Variant report

Variant rs1062633
Chromosome Location chr3:49924940-49924941
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49918800-49928400 Weak transcription Colonic Mucosa Colon
2 chr3:49919400-49928600 Weak transcription Esophagus oesophagus
3 chr3:49919600-49926400 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr3:49919600-49933400 Weak transcription Brain Inferior Temporal Lobe brain
5 chr3:49919600-49933400 Weak transcription Stomach Mucosa stomach
6 chr3:49919600-49937800 Weak transcription Small Intestine intestine
7 chr3:49919800-49926600 Weak transcription Spleen Spleen
8 chr3:49919800-49933800 Weak transcription Brain Angular Gyrus brain
9 chr3:49920000-49926200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:49920000-49930200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr3:49920000-49943000 Weak transcription Brain Anterior Caudate brain
12 chr3:49920200-49932600 Weak transcription Rectal Smooth Muscle rectum
13 chr3:49920200-49932600 Weak transcription Stomach Smooth Muscle stomach
14 chr3:49920200-49938400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr3:49920400-49938200 Weak transcription Left Ventricle heart
16 chr3:49920600-49938200 Weak transcription Fetal Muscle Leg muscle
17 chr3:49920600-49938200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr3:49921800-49926800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:49921800-49928600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr3:49922600-49935400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:49923800-49925000 Enhancers Fetal Intestine Large intestine
22 chr3:49924000-49925000 Genic enhancers Fetal Intestine Small intestine
23 chr3:49924000-49925200 Strong transcription Duodenum Mucosa Duodenum
24 chr3:49924000-49925200 Strong transcription Rectal Mucosa Donor 31 rectum
25 chr3:49924000-49929400 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr3:49924000-49929400 Strong transcription Lung lung
27 chr3:49924000-49930000 Strong transcription Gastric stomach
28 chr3:49924000-49930200 Strong transcription NHEK skin
29 chr3:49924000-49936000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:49924000-49937600 Strong transcription Fetal Stomach stomach
31 chr3:49924200-49926800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:49924200-49929400 Strong transcription Hela-S3 cervix
33 chr3:49924200-49930000 Strong transcription Sigmoid Colon Sigmoid Colon
34 chr3:49924200-49932600 Weak transcription Pancreas Pancrea
35 chr3:49924400-49926400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr3:49924400-49927400 Weak transcription Fetal Brain Female brain
37 chr3:49924600-49926800 Strong transcription HMEC breast
38 chr3:49924600-49937600 Weak transcription K562 blood
39 chr3:49924800-49925200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr3:49924800-49925800 Weak transcription HepG2 liver
41 chr3:49924800-49938200 Weak transcription Right Ventricle heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links