	n/a
13	RAD21	chr3:49878431-49879174	HCT-116	colon:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
14	RAD21	chr3:49877757-49879312	SK-N-SH	brain:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
15	SIN3A	chr3:49878516-49878824	H1-hESC	embryonic stem cell:	n/a	n/a
16	CTCF	chr3:49878218-49879098	A549	lung:	n/a	chr3:49878544-49878552 chr3:49878645-49878655 chr3:49878229-49878238 chr3:49878545-49878553
17	CTCF	chr3:49878618-49878859	MCF-7	breast:	n/a	chr3:49878645-49878655
18	CTCF	chr3:49878624-49878909	K562	blood:	n/a	chr3:49878645-49878655
19	CTCF	chr3:49878494-49878926	MCF-7	breast:	n/a	chr3:49878544-49878552 chr3:49878645-49878655 chr3:49878545-49878553
20	CTCF	chr3:49878648-49878871	GM13977	blood:	n/a	n/a
21	RAD21	chr3:49878579-49878952	Hela-S3	cervix:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
22	CTCF	chr3:49878571-49878936	IMR90	lung:	n/a	chr3:49878645-49878655
23	CTCF	chr3:49878619-49878868	MCF-7	breast:	n/a	chr3:49878645-49878655
24	CTCF	chr3:49878625-49878880	A549	lung:	n/a	chr3:49878645-49878655
25	CTCF	chr3:49878640-49878844	SK-N-SH_RA	brain:	n/a	chr3:49878645-49878655
26	CTCF	chr3:49878625-49878890	Hela-S3	cervix:	n/a	chr3:49878645-49878655
27	CTCF	chr3:49878640-49878790	GM12867	blood:	n/a	chr3:49878645-49878655
28	CTCF	chr3:49878640-49878790	HRPEpiC	eye:	n/a	chr3:49878645-49878655
29	CTCF	chr3:49878600-49878750	GM12872	blood:	n/a	chr3:49878645-49878655
30	RAD21	chr3:49878585-49878917	HepG2	liver:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
31	RAD21	chr3:49878563-49878969	H1-hESC	embryonic stem cell:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
32	CTCF	chr3:49878627-49878880	Medullo	brain:	n/a	chr3:49878645-49878655
33	CTCF	chr3:49878626-49878873	A549	lung:	n/a	chr3:49878645-49878655
34	CTCF	chr3:49878620-49878770	GM12871	blood:	n/a	chr3:49878645-49878655
35	CTCF	chr3:49878632-49878861	MCF-7	breast:	n/a	chr3:49878645-49878655
36	CTCF	chr3:49878527-49878926	H1-hESC	embryonic stem cell:	n/a	chr3:49878544-49878552 chr3:49878645-49878655 chr3:49878545-49878553
37	RAD21	chr3:49878520-49878983	H1-hESC	embryonic stem cell:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
38	RAD21	chr3:49878516-49878922	MCF-7	breast:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
39	CTCF	chr3:49878624-49878898	GM12878	blood:	n/a	chr3:49878645-49878655
40	CTCF	chr3:49878561-49878978	HepG2	liver:	n/a	chr3:49878645-49878655
41	RAD21	chr3:49878496-49878993	HepG2	liver:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
42	CTCF	chr3:49878640-49878855	SK-N-SH_RA	brain:	n/a	chr3:49878645-49878655
43	CTCF	chr3:49878620-49878770	A549	lung:	n/a	chr3:49878645-49878655
44	CTCF	chr3:49878580-49878951	K562	blood:	n/a	chr3:49878645-49878655
45	CTCF	chr3:49878629-49878902	GM10248	blood:	n/a	chr3:49878645-49878655
46	CTCF	chr3:49877838-49879078	SK-N-SH	brain:	n/a	chr3:49878544-49878552 chr3:49878645-49878655 chr3:49878229-49878238 chr3:49878545-49878553
47	CTCF	chr3:49878577-49878930	H1-hESC	embryonic stem cell:	n/a	chr3:49878645-49878655
48	CTCF	chr3:49878635-49878856	HepG2	liver:	n/a	chr3:49878645-49878655
49	RAD21	chr3:49878591-49879054	MCF-7	breast:	n/a	chr3:49878753-49878772 chr3:49878756-49878769 chr3:49878646-49878658
50	CTCF	chr3:49878563-49878903	K562	blood:	n/a	chr3:49878645-49878655

No.	Distal block	Cell Line	Cell type
1	chr3:49740990..49741752-chr3:49878503..49879075,3	K562	blood:
2	chr3:49878485..49879205-chr3:49936998..49938153,4	MCF-7	breast:
3	chr3:49876541..49879414-chr3:49940769..49943993,4	K562	blood:
4	chr3:49878396..49879614-chr3:49943242..49944120,4	MCF-7	breast:
5	chr3:49878605..49879280-chr3:49943481..49944261,2	MCF-7	breast:

Variant related genes	Relation type
TRAIP	TF binding region
ENSG00000164078	Chromatin interaction
ENSG00000228008	Chromatin interaction

Extended variants
information (count: 117 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:113)

rs_ID	r²[population]
rs10049413	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1049256	0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs10865958	0.89[ASN][1000 genomes]
rs10865959	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11130214	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.90[TSI][hapmap];0.91[YRI][hapmap];0.81[EUR][1000 genomes]
rs11130216	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.93[MEX][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.81[EUR][1000 genomes]
rs11130218	0.96[CHD][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs11130219	0.96[CHD][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs11130221	0.83[ASN][1000 genomes]
rs1128535	0.88[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs11709573	0.89[CHB][hapmap]
rs11709680	0.96[CHD][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs11710675	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11714957	0.96[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.87[YRI][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11715304	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11716575	0.96[CHD][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs11717256	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11717463	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11920900	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12381242	0.80[ASN][1000 genomes]
rs12634780	0.86[CHB][hapmap]
rs13063621	0.83[ASN][1000 genomes]
rs13084243	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13085679	0.89[ASN][1000 genomes]
rs13086130	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13086465	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13090611	0.88[EUR][1000 genomes]
rs13316065	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1491986	0.96[CHD][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs17657664	0.89[CHB][hapmap]
rs17657688	0.89[CHB][hapmap]
rs1799843	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1799845	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2234385	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2234391	0.81[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2246832	0.81[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2247036	0.92[ASN][1000 genomes]
rs2271960	0.81[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2271961	0.81[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2276864	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2291542	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2307021	1.00[CEU][hapmap];0.90[CHB][hapmap];0.86[JPT][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2352967	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2352969	0.89[CHB][hapmap]
rs2352974	0.81[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2352975	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2352984	0.89[CHB][hapmap]
rs2624819	0.89[CHB][hapmap]
rs2624821	0.89[CHB][hapmap]
rs2681779	0.89[CHB][hapmap]
rs34451146	0.83[ASN][1000 genomes]
rs34522271	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34614773	0.80[ASN][1000 genomes]
rs34735338	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35210174	1.00[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[JPT][hapmap];0.93[MEX][hapmap];0.97[TSI][hapmap];0.87[YRI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35261599	0.96[CHD][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs35474403	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3749237	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3749240	0.90[CHB][hapmap];0.84[JPT][hapmap];0.80[ASN][1000 genomes]
rs3749241	0.80[ASN][1000 genomes]
rs3774759	0.89[CHB][hapmap]
rs3811696	0.80[ASN][1000 genomes]
rs3819325	0.83[ASN][1000 genomes]
rs4519692	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4688688	0.89[CHB][hapmap]
rs4688753	0.89[CHB][hapmap]
rs4768	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4855862	0.96[CHD][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs4855867	0.85[JPT][hapmap];0.80[ASN][1000 genomes]
rs57648519	0.83[ASN][1000 genomes]
rs59906301	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60205400	0.83[ASN][1000 genomes]
rs62260715	0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62260719	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62260729	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6446295	0.82[ASN][1000 genomes]
rs6766836	0.83[ASN][1000 genomes]
rs6774354	0.89[CHB][hapmap]
rs6775384	0.81[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6785549	0.96[CHD][hapmap]
rs6802890	0.81[CHB][hapmap];0.91[CHD][hapmap];0.93[JPT][hapmap];0.83[ASN][1000 genomes]
rs6804655	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[CHD][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.87[YRI][hapmap];0.81[EUR][1000 genomes]
rs695238	0.96[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs71324996	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7372730	0.89[CHB][hapmap]
rs7372966	0.95[CHD][hapmap]
rs7374183	0.95[CHD][hapmap]
rs7430334	0.89[CHB][hapmap]
rs7431078	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7431106	0.95[CHD][hapmap];0.83[ASN][1000 genomes]
rs7615206	0.89[CHB][hapmap]
rs7618501	0.81[ASN][1000 genomes]
rs7618519	0.82[ASN][1000 genomes]
rs7627864	0.89[CHB][hapmap]
rs7629936	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.92[MKK][hapmap];0.91[YRI][hapmap];0.86[ASN][1000 genomes]
rs7634886	0.80[ASN][1000 genomes]
rs7634902	0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs7645061	0.81[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs7648987	0.81[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs7649348	0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs868891	0.89[CHB][hapmap]
rs9814765	0.82[ASN][1000 genomes]
rs9815766	0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs9819511	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9850465	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9853458	0.80[ASN][1000 genomes]
rs9855505	0.95[CHD][hapmap]
rs9859153	0.96[CHD][hapmap];0.86[JPT][hapmap];0.83[ASN][1000 genomes]
rs9865480	0.80[ASN][1000 genomes]
rs9871654	0.82[ASN][1000 genomes]
rs9872864	0.95[CHD][hapmap]
rs9876508	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs9882639	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1796352	chr3:49687101-49949959	Genic enhancers Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
2	nsv834688	chr3:49811115-50019299	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
3	esv1809827	chr3:49812331-49934179	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
4	nsv876766	chr3:49817450-49961780	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases

mRNA abundance (count:13)

SNP	Gene	Cis/trans	Tissue	Source
rs1317140	QRICH1	cis	parietal	SCAN
rs1317140	WDR6	cis	Whole Blood	GTEx
rs1317140	P4HTM	cis	parietal	SCAN
rs1317140	C3orf54	cis	cerebellum	SCAN
rs1317140	ALS2CL	cis	cerebellum	SCAN
rs1317140	CSPG5	cis	cerebellum	SCAN
rs1317140	WDR6	cis	parietal	SCAN
rs1317140	UCN2	cis	cerebellum	SCAN
rs1317140	RBM6	cis	cerebellum	SCAN
rs1317140	RNF123	cis	cerebellum	SCAN
rs1317140	CCDC71	cis	cerebellum	SCAN
rs1317140	RBM6	cis	parietal	SCAN
rs1317140	RBM6	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49861200-49882200	Weak transcription	Primary B cells from cord blood	blood
2	chr3:49861200-49893200	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr3:49863400-49879000	Weak transcription	Fetal Brain Male	brain
4	chr3:49863800-49879000	Weak transcription	NH-A	brain
5	chr3:49863800-49882800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
6	chr3:49864000-49883200	Weak transcription	Colonic Mucosa	Colon
7	chr3:49864000-49893200	Weak transcription	Placenta	Placenta
8	chr3:49864200-49893000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr3:49864600-49882000	Weak transcription	Osteobl	bone
10	chr3:49864800-49880400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr3:49864800-49886000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr3:49865000-49886000	Strong transcription	Dnd41	blood
13	chr3:49865600-49885800	Strong transcription	HUES48 Cell Line	embryonic stem cell
14	chr3:49865600-49885800	Strong transcription	HUES6 Cell Line	embryonic stem cell
15	chr3:49866000-49881000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr3:49867800-49879000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr3:49869000-49883200	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr3:49869200-49879000	Weak transcription	Primary monocytes fromperipheralblood	blood
19	chr3:49869200-49881000	Weak transcription	HMEC	breast
20	chr3:49869400-49879600	Weak transcription	Primary T cells from cord blood	blood
21	chr3:49869400-49880400	Weak transcription	Spleen	Spleen
22	chr3:49869400-49893000	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr3:49869600-49880200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr3:49869800-49879400	Weak transcription	Primary neutrophils fromperipheralblood	blood
25	chr3:49869800-49879600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr3:49870200-49893000	Weak transcription	HSMM	muscle
27	chr3:49870600-49878800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr3:49871200-49886000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
29	chr3:49873600-49885800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr3:49873800-49885800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr3:49874000-49885800	Strong transcription	Thymus	Thymus
32	chr3:49874800-49879400	Strong transcription	GM12878-XiMat	blood
33	chr3:49874800-49882000	Weak transcription	Primary hematopoietic stem cells	blood
34	chr3:49876000-49879400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr3:49876000-49879400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
36	chr3:49876000-49880600	Weak transcription	NHEK	skin
37	chr3:49876000-49880800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr3:49876000-49881800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr3:49876000-49882800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
40	chr3:49876200-49880600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
41	chr3:49876400-49878800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr3:49876400-49879200	Enhancers	Fetal Muscle Trunk	muscle
43	chr3:49876600-49878800	Enhancers	Fetal Muscle Leg	muscle
44	chr3:49876600-49879000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr3:49876600-49879000	Genic enhancers	Primary hematopoietic stem cells short term culture	blood
46	chr3:49876600-49881200	Enhancers	Fetal Heart	heart
47	chr3:49876800-49879000	Enhancers	NHLF	lung
48	chr3:49876800-49879200	Genic enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr3:49876800-49879400	Enhancers	HUVEC	blood vessel
50	chr3:49877000-49880000	Enhancers	Right Ventricle	heart

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